G197636


Basic Information

Item Value
gene id G197636
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 29708743 ~ 29710005 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU268271
AACCACTGGATGTTGGTGTGAGGCATTGACTCCAAGATGTAGTCCCATCTAGACGCCCAACGAATATTCTTGtcttcctacacacacacacacACATTTTCTTGGGGAAATACTGACTATTTCTGATAGCCCGAAGTTGAGTGCGTTCACTCTACTTCATCTTTTGTACCAATTATTGTAAATTACACTACAAATTTTGGTGCCCCGCTACAGAGAACAAAGTTGAAACAAGGCAGAGcacatgacaaaaacatggacaGCATTAAACACACCAGGACGATACTATTGTACTAACCACAAAGTTGATAGAGTAGGTGTATGGGATGTTGAACACtcccgtttgtttgtttttcaggaaCTTTGGCCCTCCAGTACAATCAGGGCTGTCATTAGGGTTTTCATAGctggacagagaaagagagacaaaagaaaTAGATCAAAGTAGCAAAGTCCACCAGTTATCTAATTTGCATATTGAGATCTAATTACAATACAGGCAGAATCTACAAGAACACTAATTAATACCACACTATTCAACTAGTCTGTGGACAGCATCATTAGTGTCCATAAAAAGTTCT

Function

NR:

description
solute carrier family 45 member 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268271 True 578 lncRNA 0.40 2 29708743 29710005

Neighbor

gene id symbol gene type direction distance location
pcca pcca coding upstream 10600 29659412 ~ 29698143 (+)
LOC120548236 LOC103357099,LOC103387711 coding upstream 53692 29646723 ~ 29655051 (+)
LOC120547721 LOC103357097 coding upstream 75982 29628731 ~ 29632761 (+)
LOC120547808 NA coding upstream 150408 29557263 ~ 29558335 (+)
LOC120547961 LOC103372209,LOC104933668 coding upstream 854520 28817833 ~ 28854223 (+)
cdt1 NA coding downstream 246715 29956720 ~ 29963090 (+)
nvl NA coding downstream 557783 30267788 ~ 30336160 (+)
sertad2b sertad2,LOC104932742 coding downstream 796049 30506054 ~ 30600609 (+)
slc1a4 slc1a4,LOC102791775 coding downstream 915625 30625630 ~ 30671184 (+)
LOC120548109 LOC102195401,LOC103353517,LOC102300597,LOC106939791 coding downstream 1001568 30711573 ~ 31005023 (+)
G197635 NA non-coding upstream 3730 29704087 ~ 29705013 (+)
G197571 NA non-coding upstream 237787 29470012 ~ 29470956 (+)
G197568 NA non-coding upstream 250307 29457418 ~ 29458436 (+)
G197532 NA non-coding upstream 298756 29351706 ~ 29409987 (+)
G197530 NA non-coding upstream 326137 29332515 ~ 29382606 (+)
G197654 NA non-coding downstream 58471 29768476 ~ 29779051 (+)
G197679 NA non-coding downstream 259785 29969790 ~ 29977939 (+)
G197686 NA non-coding downstream 284576 29994581 ~ 30000931 (+)
G197695 NA non-coding downstream 354765 30064770 ~ 30066529 (+)
G197739 NA non-coding downstream 419880 30129885 ~ 30130223 (+)
LOC120547718 LOC102789565,LOC100690068,LOC101471749,LOC103357097 other upstream 89727 29518941 ~ 29619016 (+)
G197531 NA other upstream 358815 29348425 ~ 29349928 (+)
LOC120548242 ccdc85a,LOC104955469,LOC102783086,LOC102310250,LOC102209339,LOC100696856 other upstream 531249 29112688 ~ 29177494 (+)
ccnj ccnj,LOC102785723 other upstream 1406410 28294205 ~ 28302333 (+)
LOC120548047 adgra1,LOC103360772 other upstream 1927702 27554928 ~ 27781041 (+)
LOC120547658 NA other downstream 443506 30153511 ~ 30201820 (+)
G197999 NA other downstream 1524359 31234364 ~ 31234723 (+)
G198185 NA other downstream 3083283 32793288 ~ 32794661 (+)
G198245 rab1a,LOC104962072,LOC102231865 other downstream 3252383 32962388 ~ 32965074 (+)
slc2a15a LOC103367959,LOC104935160,LOC103476520,LOC106961144,LOC103155793 other downstream 3447724 33157729 ~ 33199862 (+)

Expression


Co-expression Network