G196558


Basic Information

Item Value
gene id G196558
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 25178159 ~ 25181813 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU266903
acttctttatttttcccatttaaattaaaaattgaTTTCATCCTTTATTATTAAACATCACTTCTATTGTGCAACTTATTTGTATTACTGTCATAAAAGCGAAATGCTGTTACATTCAATATTTTAAGCAACAAATGTATTACATGTCATAAGCGTGCAGTTCAAGCTGAAACATCacctgcttcctgctacgttcTAAAAATGGCACACAAACTTAAAAATGGGAAAAGGGAAAATCCACAATGGAAAAGAATTTAGATTTGTAATGTAGCCTCTGTAAATAACACAAAGTTTGAATTTACTGACACATCAATTAAGGCTTATTCATAACTCATATTGCTGAAATGTAATGATGGCATTTCTACCTAAATTATGTACATTATTTCTTAAGTTTCATAAAGGTTTGTGATCAAGGTTTATATTTACACTCTCAGCCCAAATGACCCTGTTTGTACACAAAAACATCCCCCGGGtctaataaacaaacaaaaatattagCAAGTTTGTCGGCTAGTAGAACAGGAAAAGGAGAGTGAGCTTACAAGGAgtgtaatatactgtacagaATGGCACATGCGCAAATACAATCCAAATGGCAGGACGTCTTTGTGAAAATCCTCGTCACAATTTGCcagttatttttattaaataatttacCTGGAATATACGGAAATATTCTGCAAATACTGAGAAAATTCTGAATACACTAAGAGGCAGAAAAGGTGCCCGCTTCCCTGACAAATCAATGACATATTTAGGAAACCTTTCACtttcataaaataaaaccatCGCAATTTATAGAACGCCTAAAACATTGGACAGTTTGTCTTTACACAAATAAAGGACTAAAGAACAGCATTTTTAATTGTGTAAAACATGATGCAATATCATATGGGGCTGGTTTTGGTGCTAAATGAAGTCTAGTTTTTTCGCAAAAACTCTCCCAACCATTATAAAGAAGTTACTATAAATTAAATGAGGTTATCAAGAAAATATTAAAGATTCAATATCTTTCCAGGAAACCAGCCCCCAGAGTCAGCACACAGTTAGTTACCTTTACAAAGATTGAGGGTTAAGCtgtttttacaatattttctttaTATAGTGAGAATGTGCTATAGCCTTTACTTTGAGACATAGGATTATAAAGGAGTCCAATCTAAGGTGTAACCGAAAATCCATCAGAAGTCTGCAAAGAACATGCTGATCACTCCGatacaaaacatgaaaaaccAAATCTCCTCCCCATttagagttgtgtgtgtgacatttttCTTTGTACACAAAATTTACCCAAGAGATACCACATCCcacttatatatgttttaaagCCACAGTTGTTTATACAAATAGTTTCTTCACATATACTAGAAAGGTAAACTACTGTTCCAGGGCCTCTATTCACAAAGCATTTTTCATTAATATATCAAAATAGGACTGAATTTCTAGCTATGAGCTAAACCTAAGCCCAAATAACTTTTAGTAGGTTGATTCATTCTTGCGGCTCAATGCAGTGTGTAGCACAAATTCATGGTGACCAATCATACCTGCTCAACCTGTGCAACACTGTGTTCGGAATCACACGCAGCCAGCCGCCTGATCGAGTAGGAAGTAGGCAGTACGCAAGTATACAATTCCGAACACAGTCGCTGTCATCACTGTATGCCTTTTTACAAACTAACCTATATAACAAAAATGAACTTAATCAATGCATGaggactcaagtggtgttatgTATTCTGTTgtataaaatgacagaaaaatgcCCCAAGTATGACaagtaaataaacattttgacaAGTCCGTAACAAACactgaaatattaaaaaacacattGGCAAACTGAGACCGGATATTGCTGTAGTTTTGTTCCAGTGAGCTGCTGGAGTAATAAGATGGCTTATAGTAAATGTGCTTTTAACTCCACTAAAATAGCGTGGCTGTTATGTTACGGTTTACATTTCGTCGTTTCTGGATACATTTTTGCTCATGTTTTGAATATGGGAGGGTAACAATTAGTTTCTGAAGGATTCAACTTTTTGATTGTTTGGCCCATTGGTCAACTTATTCAGGGTATGATATGAGGCATGACATGGTCTCTTGTCTCTGTTAAGATAGCTGTAAATCCTCTTTGTCACATACTGGCTATGGGTTTCATGGGACCAAACATTCAAAAAGTTGGCCAAAGACAGTTGTTTGGCTTTATTTCAGATGCCTAAGCACACTTTTCCATACCCAAACTAAATTatcatcaaataaacttttTAAAACTTCTGAGTGAAATGGACACTGTCATTTAAAACATAATTGTTGAACTGGTTGTTTAGAAGCAACTATTAGCTACAAAGGCTTTTTGAATATGGCCCCTGCCCTTTTTCTACCACAGCAGCTGTCCAGGTGAAAGAGTGCTGTGTGGTCTAAAAGGGTTGACAAAACCCTCATGGTACTACACTTAGGTTAGTGCTAGATCACTGCGTTTGGTAGCCAGCCATGCTGAAGTTGGCCAGGTTGGACATGACAGGACCGGGTGGAGCTGCAGCCTGGGCTGACTGAGATCCAAAGCCTTCCACCCAGGCTGGTGACTGGGACTGCTACTCCAAATCCTTGCTGGTTCCACGTCTGGCCGTACATGCTGTAGGAGGGAACTTGCCACCCATTGGTCACATACTGCCcatactgctgctgctcctgctgctgctgctgctgctgctgtggattCCCATAGACTTGGTTCCACTGGCCCCATTGACTGTACTCAACCTTGCTGTGGTTTCTTTGCCATGTCAGGAGATTCTTTGCCCCAGAAGCACTTCACTATGTGTCCTTCAACGGCTGTGCCATTTACTGAAACAATGGCATGGGCAGCACTGTCATGGGAGGAAAACCTTAAAAGGAAAACAGCAGCTTAGCAGTAAGCAAGCAATTCAGAAAATACACAGTAGGAACAATTTGAGCTAACTGTGTTGAGGTGAAGACAAACATAACAGAAAGGGCCACTGACACTATGTCGGGTGCTGACTTGGCCTGTCATCAAGTCATGCAGTTTGCTTTTGTTGACATCTAGAGGCCAAATGCTGCAATGGACTGAGGCACTACCTGATGAAAGAGTATCCTTTCTCTGGGAAAACTCTGATTTCCATTATTTGACCAAACGGTGAGAAGGTCTGTCGCATTAGGTGTTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266903 True 3185 lncRNA 0.39 3 25178159 25181813

Neighbor

gene id symbol gene type direction distance location
pkd2l1 pkd2l1,LOC104965266,LOC104921890,LOC103371634 coding upstream 700 25171104 ~ 25177459 (+)
atoh7 atoh7 coding upstream 9109 25167925 ~ 25169050 (+)
mypn mypn coding upstream 13530 25144557 ~ 25164629 (+)
sirt1 sirt1 coding upstream 39610 25131453 ~ 25138549 (+)
herc4 herc4 coding upstream 70079 25091886 ~ 25108080 (+)
bag3 bag3 coding downstream 10006 25191819 ~ 25197871 (+)
inpp5f inpp5f coding downstream 16726 25198539 ~ 25213504 (+)
LOC120548364 sec23ip coding downstream 40612 25222425 ~ 25232512 (+)
pcbd1 pcbd1,LOC106525612 coding downstream 114450 25296263 ~ 25299446 (+)
neurog3 NA coding downstream 134582 25316395 ~ 25318133 (+)
LOC120547601 NA non-coding upstream 59035 25111395 ~ 25119124 (+)
G196485 eif3l non-coding upstream 229127 24947838 ~ 24949032 (+)
G196481 NA non-coding upstream 264691 24873802 ~ 24913468 (+)
G196476 NA non-coding upstream 330469 24847114 ~ 24847690 (+)
G196475 NA non-coding upstream 334307 24843443 ~ 24843852 (+)
G196563 NA non-coding downstream 7617 25189430 ~ 25189679 (+)
G196595 mcmbp non-coding downstream 37734 25219547 ~ 25219914 (+)
G196648 pdlim1 non-coding downstream 136453 25318266 ~ 25320869 (+)
G196690 NA non-coding downstream 245830 25427643 ~ 25433896 (+)
G196696 NA non-coding downstream 314855 25496668 ~ 25499280 (+)
cacul1 cacul1,LOC103374658,LOC102794354 other upstream 33905 25139047 ~ 25144254 (+)
dact2 dact2,LOC103391347 other upstream 164910 25008474 ~ 25013249 (+)
G196439 wdr11 other upstream 608992 24564550 ~ 24569167 (+)
LOC120548495 ate1 other upstream 751657 24367954 ~ 24426502 (+)
LOC120547848 LOC103369904,LOC106907288,LOC107081732 other upstream 810560 24357926 ~ 24367599 (+)
LOC120548229 rab11fip2 other downstream 300018 25481831 ~ 25495505 (+)
zgc:110045 LOC102779765,LOC102305383,LOC100704767,LOC101482925,LOC102197868 other downstream 412683 25594496 ~ 25674906 (+)
prdx3 prdx3 other downstream 431594 25613407 ~ 25620675 (+)
LOC120548053 LOC103353497,LOC102790632,LOC102299158,LOC102194143,LOC101482614,LOC100706574 other downstream 635438 25817251 ~ 25826429 (+)
stpg4 LOC103353520,LOC101467386,LOC102793681,LOC102299197 other downstream 1353471 26535284 ~ 26548760 (+)

Expression


Co-expression Network