G197237


Basic Information

Item Value
gene id G197237
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 28004577 ~ 28006159 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU267770
gcttggaccaattctattttccttatatatgcttcctctaggacatattattaggaaacactcaattaattatcactgctacgcagacgatacccaattatatctgtcaattaagccagatgaaagtggtcagttagcaagacttcaaacgtgtgttgaggatataaaatcctggatgacccacaacttcctgatgttaaactcagacaaaacggaagttattgtgataggaccaacgcgccgaacttcgttttcgaagatatagctactctggatggtattgccctggcctccagcactgcggtcagaaatttgggagttatttttgatcaggatatatccttcaacgcccatttaaaacaaacctcaagaatagcctttttccatcttcgtaacattgccaaaatcaggaatatcctgtctcagaatgatgctgaaaaactagtccatgcattcgttacttccagactagattactgcaattccttattatcaggttgcccaaataagtcccttaaggctctccagctgatccagaatgctgcagcacgtgttctgacgagaactaagagaagagatcatatttctcctgtattagcttctctgcattggcttcctgtgaagtctaggatcgaatttaaaatcctcctcctgacttacaaagctctaaatggtcaagcaccatcatacctagaagagctcttagtaccttattgtcccactagggcactgcgctcccggaatgcggggctactcgtggttcctagagtctctggaagtagactgggggccagggccttcagctatcaggctccgcttctgtggaaccagcttccagtctgggttcgaggggcagacaccgtcgccacattcaagagtaaactaaaaaccctcctctttgacaaagcttatagttagggagtgaggagttgcagcgtccacctaacccggcccacctgcttctcctcgtagttagttatgctattacaattctagactgcaggggatgctgtttccttcctatgacacactgagctgctctctcttctctacttgttacttctgtatgcatcctgtcccagaattgcttgttactaatctagctctggggagtttactccccggagtccttatgtttcttcttcgcagagctatgctctgtgattctctgcaaatcccggccgcatcctgctgcatcctgctgcatcctgctgcatccgctgcatcctgctgcatccgccgcatccacccatgctctgcagcgccacgttacatcccgcaacgccctgctgtgatgttcctatgcacagagtagtctggatccggtataggggactgcactactcagtatgacacgatgtgccctgctatgacatgaacttccacgataaccttcgacgtcactgtgacctttaatgtgactattatcgccactgttcatcacacccccaaccggcccgtcagacaccgcctaccaagagtctgggtctgccgaggtttcttcctaaaagggagtttttccttgccactgtcgcgatagccactgctaatgcttgctcttgatggaattactgtaattgttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267770 True 1583 lncRNA 0.47 1 28004577 28006159

Neighbor

gene id symbol gene type direction distance location
vent NA coding upstream 104373 27891450 ~ 27900204 (+)
vox NA coding upstream 116968 27886243 ~ 27887609 (+)
LOC120548504 kndc1 coding upstream 126009 27808304 ~ 27878568 (+)
valopa valop,LOC104938804,LOC106940109,LOC107093123 coding upstream 797911 27176968 ~ 27206666 (+)
LOC120547537 NA coding upstream 1130909 26865625 ~ 26873668 (+)
blnk NA coding downstream 225636 28231795 ~ 28275999 (+)
btaf1 btaf1 coding downstream 314588 28320747 ~ 28350987 (+)
march5 march5 coding downstream 406107 28412266 ~ 28447794 (+)
LOC120547570 kmo coding downstream 481364 28487523 ~ 28508440 (+)
LOC120547955 rmdn2 coding downstream 629169 28635328 ~ 28686068 (+)
G197158 NA non-coding upstream 634646 27369236 ~ 27369931 (+)
G197146 NA non-coding upstream 703209 27300110 ~ 27301368 (+)
G197143 NA non-coding upstream 704583 27299168 ~ 27299994 (+)
G197137 NA non-coding upstream 739069 27265279 ~ 27265508 (+)
G197089 NA non-coding upstream 861791 27142571 ~ 27142786 (+)
G197270 NA non-coding downstream 244599 28250758 ~ 28251552 (+)
LOC120548567 NA non-coding downstream 403311 28409470 ~ 28411483 (+)
G197287 NA non-coding downstream 443421 28449580 ~ 28452009 (+)
G197299 ide,LOC104941703,LOC102291663 non-coding downstream 458987 28465146 ~ 28474917 (+)
G197378 NA non-coding downstream 502819 28508978 ~ 28510477 (+)
LOC120548047 adgra1,LOC103360772 other upstream 223536 27554928 ~ 27781041 (+)
LOC120548261 LOC102312438,LOC102207415,LOC101470427 other upstream 492985 27451950 ~ 27511592 (+)
LOC120547882 inpp5a other upstream 895437 26926418 ~ 27109140 (+)
pwwp2b pwwp2b other upstream 1050772 26874215 ~ 26953805 (+)
tmem254 NA other upstream 1268790 26725716 ~ 26735787 (+)
ccnj ccnj,LOC102785723 other downstream 288046 28294205 ~ 28302333 (+)
LOC120548242 ccdc85a,LOC104955469,LOC102783086,LOC102310250,LOC102209339,LOC100696856 other downstream 1106529 29112688 ~ 29177494 (+)
G197531 NA other downstream 1342266 29348425 ~ 29349928 (+)
LOC120547718 LOC102789565,LOC100690068,LOC101471749,LOC103357097 other downstream 1512782 29518941 ~ 29619016 (+)
LOC120547658 NA other downstream 2147352 30153511 ~ 30201820 (+)

Expression


Co-expression Network