G196788


Basic Information

Item Value
gene id G196788
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 25812215 ~ 25812441 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU267222
gccctacaaaggcaaaGTGCAGTAACTACGCCAAcactgaaactgagaaaaatagCATCAAAGTTTTCATACAGGCCAGCCAAACATGTTGTAGGTACAATAGTGTTGATACTTTTATGTAATACCTTTACAGGAAGGAAAATgttatacataaaaaaacagaccATTGATATGACCTTTGACCCTAAAAATGTAGATACTGCACTCTGCCTTTGTCTAACCTCAAG

Function

NR:

description
uncharacterized protein PF11_0207-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267222 True 227 lncRNA 0.37 1 25812215 25812441

Neighbor

gene id symbol gene type direction distance location
ttl ttl coding upstream 34172 25769647 ~ 25778043 (+)
ikzf1 ikzf1,LOC102780616 coding upstream 53897 25740125 ~ 25758318 (+)
LOC120548498 NA coding upstream 77500 25722609 ~ 25734715 (+)
vwc2 vwc2 coding upstream 104973 25678195 ~ 25707242 (+)
dennd10 fam45a coding upstream 201697 25605466 ~ 25610518 (+)
xpo1b xpo1,LOC104925896,LOC103353500,LOC102296990,LOC103154927,LOC101480205,LOC106952069,LOC103477318 coding downstream 48390 25860831 ~ 25888074 (+)
haao haao coding downstream 149914 25962355 ~ 25969516 (+)
hcar1-3 NA coding downstream 165016 25977457 ~ 25980437 (+)
trnai-uau_2 NA coding downstream 170304 25982745 ~ 25982838 (+)
plekhh2 plekhh2 coding downstream 602083 26414524 ~ 26476727 (+)
G196782 NA non-coding upstream 17807 25779526 ~ 25794408 (+)
LOC120548233 NA non-coding upstream 227638 25501529 ~ 25584577 (+)
G196696 NA non-coding upstream 312935 25496668 ~ 25499280 (+)
G196690 NA non-coding upstream 378319 25427643 ~ 25433896 (+)
G196648 pdlim1 non-coding upstream 491346 25318266 ~ 25320869 (+)
G196841 pex13 non-coding downstream 92279 25904720 ~ 25907869 (+)
G196836 NA non-coding downstream 99320 25911761 ~ 25939959 (+)
G196898 NA non-coding downstream 178027 25990468 ~ 25992621 (+)
LOC120547661 NA non-coding downstream 211479 26023920 ~ 26069456 (+)
G196921 NA non-coding downstream 288051 26100492 ~ 26101022 (+)
zgc:110045 LOC102779765,LOC102305383,LOC100704767,LOC101482925,LOC102197868 other upstream 137309 25594496 ~ 25674906 (+)
prdx3 prdx3 other upstream 191540 25613407 ~ 25620675 (+)
LOC120548229 rab11fip2 other upstream 316710 25481831 ~ 25495505 (+)
cacul1 cacul1,LOC103374658,LOC102794354 other upstream 667961 25139047 ~ 25144254 (+)
dact2 dact2,LOC103391347 other upstream 798966 25008474 ~ 25013249 (+)
LOC120548053 LOC103353497,LOC102790632,LOC102299158,LOC102194143,LOC101482614,LOC100706574 other downstream 4810 25817251 ~ 25826429 (+)
stpg4 LOC103353520,LOC101467386,LOC102793681,LOC102299197 other downstream 722843 26535284 ~ 26548760 (+)
G197053 NA other downstream 850718 26663159 ~ 26663785 (+)
tmem254 NA other downstream 913275 26725716 ~ 26735787 (+)
pwwp2b pwwp2b other downstream 1061774 26874215 ~ 26953805 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000222_00381035_00389557 NA coding CI01000222 null 380007 ~ 389557 (-)