G197686


Basic Information

Item Value
gene id G197686
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 29994581 ~ 30000931 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU268327
ttgagcttgaggatttaataaacaATAATCCATACAAAAAGAGTCCTGAAGATAGCaggcaaaatacaaaaacaggaACAGGCAGAATCCCAAAAACAGGGACAGGCAGAATCCCAAAGACAGGAATCACAAAAATACCAGGAACACCGAGACCAACGGGGACGACTACACAAACTCTCACAGAAAGCAATACAATGacctgacaacagacaaaggaAACACAGATACCTAAATACAAGAGTTAACGAGCAAACATGGGAGAGGGAACAGGTGAAAGACATCAGGGCAGAGCAAAGAATCataacacaggaagtaaaacaagacaacacaTTCTTATGTGTTTCACTGTtctcttcaaaaaaaaaaaaaaaatagaaaacatgaaaccaactaaacacagaaacttgacaCTGGACGAGAGGTGACACTGCCCTGAAATTTGTACTTGAGTACTGTTAAATTTGGGCTAACAGACTGATTACATGTTATATTGGTTTCGGGCTTGCTCAGTAGCTTTATTATTAATCATTTCCATACATGTATGAGAGcatgttattttttgttattctcGACTATGACATAGCTCTGTGCCAgctgctcctcctctcctctgcctgtTTCTGCTCCCACAGTATCTTCTCCTTCCCGCTGCCCTGGGCTGCCTCCTCCTTTACAACTCTGGCAATCTGCTTTGCTGACGGTCAGCGGTGAGTGGTGACACACAGTGAACTGCTTCTCAGAGTGAGCATGGCTCAGTGCTGGACCTGTCTCCATGACAGGCTTCATGAGGTTCTGCTCCTGTGCCTCTCCCTCTGTGCTtgcctttctctcttttttcctcctctctctattTGTGTTTTGCTCTTCtctcttgttttcttctttgcTCTTCACTTCCTCTTTGGTCTCCTGCACATGGGACTGGCCCATCCTCTCTGCCAGCTTTCTCAGATCCTGCTCCTCGTCCATAGAGCTCAGAGAGGGAAGCTTTGAGCTGTCCGGTCTCTTATTTTGTAGATctgctaCAGTCTGCTGCTGTGTCCAGGCAGGAGGTTCTGCTGTGGGCTGAGGCTGCTCAGGCTTAAGGCTCTGCTCTGCTTTGGATCCAGCACTCGGTGGGATATGCAGGGAAATTTCCTGTGGACCACTGAGCTCACAATCAACTCTGCTTCCATCAGTTTTActtatgctgctgctgctaatggTGTCTCCTAGGCTGGTGGTCACACCACTGTTCCTGTCATTACAACTACGGCCTCTGCCGTCGCCACCAAACACTTCATCAGCTTTGCTGCCATAATTTTTACAGCAGATAGTTTTAGCAGCAGCTTTGGTGACTTGAATACAATCTCTTTCGGGGAGCTCAGTAGCTTTACTGTCATCACTGTAATTATTAGTGCTGGATGAGTATGTACGAGTGTGAGCATCTTTACTGCTGCTCTTGCAACTGTTTGCTCGTTGAGGTTCATCTAGTTGCACAGGGCGGCCCCTGAAGACCAGGTCAGGGTAGGTCATCTGCATCTCCATAATAGACTGGTCTACGCTGATGAGATGGCAGTGTCGTGGCTTGGGCTGTGGTTTCACTGCAAATCTGGTGTCCGAATCCTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268327 True 1610 lncRNA 0.46 2 29994581 30000931

Neighbor

gene id symbol gene type direction distance location
cdt1 NA coding upstream 31491 29956720 ~ 29963090 (+)
pcca pcca coding upstream 296438 29659412 ~ 29698143 (+)
LOC120548236 LOC103357099,LOC103387711 coding upstream 339530 29646723 ~ 29655051 (+)
LOC120547721 LOC103357097 coding upstream 361820 29628731 ~ 29632761 (+)
LOC120547808 NA coding upstream 436246 29557263 ~ 29558335 (+)
nvl NA coding downstream 266857 30267788 ~ 30336160 (+)
sertad2b sertad2,LOC104932742 coding downstream 505123 30506054 ~ 30600609 (+)
slc1a4 slc1a4,LOC102791775 coding downstream 624699 30625630 ~ 30671184 (+)
LOC120548109 LOC102195401,LOC103353517,LOC102300597,LOC106939791 coding downstream 710642 30711573 ~ 31005023 (+)
ogfrl1 ogfrl1,LOC104917660,LOC103363704,LOC100701482 coding downstream 1182389 31183320 ~ 31198691 (+)
G197679 NA non-coding upstream 16642 29969790 ~ 29977939 (+)
G197654 NA non-coding upstream 215530 29768476 ~ 29779051 (+)
G197636 NA non-coding upstream 284576 29708743 ~ 29710005 (+)
G197635 NA non-coding upstream 289568 29704087 ~ 29705013 (+)
G197571 NA non-coding upstream 523625 29470012 ~ 29470956 (+)
G197695 NA non-coding downstream 63839 30064770 ~ 30066529 (+)
G197739 NA non-coding downstream 128954 30129885 ~ 30130223 (+)
LOC120547657 NA non-coding downstream 145892 30146823 ~ 30150716 (+)
G197761 NA non-coding downstream 168513 30169444 ~ 30169911 (+)
G197803 NA non-coding downstream 337845 30338776 ~ 30339212 (+)
LOC120547718 LOC102789565,LOC100690068,LOC101471749,LOC103357097 other upstream 375565 29518941 ~ 29619016 (+)
G197531 NA other upstream 644653 29348425 ~ 29349928 (+)
LOC120548242 ccdc85a,LOC104955469,LOC102783086,LOC102310250,LOC102209339,LOC100696856 other upstream 817087 29112688 ~ 29177494 (+)
ccnj ccnj,LOC102785723 other upstream 1692248 28294205 ~ 28302333 (+)
LOC120548047 adgra1,LOC103360772 other upstream 2213540 27554928 ~ 27781041 (+)
LOC120547658 NA other downstream 152580 30153511 ~ 30201820 (+)
G197999 NA other downstream 1233433 31234364 ~ 31234723 (+)
G198185 NA other downstream 2792357 32793288 ~ 32794661 (+)
G198245 rab1a,LOC104962072,LOC102231865 other downstream 2961457 32962388 ~ 32965074 (+)
slc2a15a LOC103367959,LOC104935160,LOC103476520,LOC106961144,LOC103155793 other downstream 3156798 33157729 ~ 33199862 (+)

Expression


Co-expression Network