G196595 (mcmbp)


Basic Information

Item Value
gene id G196595
gene name mcmbp
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 25219547 ~ 25219914 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU266954
CAGAATGCGGCTCCCTCTGCATCTGCGTGTCCATTTCGTCCATGTCGTCGTCTTCCTCGTAGCTACGTTTCTGTCTCGTCGGTGCATACGAGGTGGAAGGAACCACTCTTGCTTGGCTGGAGCCGGCATAGCTCTCTTTCACCCAGGGATTTTCTCCAGGGATTGGCACGCAGTAgaaagtctgtctctctgccgtCACAGTGTTTCTGGAGTCAAAATCCACCTGGAGGTA

Function

symbol description
mcmbp Predicted to enable chromatin binding activity. Predicted to be involved in DNA-dependent DNA replication and sister chromatid cohesion. Predicted to act upstream of or within DNA replication and cell division. Predicted to be located in nucleus. Is expressed in several structures, including alar plate midbrain region; blood; immature eye; nervous system; and ventral mesoderm. Orthologous to human MCMBP (minichromosome maintenance complex binding protein).

NR:

description
PREDICTED: mini-chromosome maintenance complex-binding protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266954 True 232 lncRNA 0.54 2 25219547 25219914

Neighbor

gene id symbol gene type direction distance location
inpp5f inpp5f coding upstream 6043 25198539 ~ 25213504 (+)
bag3 bag3 coding upstream 21676 25191819 ~ 25197871 (+)
pkd2l1 pkd2l1,LOC104965266,LOC104921890,LOC103371634 coding upstream 42088 25171104 ~ 25177459 (+)
atoh7 atoh7 coding upstream 50497 25167925 ~ 25169050 (+)
mypn mypn coding upstream 54918 25144557 ~ 25164629 (+)
LOC120548364 sec23ip coding downstream 2511 25222425 ~ 25232512 (+)
pcbd1 pcbd1,LOC106525612 coding downstream 76349 25296263 ~ 25299446 (+)
neurog3 NA coding downstream 96481 25316395 ~ 25318133 (+)
fam204a fam204a,LOC102781047 coding downstream 194079 25413993 ~ 25430909 (+)
dennd10 fam45a coding downstream 385552 25605466 ~ 25610518 (+)
G196563 NA non-coding upstream 29868 25189430 ~ 25189679 (+)
G196558 NA non-coding upstream 37734 25178159 ~ 25181813 (+)
LOC120547601 NA non-coding upstream 100423 25111395 ~ 25119124 (+)
G196485 eif3l non-coding upstream 270515 24947838 ~ 24949032 (+)
G196481 NA non-coding upstream 306079 24873802 ~ 24913468 (+)
G196648 pdlim1 non-coding downstream 98352 25318266 ~ 25320869 (+)
G196690 NA non-coding downstream 207729 25427643 ~ 25433896 (+)
G196696 NA non-coding downstream 276754 25496668 ~ 25499280 (+)
LOC120548233 NA non-coding downstream 281615 25501529 ~ 25584577 (+)
G196782 NA non-coding downstream 559612 25779526 ~ 25794408 (+)
cacul1 cacul1,LOC103374658,LOC102794354 other upstream 75293 25139047 ~ 25144254 (+)
dact2 dact2,LOC103391347 other upstream 206298 25008474 ~ 25013249 (+)
G196439 wdr11 other upstream 650380 24564550 ~ 24569167 (+)
LOC120548495 ate1 other upstream 793045 24367954 ~ 24426502 (+)
LOC120547848 LOC103369904,LOC106907288,LOC107081732 other upstream 851948 24357926 ~ 24367599 (+)
LOC120548229 rab11fip2 other downstream 261917 25481831 ~ 25495505 (+)
zgc:110045 LOC102779765,LOC102305383,LOC100704767,LOC101482925,LOC102197868 other downstream 374582 25594496 ~ 25674906 (+)
prdx3 prdx3 other downstream 393493 25613407 ~ 25620675 (+)
LOC120548053 LOC103353497,LOC102790632,LOC102299158,LOC102194143,LOC101482614,LOC100706574 other downstream 597337 25817251 ~ 25826429 (+)
stpg4 LOC103353520,LOC101467386,LOC102793681,LOC102299197 other downstream 1315370 26535284 ~ 26548760 (+)

Expression


Co-expression Network