G197087


Basic Information

Item Value
gene id G197087
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 27115966 ~ 27116514 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU267599
CAGGGGCtcagtagctatgtttccatccacatgtttttatctgaattaagtgatatcgaatgaaaaatgccttatggaaacagtaaaattcgatagaatttcatgaatatcgactcaaaggaaatatgttcggtctcatcggattttctcttgatcgatatacggcttatgcgataaacgctgatggaaatgttatttgccgaataaattaatgaattgcgattaagttttaggtcattttatggttgcaacccaccacaaaacgaagaagaagaaatttTAGTTAATTTctgcccagtatttccgctctgtttgcacacttgaaaggtgtcaacaaagacagatggaagtggacgaacgaggagacgagagactttttgaatttaattcacgagcaaaatataacggctattttagatagcaaaaatctaagaaatgccataatttatcaggaactcgcgaaggaaatgaccaacaaaggaCATCctccggagtaaatggaaggcgctcaaacagtgatatacagtacaggccaaaagtttggacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267599 True 549 lncRNA 0.37 1 27115966 27116514

Neighbor

gene id symbol gene type direction distance location
LOC120547537 NA coding upstream 242298 26865625 ~ 26873668 (+)
LOC120547700 plac9 coding upstream 348628 26758333 ~ 26767338 (+)
mcfd2 mcfd2 coding upstream 493396 26619417 ~ 26622570 (+)
calm2a calm1,LOC102778633,LOC102293206,LOC107396020 coding upstream 584240 26527783 ~ 26531726 (+)
si:ch73-105b23.6 LOC104955877 coding upstream 594389 26495508 ~ 26521577 (+)
valopa valop,LOC104938804,LOC106940109,LOC107093123 coding downstream 60454 27176968 ~ 27206666 (+)
LOC120548504 kndc1 coding downstream 691790 27808304 ~ 27878568 (+)
vox NA coding downstream 769729 27886243 ~ 27887609 (+)
vent NA coding downstream 774936 27891450 ~ 27900204 (+)
blnk NA coding downstream 1115281 28231795 ~ 28275999 (+)
G197084 nkx6-2,LOC102789131 non-coding upstream 11458 27064726 ~ 27104508 (+)
G197069 LOC103370964,LOC104925911,LOC102295618,LOC103148144 non-coding upstream 369881 26740257 ~ 26746085 (+)
G197035 LOC104925924,LOC104948680,LOC103376065 non-coding upstream 488264 26624635 ~ 26627702 (+)
G197029 NA non-coding upstream 575831 26539844 ~ 26540135 (+)
G197027 NA non-coding upstream 582732 26533032 ~ 26533234 (+)
G197089 NA non-coding downstream 26057 27142571 ~ 27142786 (+)
G197137 NA non-coding downstream 148765 27265279 ~ 27265508 (+)
G197143 NA non-coding downstream 182654 27299168 ~ 27299994 (+)
G197146 NA non-coding downstream 183596 27300110 ~ 27301368 (+)
G197158 NA non-coding downstream 252722 27369236 ~ 27369931 (+)
LOC120547882 inpp5a other upstream 6826 26926418 ~ 27109140 (+)
pwwp2b pwwp2b other upstream 162161 26874215 ~ 26953805 (+)
tmem254 NA other upstream 380179 26725716 ~ 26735787 (+)
G197053 NA other upstream 452181 26663159 ~ 26663785 (+)
stpg4 LOC103353520,LOC101467386,LOC102793681,LOC102299197 other upstream 567206 26535284 ~ 26548760 (+)
LOC120548261 LOC102312438,LOC102207415,LOC101470427 other downstream 335436 27451950 ~ 27511592 (+)
LOC120548047 adgra1,LOC103360772 other downstream 438414 27554928 ~ 27781041 (+)
ccnj ccnj,LOC102785723 other downstream 1177691 28294205 ~ 28302333 (+)
LOC120548242 ccdc85a,LOC104955469,LOC102783086,LOC102310250,LOC102209339,LOC100696856 other downstream 1996174 29112688 ~ 29177494 (+)
G197531 NA other downstream 2231911 29348425 ~ 29349928 (+)

Expression


Co-expression Network