G197654


Basic Information

Item Value
gene id G197654
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 29768476 ~ 29779051 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU268293
CGCCATTTTCAGCTTTTGTACGCACATACACTTTTGGTATGGATCCTATAGGTAACGTTTTAAAATGAGACTAGTGTTCCTACCTGTAAGCTGTACTTGTCTTGACTAGACAGTAGGCTTTAGTAGAAGAAGACATGACACGGTGCTTCAGTAAGCCCACATGCTACCCTAGCTTTGCGTTTATATGGTTGCCCCGCTTTGCTGTAGTCCAgccaaaaatgtcacaaaaccTGCTCTCaccccaaaagcccaaaaaccAAAGACGATGATGATGAAGTCAATGACATCAGTCAGGAACATGAACGCATAGACATCTGTGGCAGTCCGATACTCAGCATGTAGAATACCTCGGAAGAATCCCTGTGCCGGCCTGTAAACACTCTGAATACCAGAGacgaaaacatgttttatcttGTGTCCCACAGCCAGCAATCTCTGACTGGCTGCCTCTTTCCTCCTGCCTTTCGGCTTTTTCTTCACTGGTTCTTCACAGGGATCTGTAGTTTCAGCTGTGGGCTCCTCTTTGCTGCGCTGTTGTTtgggttgttttgttttcttgcgGAAGCGCATACCGCTGCTTTTCTTTGGGGCTTCTTCTATCACCTGCTCTTCGTCTCCCTCCATCTTATCCTCCCTCGGCCTGCTGGGAAAACTCAACATGTCCTTCAGCCCAGACGGAGTTTCCTGTCCATCTTTTGAACCACTGGGTGCTGGTTCATCTGCAGGAGGTTGTgtggtagcagcagcagagctggTACTCGGTTCAACATAGTCCACAATATCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268293 True 785 lncRNA 0.48 3 29768476 29779051

Neighbor

gene id symbol gene type direction distance location
pcca pcca coding upstream 70333 29659412 ~ 29698143 (+)
LOC120548236 LOC103357099,LOC103387711 coding upstream 113425 29646723 ~ 29655051 (+)
LOC120547721 LOC103357097 coding upstream 135715 29628731 ~ 29632761 (+)
LOC120547808 NA coding upstream 210141 29557263 ~ 29558335 (+)
LOC120547961 LOC103372209,LOC104933668 coding upstream 914253 28817833 ~ 28854223 (+)
cdt1 NA coding downstream 177669 29956720 ~ 29963090 (+)
nvl NA coding downstream 488737 30267788 ~ 30336160 (+)
sertad2b sertad2,LOC104932742 coding downstream 727003 30506054 ~ 30600609 (+)
slc1a4 slc1a4,LOC102791775 coding downstream 846579 30625630 ~ 30671184 (+)
LOC120548109 LOC102195401,LOC103353517,LOC102300597,LOC106939791 coding downstream 932522 30711573 ~ 31005023 (+)
G197636 NA non-coding upstream 58471 29708743 ~ 29710005 (+)
G197635 NA non-coding upstream 63463 29704087 ~ 29705013 (+)
G197571 NA non-coding upstream 297520 29470012 ~ 29470956 (+)
G197568 NA non-coding upstream 310040 29457418 ~ 29458436 (+)
G197532 NA non-coding upstream 358489 29351706 ~ 29409987 (+)
G197679 NA non-coding downstream 190739 29969790 ~ 29977939 (+)
G197686 NA non-coding downstream 215530 29994581 ~ 30000931 (+)
G197695 NA non-coding downstream 285719 30064770 ~ 30066529 (+)
G197739 NA non-coding downstream 350834 30129885 ~ 30130223 (+)
LOC120547657 NA non-coding downstream 367772 30146823 ~ 30150716 (+)
LOC120547718 LOC102789565,LOC100690068,LOC101471749,LOC103357097 other upstream 149460 29518941 ~ 29619016 (+)
G197531 NA other upstream 418548 29348425 ~ 29349928 (+)
LOC120548242 ccdc85a,LOC104955469,LOC102783086,LOC102310250,LOC102209339,LOC100696856 other upstream 590982 29112688 ~ 29177494 (+)
ccnj ccnj,LOC102785723 other upstream 1466143 28294205 ~ 28302333 (+)
LOC120548047 adgra1,LOC103360772 other upstream 1987435 27554928 ~ 27781041 (+)
LOC120547658 NA other downstream 374460 30153511 ~ 30201820 (+)
G197999 NA other downstream 1455313 31234364 ~ 31234723 (+)
G198185 NA other downstream 3014237 32793288 ~ 32794661 (+)
G198245 rab1a,LOC104962072,LOC102231865 other downstream 3183337 32962388 ~ 32965074 (+)
slc2a15a LOC103367959,LOC104935160,LOC103476520,LOC106961144,LOC103155793 other downstream 3378678 33157729 ~ 33199862 (+)

Expression


Co-expression Network