G196485 (eif3l)


Basic Information

Item Value
gene id G196485
gene name eif3l
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 24947838 ~ 24949032 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU266792
TACgccgtcaattcacacgcaatcgcaaggtaatgtatgtcaatggaggccaaatggtgttgataaacacgctaaaaggcaagtatgcgtcttgataacacgccaataatggcatacggaTTGGTGTGTCATACGTACGCCACTTCGTGAGATTAGTCTGTCTTGCCACACACTCAAAGTCGGTATGCTCTACCTGCGAATGGTGGAGAGCTGGGCCTGCTGCTGCACCTCCTCAGCAAAGACCTTCAGCTGCTGCTGGAAAGGCTCTTTGTGGTAGTTGGGGTGGACGTTGTCATAGTTTGGCACCACAGGGGACAGGAACTTGGGACAGGCGAAGCTGAACTGCTCCTCAAACACCTGCAGGTCTCCTTTCTGCATTCGCAGCATCTTGTCTCCGTACTTCTCCCTCAGCTGGGTGTGGATGCTCTCATCGATGCGCATCGGGTACATGGTGAGAGCGATGGCCAGCAGGCCGTGCATCTGCTCATTTTGTTTGTTAACCATCTCATATTTATACGTCGACCTCTGGAACATGTTTCTTGTCCTCTGGATGTAGAGCAGGATGTTTGCAAAGACTCGAATGGCATCCTGGTAGCGCCTCATCATCAGGTAGGCAAACCCCACATAGTAATATGTAGTGATCTGGCACTCGGGCACACGGGAATACATACT

Function

symbol description
eif3l Enables RNA binding activity. Contributes to translation initiation factor activity. Involved in translational initiation and viral translational termination-reinitiation. Located in membrane. Part of eukaryotic translation initiation factor 3 complex.

NR:

description
PREDICTED: eukaryotic translation initiation factor 3 subunit L

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266792 True 672 lncRNA 0.50 3 24947838 24949032

Neighbor

gene id symbol gene type direction distance location
cdh23 cdh23 coding upstream 3419 24867260 ~ 24944419 (+)
LOC120548496 cdh23,LOC107989583 coding upstream 107091 24742926 ~ 24840747 (+)
fgfr2 fgfr2,LOC102787384 coding upstream 453435 24454868 ~ 24494403 (+)
habp2 NA coding upstream 607654 24336122 ~ 24340184 (+)
LOC120548489 LOC101469311,LOC104948545,LOC103376395,LOC102786201,LOC102303134 coding upstream 611816 24331872 ~ 24336022 (+)
smoc2 smoc2 coding downstream 5680 24954712 ~ 24976820 (+)
lrrfip2 lrrfip2,LOC102790484,LOC103477154 coding downstream 84440 25033472 ~ 25054947 (+)
fam83ha NA coding downstream 126182 25075214 ~ 25084770 (+)
LOC120547833 LOC103359796,LOC104940887,LOC102792006,LOC107088245,LOC101481961 coding downstream 136882 25085914 ~ 25089070 (+)
herc4 herc4 coding downstream 142854 25091886 ~ 25108080 (+)
G196481 NA non-coding upstream 34370 24873802 ~ 24913468 (+)
G196476 NA non-coding upstream 100148 24847114 ~ 24847690 (+)
G196475 NA non-coding upstream 103986 24843443 ~ 24843852 (+)
G196457 NA non-coding upstream 305781 24640699 ~ 24642057 (+)
G196454 NA non-coding upstream 307981 24639414 ~ 24639857 (+)
LOC120547601 NA non-coding downstream 162363 25111395 ~ 25119124 (+)
G196558 NA non-coding downstream 229127 25178159 ~ 25181813 (+)
G196563 NA non-coding downstream 240398 25189430 ~ 25189679 (+)
G196595 mcmbp non-coding downstream 270515 25219547 ~ 25219914 (+)
G196648 pdlim1 non-coding downstream 369234 25318266 ~ 25320869 (+)
G196439 wdr11 other upstream 378671 24564550 ~ 24569167 (+)
LOC120548495 ate1 other upstream 521336 24367954 ~ 24426502 (+)
LOC120547848 LOC103369904,LOC106907288,LOC107081732 other upstream 580239 24357926 ~ 24367599 (+)
klhdc3 klhdc3 other upstream 1096233 23818914 ~ 23851605 (+)
disc1 disc1 other upstream 1336501 23562283 ~ 23611337 (+)
dact2 dact2,LOC103391347 other downstream 59442 25008474 ~ 25013249 (+)
cacul1 cacul1,LOC103374658,LOC102794354 other downstream 190015 25139047 ~ 25144254 (+)
LOC120548229 rab11fip2 other downstream 532799 25481831 ~ 25495505 (+)
zgc:110045 LOC102779765,LOC102305383,LOC100704767,LOC101482925,LOC102197868 other downstream 645464 25594496 ~ 25674906 (+)
prdx3 prdx3 other downstream 664375 25613407 ~ 25620675 (+)

Expression


Co-expression Network