G197053


Basic Information

Item Value
gene id G197053
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 26663159 ~ 26663785 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU267544
GCCAGTGTGGATTACACTTAACAGTTTTATTTGGAATATTAAGACAATGAAGCATAAGCCAAGCACCAAGAGTGACAGCTACAAGTGTCGCATCATACGGCTCTTAAAAATGAACAGGTTATACTGGAaaacaactgtttttttttttttcctctttgaaTGGTGAAGTAGATACACAGAACAGACAGTGAAATGTGAACATGATTAGGCCATTTACACGCTCCAAATCCTACCTGACAGCAaaaggggtggggtgggggagggggaagaaaaaagaaaaagcaaagaaaagcaGAGGAAAATGGAACTGCGATATTCGTCTGACGACAGCTTGGCCAGCCTGTGGCAGTGGCTGCAGCCCGGGACTCAAAAAGGGCTCTTGTGATAGGTCAGAACGAATAAGGCAGTCTGGGAACACGGCGGTGCAGCAGAGAAGACAACCCTTAGTTCCCATCATTGTCAAGTCCCGTTGCCTCGGCACCCACATCCACACAGCAACCAATGTGCACATACAGCATTAAAGTGACAGAGGATTGCAACCATTGTTACACTACACTCCATTGCATATTAGGGAGAAgtaataatgaaaaataattctTTCATACATATTTTTCTGTTTGCATATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267544 True 627 TUCP 0.43 1 26663159 26663785

Neighbor

gene id symbol gene type direction distance location
mcfd2 mcfd2 coding upstream 40589 26619417 ~ 26622570 (+)
calm2a calm1,LOC102778633,LOC102293206,LOC107396020 coding upstream 131433 26527783 ~ 26531726 (+)
si:ch73-105b23.6 LOC104955877 coding upstream 141582 26495508 ~ 26521577 (+)
plekhh2 plekhh2 coding upstream 186432 26414524 ~ 26476727 (+)
trnai-uau_2 NA coding upstream 680321 25982745 ~ 25982838 (+)
LOC120547700 plac9 coding downstream 94548 26758333 ~ 26767338 (+)
LOC120547537 NA coding downstream 201840 26865625 ~ 26873668 (+)
valopa valop,LOC104938804,LOC106940109,LOC107093123 coding downstream 513183 27176968 ~ 27206666 (+)
LOC120548504 kndc1 coding downstream 1144519 27808304 ~ 27878568 (+)
vox NA coding downstream 1222458 27886243 ~ 27887609 (+)
G197035 LOC104925924,LOC104948680,LOC103376065 non-coding upstream 35457 26624635 ~ 26627702 (+)
G197029 NA non-coding upstream 123024 26539844 ~ 26540135 (+)
G197027 NA non-coding upstream 129925 26533032 ~ 26533234 (+)
G196967 NA non-coding upstream 351873 26291118 ~ 26311286 (+)
LOC120548056 NA non-coding upstream 533628 26122891 ~ 26129531 (+)
G197069 LOC103370964,LOC104925911,LOC102295618,LOC103148144 non-coding downstream 76472 26740257 ~ 26746085 (+)
G197084 nkx6-2,LOC102789131 non-coding downstream 400941 27064726 ~ 27104508 (+)
G197087 NA non-coding downstream 452181 27115966 ~ 27116514 (+)
G197089 NA non-coding downstream 478786 27142571 ~ 27142786 (+)
G197137 NA non-coding downstream 601494 27265279 ~ 27265508 (+)
stpg4 LOC103353520,LOC101467386,LOC102793681,LOC102299197 other upstream 114399 26535284 ~ 26548760 (+)
LOC120548053 LOC103353497,LOC102790632,LOC102299158,LOC102194143,LOC101482614,LOC100706574 other upstream 836730 25817251 ~ 25826429 (+)
zgc:110045 LOC102779765,LOC102305383,LOC100704767,LOC101482925,LOC102197868 other upstream 988253 25594496 ~ 25674906 (+)
prdx3 prdx3 other upstream 1042484 25613407 ~ 25620675 (+)
LOC120548229 rab11fip2 other upstream 1167654 25481831 ~ 25495505 (+)
tmem254 NA other downstream 61931 26725716 ~ 26735787 (+)
pwwp2b pwwp2b other downstream 210430 26874215 ~ 26953805 (+)
LOC120547882 inpp5a other downstream 262633 26926418 ~ 27109140 (+)
LOC120548261 LOC102312438,LOC102207415,LOC101470427 other downstream 788165 27451950 ~ 27511592 (+)
LOC120548047 adgra1,LOC103360772 other downstream 891143 27554928 ~ 27781041 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G265046 NA non-coding CI01000063 null 5155129 ~ 5159416 (+)
rainbow trout (Oncorhynchus mykiss) G1834504 NA non-coding NC_048587.1 CM023241.2 15750260 ~ 15752584 (+)
striped catfish (Pangasianodon hypophthalmus) G198051 LOC108274192,LOC108430590,LOC107582782,LOC107673648,LOC107728716 non-coding NC_047606.1 CM018552.1 17431173 ~ 17436952 (+)
tiger barb (Puntius tetrazona) G87207 LOC107582782,LOC107698827,LOC107728716,LOC107550046,LOC107673648,LOC107550045 non-coding NC_056710.1 CM032079.1 10981278 ~ 10987710 (+)