G197571


Basic Information

Item Value
gene id G197571
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 29470012 ~ 29470956 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU268185
cctagacctgccaacaaatgcctgttgttagaagaaaacaaaacaccccACACTTTCTTAGCCCtgtagaccagtggttctcaaactttttgacatcaaggacccctaaacggACAGAAACTAGACTACGGACCCCCATTTGATTCGATTTTGTCCATGGGTccccatctgataggatttttgcttttagatgttttattacagaaattctatgaaacattttgttaaatggatggaattatagtgaaaataagttatttcactttttgctggggaccccctggaaTCCCCTCAAGGACCCCTGGGTGTCCCTGTaccccactttgagaaccactgctgcAGACCATTTACTGACCTCAATCAAGCCACTTCCCTCAGAAGCAGCTGTCCTGCCAAactcctgcttctctctctctctctccctctctctcaaaaTATATCTTCCAGTATCCATCTGCTCAATAAATTGAAGGATATAATCATGCAATAGCATTAACAGTGACACTATGAtatttagttttcagtgacaacatTCTGTGGCGACTGATATTGTTTTTAATACTATAGAGATAGCATGCCATATTAATGGCAAAGAATAGAGAACTTCGGATAGGTTAgttatttcttgtatttcactCATTCACTCTAGCTAGACTATTGTTTTATATAGCCAGCTAAAATATCCCTTTAGCCACCTCAAGTAAACGTAGCTAAAATTAAGCAAATAAAAGTCATTAACAACTTAAaatttcactctgtatcactCATTGTGTATGCAGTAgcaagttcagaccaaagaacaggcatgaaaacgggtcaggggtgaaaaaggtgagaaggatattacgcCTCTAGGCaggtccgggggcatgctcccccggaagaaaattttaaatattccatattttaaagcatcaatctgatgcattttgagatgcatttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268185 True 945 lncRNA 0.39 1 29470012 29470956

Neighbor

gene id symbol gene type direction distance location
LOC120547961 LOC103372209,LOC104933668 coding upstream 615789 28817833 ~ 28854223 (+)
si:dkey-187a12.4 LOC104933667,LOC104950525 coding upstream 668636 28790784 ~ 28801376 (+)
LOC120548038 tuba1c,LOC108255233,LOC103148207,LOC108247626,LOC106920718,LOC101079871,LOC101066234 coding upstream 680107 28787046 ~ 28789905 (+)
LOC120547521 nanp coding upstream 699933 28764397 ~ 28770079 (+)
LOC120547955 rmdn2 coding upstream 783944 28635328 ~ 28686068 (+)
LOC120547808 NA coding downstream 86307 29557263 ~ 29558335 (+)
LOC120547721 LOC103357097 coding downstream 157775 29628731 ~ 29632761 (+)
LOC120548236 LOC103357099,LOC103387711 coding downstream 175767 29646723 ~ 29655051 (+)
pcca pcca coding downstream 188456 29659412 ~ 29698143 (+)
cdt1 NA coding downstream 485764 29956720 ~ 29963090 (+)
G197568 NA non-coding upstream 11576 29457418 ~ 29458436 (+)
G197532 NA non-coding upstream 60025 29351706 ~ 29409987 (+)
G197530 NA non-coding upstream 87406 29332515 ~ 29382606 (+)
G197537 NA non-coding upstream 104526 29360009 ~ 29365486 (+)
G197528 LOC106513149,LOC101169589,LOC103370318 non-coding upstream 122514 29315299 ~ 29347498 (+)
G197635 NA non-coding downstream 233131 29704087 ~ 29705013 (+)
G197636 NA non-coding downstream 237787 29708743 ~ 29710005 (+)
G197654 NA non-coding downstream 297520 29768476 ~ 29779051 (+)
G197679 NA non-coding downstream 498834 29969790 ~ 29977939 (+)
G197686 NA non-coding downstream 523625 29994581 ~ 30000931 (+)
G197531 NA other upstream 120084 29348425 ~ 29349928 (+)
LOC120548242 ccdc85a,LOC104955469,LOC102783086,LOC102310250,LOC102209339,LOC100696856 other upstream 292518 29112688 ~ 29177494 (+)
ccnj ccnj,LOC102785723 other upstream 1167679 28294205 ~ 28302333 (+)
LOC120548047 adgra1,LOC103360772 other upstream 1688971 27554928 ~ 27781041 (+)
LOC120548261 LOC102312438,LOC102207415,LOC101470427 other upstream 1958420 27451950 ~ 27511592 (+)
LOC120547718 LOC102789565,LOC100690068,LOC101471749,LOC103357097 other downstream 47985 29518941 ~ 29619016 (+)
LOC120547658 NA other downstream 682555 30153511 ~ 30201820 (+)
G197999 NA other downstream 1763408 31234364 ~ 31234723 (+)
G198185 NA other downstream 3322332 32793288 ~ 32794661 (+)
G198245 rab1a,LOC104962072,LOC102231865 other downstream 3491432 32962388 ~ 32965074 (+)

Expression


Co-expression Network