G197378


Basic Information

Item Value
gene id G197378
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 28508978 ~ 28510477 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU267942
cttcctgcaactcccctcttcctggtgtatgtgagtgaaagcgcggttagcgagcttgttacgccagcattctcttaccacaggttccagttactcttttaatgtgtgtaattataatgtgttgagttatttaaacaaacgattggggaaataaacgccgcttgtccgtgagtctcattgatagagcctgcggctggatggagctctatcaatgagagctagctagcctcctcttagaattcctctggaattcacaaaaattcattaacttgaaatcggacaccgttgttagcttaataaaacatttagttagatgttgtgtaagtggcgtgacgaaattcgaactgtaaatatactcgaattacgaccaaaaatgaagctaactagccgcaatctgtacacataggattgaagggacagtcgcagctaacgaaacccttacagctcacaaatattcattaacttgaaatcggacaccgttgttagctttataagacatttagttagatgttgtatagctaagtggtgtgacatgtgtgtaacatgtggtaagagattgctggtgtaacaagctcgctgaccgcgctctcacacacgggccatttagctagcaggaagagaggagatgcaggccctggatctctatcagggcagcggcgtttggtagctagtccattagcccaaacggtgactttgcgcctgtatgaggtgctgtgggctgcagcagccgtgctggagctcaatcgagctcacagcaggccgggtggaaggcaggccgggcggcgaggcagcaacacaggcagctgaactccgacacacagttttacaaaatttgcaattagccatcctttttcgtataacggcccatatttgagctttatatagttgatttctcgcataaaaaagtctcagaagtgaatttggtaaggaaacattgcagtgtcttgaatatgagattctgtcgcgtttctaatgtgtggggattcgctcaaccaatcagcgtgcgtctctacgtgtgtgtacggggctaaggctcaaccaagcagcgcgcagctcatctaaatattcatgagcataccatatttggaagaaaagctcttgttacaaatagggccaaaacacagggatgcataagggccaataaaatatcaaccaggccattttcagcccaactaatgttacataccccattaggagaccataaggaacagtgtgaaataccctatataatcattctatcacccctttaaggctcTGCCAGGCAAATTAATGAGCATAATAATTGTCCTAACCTATACTGGTCATTTTGATTGATAATACAATTTTATAACATTCCACCAGTGTTTAAACTGTTTCTGCTTTCTTTCTGCCCAACATATTTGATTATTGTCATGCTATCCATATCATTTTATGCACAATTttcaatgtgaaaataaaaatatcagtATTAATCTCACAGGTAGGGGCTAAGGAGTTTTGCTTATACTGTAGATTAATTGC
>TU267943
agccatcctttttcgtataacggcccatatttgagctttatatagttgatttctcgcataaaaaagtctcagaagtgaatttggtaaggaaacattgcagtgtcttgaatatgagattctgtcgcgtttctaatgtgtggggattcgctcaaccaatcagcgtgcgtctctacgtgtgtgtacggggctaaggctcaaccaagcagcgcgcagctcatctaaatattcatgagcataccatatttggaagaaaagctcttgttacaaatagggccaaaacacagggatgcataagggccaataaaatatcaaccaggccattttcagcccaactaatgttacataccccattaggagaccataaggaacagtgtgaaataccctatataatcattctatcacccctttaaggctcTGCCAGGCAAATTAATGAGCATAATAATTGTCCTAACCTATACTGGTCATTTTGATTGATAATACAATTTTATAACATTCCACCAGTGTTTAAACTGTTTCTGCTTTCTTTCTGCCCAACATATTTGATTATTGTCATGCTATCCATATCATTTTATGCACAATTttcaatgtgaaaataaaaatatcagtATTAATCTCACAGGTAGGGGCTAAGGAGTTTTGCTTATACTGTAGATTAATTGC

Function

GO: NA

KEGG:

id description
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU267942 True 1500 lncRNA 0.43 1 28508978 28510477
TU267943 False 660 lncRNA 0.38 1 28509818 28510477

Neighbor

gene id symbol gene type direction distance location
LOC120547570 kmo coding upstream 538 28487523 ~ 28508440 (+)
march5 march5 coding upstream 61184 28412266 ~ 28447794 (+)
btaf1 btaf1 coding upstream 157991 28320747 ~ 28350987 (+)
blnk NA coding upstream 232979 28231795 ~ 28275999 (+)
vent NA coding upstream 608774 27891450 ~ 27900204 (+)
LOC120547955 rmdn2 coding downstream 124851 28635328 ~ 28686068 (+)
LOC120547521 nanp coding downstream 253920 28764397 ~ 28770079 (+)
LOC120548038 tuba1c,LOC108255233,LOC103148207,LOC108247626,LOC106920718,LOC101079871,LOC101066234 coding downstream 276569 28787046 ~ 28789905 (+)
si:dkey-187a12.4 LOC104933667,LOC104950525 coding downstream 280307 28790784 ~ 28801376 (+)
LOC120547961 LOC103372209,LOC104933668 coding downstream 307356 28817833 ~ 28854223 (+)
G197299 ide,LOC104941703,LOC102291663 non-coding upstream 34061 28465146 ~ 28474917 (+)
G197287 NA non-coding upstream 56969 28449580 ~ 28452009 (+)
LOC120548567 NA non-coding upstream 97495 28409470 ~ 28411483 (+)
G197270 NA non-coding upstream 257426 28250758 ~ 28251552 (+)
G197237 NA non-coding upstream 502819 28004577 ~ 28006159 (+)
G197409 NA non-coding downstream 196406 28706883 ~ 28707205 (+)
G197439 NA non-coding downstream 356825 28867302 ~ 28867503 (+)
G197441 NA non-coding downstream 363701 28874178 ~ 28874530 (+)
G197446 LOC100696947,LOC101488034,LOC102786940,LOC102291530 non-coding downstream 378991 28889468 ~ 28891827 (+)
G197514 NA non-coding downstream 694791 29205268 ~ 29205577 (+)
ccnj ccnj,LOC102785723 other upstream 206645 28294205 ~ 28302333 (+)
LOC120548047 adgra1,LOC103360772 other upstream 727937 27554928 ~ 27781041 (+)
LOC120548261 LOC102312438,LOC102207415,LOC101470427 other upstream 997386 27451950 ~ 27511592 (+)
LOC120547882 inpp5a other upstream 1399838 26926418 ~ 27109140 (+)
pwwp2b pwwp2b other upstream 1555173 26874215 ~ 26953805 (+)
LOC120548242 ccdc85a,LOC104955469,LOC102783086,LOC102310250,LOC102209339,LOC100696856 other downstream 602211 29112688 ~ 29177494 (+)
G197531 NA other downstream 837948 29348425 ~ 29349928 (+)
LOC120547718 LOC102789565,LOC100690068,LOC101471749,LOC103357097 other downstream 1008464 29518941 ~ 29619016 (+)
LOC120547658 NA other downstream 1643034 30153511 ~ 30201820 (+)
G197999 NA other downstream 2723887 31234364 ~ 31234723 (+)

Expression


Co-expression Network