G197635


Basic Information

Item Value
gene id G197635
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 29704087 ~ 29705013 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU268270
GAGCAAGTCAGCATGAAGATATTGTAAAAACACTGGTTTTGTGTCCTTTAAACAGTAATACATTGATAATGTAAGTCAGCCAGCCCCCAGCAGTTAAAGGTGACAGCTGGGAAGAGAACTAACTCCCCACAGCTCTGTTCTTAGCTTTCCATACTTAAATGTAGTAGCAAAGACGGAGGTCGCAAGAAGCATTCTGGCTTTCtatgaataattattttttttttattctcaccAGATGGAGTTTAAAATGAAGAAAAGCTGAATAAATATACATCCAAAAGGCAGAATTCCTCCCATGATGATACCAGGGAAAGGCTTCGTGTAGAATGACTGCTCTGGGACTTGACGAGGAATCTGATTGGTCCGCACTGGGTGCTCAATACCCTTAATGTCTTCTTGAAGCCAAAGTATGCTCCTATAAAGGTAAGTGGCACTGAGATACAGAACCAAAGAGCCAATATGGCTACCAGAGTCCCAAATGGCATGGCTGCTGAAGACCCTTCACCCCACAGGATCAAGTTCATCACAAAGAAATCTGCAAATACCACCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268270 True 551 lncRNA 0.42 2 29704087 29705013

Neighbor

gene id symbol gene type direction distance location
pcca pcca coding upstream 5944 29659412 ~ 29698143 (+)
LOC120548236 LOC103357099,LOC103387711 coding upstream 49036 29646723 ~ 29655051 (+)
LOC120547721 LOC103357097 coding upstream 71326 29628731 ~ 29632761 (+)
LOC120547808 NA coding upstream 145752 29557263 ~ 29558335 (+)
LOC120547961 LOC103372209,LOC104933668 coding upstream 849864 28817833 ~ 28854223 (+)
cdt1 NA coding downstream 251707 29956720 ~ 29963090 (+)
nvl NA coding downstream 562775 30267788 ~ 30336160 (+)
sertad2b sertad2,LOC104932742 coding downstream 801041 30506054 ~ 30600609 (+)
slc1a4 slc1a4,LOC102791775 coding downstream 920617 30625630 ~ 30671184 (+)
LOC120548109 LOC102195401,LOC103353517,LOC102300597,LOC106939791 coding downstream 1006560 30711573 ~ 31005023 (+)
G197571 NA non-coding upstream 233131 29470012 ~ 29470956 (+)
G197568 NA non-coding upstream 245651 29457418 ~ 29458436 (+)
G197532 NA non-coding upstream 294100 29351706 ~ 29409987 (+)
G197530 NA non-coding upstream 321481 29332515 ~ 29382606 (+)
G197537 NA non-coding upstream 338601 29360009 ~ 29365486 (+)
G197636 NA non-coding downstream 3730 29708743 ~ 29710005 (+)
G197654 NA non-coding downstream 63463 29768476 ~ 29779051 (+)
G197679 NA non-coding downstream 264777 29969790 ~ 29977939 (+)
G197686 NA non-coding downstream 289568 29994581 ~ 30000931 (+)
G197695 NA non-coding downstream 359757 30064770 ~ 30066529 (+)
LOC120547718 LOC102789565,LOC100690068,LOC101471749,LOC103357097 other upstream 85071 29518941 ~ 29619016 (+)
G197531 NA other upstream 354159 29348425 ~ 29349928 (+)
LOC120548242 ccdc85a,LOC104955469,LOC102783086,LOC102310250,LOC102209339,LOC100696856 other upstream 526593 29112688 ~ 29177494 (+)
ccnj ccnj,LOC102785723 other upstream 1401754 28294205 ~ 28302333 (+)
LOC120548047 adgra1,LOC103360772 other upstream 1923046 27554928 ~ 27781041 (+)
LOC120547658 NA other downstream 448498 30153511 ~ 30201820 (+)
G197999 NA other downstream 1529351 31234364 ~ 31234723 (+)
G198185 NA other downstream 3088275 32793288 ~ 32794661 (+)
G198245 rab1a,LOC104962072,LOC102231865 other downstream 3257375 32962388 ~ 32965074 (+)
slc2a15a LOC103367959,LOC104935160,LOC103476520,LOC106961144,LOC103155793 other downstream 3452716 33157729 ~ 33199862 (+)

Expression


Co-expression Network