G196563


Basic Information

Item Value
gene id G196563
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 25189430 ~ 25189679 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU266908
tttgtataaGAGAGGAATGTATGTGGGGAAAAAATGCCGCTAAATCACGAGACTGCTGAATTTTTACTCAAAAAATAAATTGCTGTGATACCTCTGGGAGTATGGCAAGGAAACGGAAACATGCTTTACTGTCTATCATATGTCTTTTTGATACTAGCACTAGGGGGCGCCAAAGACAGGAACTTTGCTTTAATGAGTTTTTGgcaagtgcttttattttgaagtaggcAAAGTTTATTAAAGGGCCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266908 True 250 lncRNA 0.38 1 25189430 25189679

Neighbor

gene id symbol gene type direction distance location
pkd2l1 pkd2l1,LOC104965266,LOC104921890,LOC103371634 coding upstream 11971 25171104 ~ 25177459 (+)
atoh7 atoh7 coding upstream 20380 25167925 ~ 25169050 (+)
mypn mypn coding upstream 24801 25144557 ~ 25164629 (+)
sirt1 sirt1 coding upstream 50881 25131453 ~ 25138549 (+)
herc4 herc4 coding upstream 81350 25091886 ~ 25108080 (+)
bag3 bag3 coding downstream 2140 25191819 ~ 25197871 (+)
inpp5f inpp5f coding downstream 8860 25198539 ~ 25213504 (+)
LOC120548364 sec23ip coding downstream 32746 25222425 ~ 25232512 (+)
pcbd1 pcbd1,LOC106525612 coding downstream 106584 25296263 ~ 25299446 (+)
neurog3 NA coding downstream 126716 25316395 ~ 25318133 (+)
G196558 NA non-coding upstream 7617 25178159 ~ 25181813 (+)
LOC120547601 NA non-coding upstream 70306 25111395 ~ 25119124 (+)
G196485 eif3l non-coding upstream 240398 24947838 ~ 24949032 (+)
G196481 NA non-coding upstream 275962 24873802 ~ 24913468 (+)
G196476 NA non-coding upstream 341740 24847114 ~ 24847690 (+)
G196595 mcmbp non-coding downstream 29868 25219547 ~ 25219914 (+)
G196648 pdlim1 non-coding downstream 128587 25318266 ~ 25320869 (+)
G196690 NA non-coding downstream 237964 25427643 ~ 25433896 (+)
G196696 NA non-coding downstream 306989 25496668 ~ 25499280 (+)
LOC120548233 NA non-coding downstream 311850 25501529 ~ 25584577 (+)
cacul1 cacul1,LOC103374658,LOC102794354 other upstream 45176 25139047 ~ 25144254 (+)
dact2 dact2,LOC103391347 other upstream 176181 25008474 ~ 25013249 (+)
G196439 wdr11 other upstream 620263 24564550 ~ 24569167 (+)
LOC120548495 ate1 other upstream 762928 24367954 ~ 24426502 (+)
LOC120547848 LOC103369904,LOC106907288,LOC107081732 other upstream 821831 24357926 ~ 24367599 (+)
LOC120548229 rab11fip2 other downstream 292152 25481831 ~ 25495505 (+)
zgc:110045 LOC102779765,LOC102305383,LOC100704767,LOC101482925,LOC102197868 other downstream 404817 25594496 ~ 25674906 (+)
prdx3 prdx3 other downstream 423728 25613407 ~ 25620675 (+)
LOC120548053 LOC103353497,LOC102790632,LOC102299158,LOC102194143,LOC101482614,LOC100706574 other downstream 627572 25817251 ~ 25826429 (+)
stpg4 LOC103353520,LOC101467386,LOC102793681,LOC102299197 other downstream 1345605 26535284 ~ 26548760 (+)

Expression


Co-expression Network