G197069 (LOC103370964,LOC104925911,LOC102295618,LOC103148144)


Basic Information

Item Value
gene id G197069
gene name LOC103370964,LOC104925911,LOC102295618,LOC103148144
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 26740257 ~ 26746085 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU267570
GCTTGTCTTAATGAGATTCCTATAACATAGTTCATACCGTGTATATCATAGTAGTGTATGTTACAGGATGTGTGTGCACGTCATCTCACATTTTATGAATGTGTCATTTCGTCTTTTCTTTTCTAGTGTTAATTTAGTTTAgttcatgttgttgttgtgatcACCGGTCCAGCCAGCATATAGACGGGTAGCGCTCAGTCAGCGTCTTGCGCAGATGATTGCTCTGTGTCTTATCCCTGGTTTCCACCACACACTCCACCTTTGCCTTGAAGAGGTCTGACTTGTCACTTTGTCTCCGATGGCAGACGTCCAACAACCTGACGTCCTCTCTGGACAGGACGTCCAGCAGCTTAGCCATGTCTCCTGGCCATTCTCCCAGCTTCACAGAGAACTTACTGACCCGATCGTCCAGCACCAGGGCCCGGTCCACACACTGCCTCATCAGCTCCAGCTCCATGTTAGCGCTGCTCACCACTACAGCGACCTTTTTGCCTTTCAGTTCCGGTAGCTGTCCAGCCAAGATGGCAGCCAGTCCCATGGCTCCCTCTGTGTCAACAGTGGAGCGTTCAAACTCCTGAAACCGCAGCATCGCCACCAGAGAGTTCTCCTCACTGACAGTGATGACTTTATCTACAAATTTCTTTGCCAGCTGGAAGGTGTCAGCACCCAGGGAGCGCTCCATAAGATCTCCATAGAGTTTCTTATTGGGGTTGCTGTGCAGGTCTTTGATTGGactgtcagttttcagagaTTGTAGCAGCAGAGGGAAACCTTCTGGTTCAACTCCTATGACGAGAACTCGTGAGTTGAGGTGTTTGATGGCTGCAGCTGTGCCAGCCAGTAGACCATACTGTCCAGCTGCAGGAACAACCACTGCATCCAGTTTGGACACTTGCTCATAGATCTCCATGCCAACTGTGC
>TU267571
GCTTGTCTTAATGAGATTCCTATAACATAGTTCATACCGTGTATATCATAGTAGTGTATGTTACAGGATGTGTGTGCACGTCATCTCACATTTTATGAATGTGTCATTTCGTCTTTTCTTTTCTAGTGTTAATTTAGTTTAgttcatgttgttgttgtgatcACCGGTCCAGCCAGCATATAGACGGGTAGCGCTCAGTCAGCGTCTTGCGCAGATGATTGCTCTGTGTCTTATCCCTGGTTTCCACCACACACTCCACCTTTGCCTTGAAGAGGTCTGACTTGTCACTTTGTCTCCGATGGCAGACGTCCAACAACCTGACGTCCTCTCTGGACAGGACGTCCAGCAGCTTAGCCATGTCTCCTGGCCATTCTCCCAGCTTCACAGAGAACTTACTGACCCGATCGTCCAGCACCAGGGCCCGGTCCACACACTGCCTCATCAGCTCCAGCTCCATGTTAGCGCTGCTCACCACTACAGCGACCctacagcagacacacacatacacacacacacgcacacagacacacacacacacacacacacacacaaccacacacagaggAAGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267570 True 921 lncRNA 0.50 7 26740257 26746085
TU267571 False 569 lncRNA 0.49 3 26740257 26743147

Neighbor

gene id symbol gene type direction distance location
mcfd2 mcfd2 coding upstream 117687 26619417 ~ 26622570 (+)
calm2a calm1,LOC102778633,LOC102293206,LOC107396020 coding upstream 208531 26527783 ~ 26531726 (+)
si:ch73-105b23.6 LOC104955877 coding upstream 218680 26495508 ~ 26521577 (+)
plekhh2 plekhh2 coding upstream 263530 26414524 ~ 26476727 (+)
trnai-uau_2 NA coding upstream 757419 25982745 ~ 25982838 (+)
LOC120547700 plac9 coding downstream 12248 26758333 ~ 26767338 (+)
LOC120547537 NA coding downstream 119540 26865625 ~ 26873668 (+)
valopa valop,LOC104938804,LOC106940109,LOC107093123 coding downstream 430883 27176968 ~ 27206666 (+)
LOC120548504 kndc1 coding downstream 1062219 27808304 ~ 27878568 (+)
vox NA coding downstream 1140158 27886243 ~ 27887609 (+)
G197035 LOC104925924,LOC104948680,LOC103376065 non-coding upstream 112555 26624635 ~ 26627702 (+)
G197029 NA non-coding upstream 200122 26539844 ~ 26540135 (+)
G197027 NA non-coding upstream 207023 26533032 ~ 26533234 (+)
G196967 NA non-coding upstream 428971 26291118 ~ 26311286 (+)
LOC120548056 NA non-coding upstream 610726 26122891 ~ 26129531 (+)
G197084 nkx6-2,LOC102789131 non-coding downstream 318641 27064726 ~ 27104508 (+)
G197087 NA non-coding downstream 369881 27115966 ~ 27116514 (+)
G197089 NA non-coding downstream 396486 27142571 ~ 27142786 (+)
G197137 NA non-coding downstream 519194 27265279 ~ 27265508 (+)
G197143 NA non-coding downstream 553083 27299168 ~ 27299994 (+)
tmem254 NA other upstream 4470 26725716 ~ 26735787 (+)
G197053 NA other upstream 76472 26663159 ~ 26663785 (+)
stpg4 LOC103353520,LOC101467386,LOC102793681,LOC102299197 other upstream 191497 26535284 ~ 26548760 (+)
LOC120548053 LOC103353497,LOC102790632,LOC102299158,LOC102194143,LOC101482614,LOC100706574 other upstream 913828 25817251 ~ 25826429 (+)
zgc:110045 LOC102779765,LOC102305383,LOC100704767,LOC101482925,LOC102197868 other upstream 1065351 25594496 ~ 25674906 (+)
pwwp2b pwwp2b other downstream 128130 26874215 ~ 26953805 (+)
LOC120547882 inpp5a other downstream 180333 26926418 ~ 27109140 (+)
LOC120548261 LOC102312438,LOC102207415,LOC101470427 other downstream 705865 27451950 ~ 27511592 (+)
LOC120548047 adgra1,LOC103360772 other downstream 808843 27554928 ~ 27781041 (+)
ccnj ccnj,LOC102785723 other downstream 1548120 28294205 ~ 28302333 (+)

Expression


Co-expression Network