G197695


Basic Information

Item Value
gene id G197695
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 30064770 ~ 30066529 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU268337
ACTTCAGCCCTGACGTAGGCGGTATAATTGCCTCGTGCTGTGGCACCGTTCTTCTACTAGCTACATCCACGGTGTGCACGGCACGCTGGTGGAGTAAAAGTTACAGCCAGAATGGCAGCAGACCGAGAATCAAAACTCCAGCTGGTTCACAGACACATCCGAGATTTTCCAGACTTTCCGAAGAAAGGCATCCTTTTTAGtggatcagcttgctttgtgcttttgtcgcctggctttgatgagggggcggagaattcccatcagctgtgtgcttggccatcaagtggtatttcagactggacgtgccgTGATGATTGCTCagttcacaacaacaaaacacacaaatcactttggtcttgtcaatgtaaccatttggcaactttttaaaagtaaactttccattcagaatcttattggcatccatttcggctcCTCGTGCTCGTCATCCACTCgcaacgtaacgttagcctactacttcTATTAATGCCGTTAATGTGTTTAactgacaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO:

id name namespace
GO:0009072 aromatic amino acid family metabolic process biological_process

KEGG:

id description
ko00630 Glyoxylate and dicarboxylate metabolism
ko04146 Peroxisome
ko03320 PPAR signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU268337 True 576 lncRNA 0.47 2 30064770 30066529

Neighbor

gene id symbol gene type direction distance location
cdt1 NA coding upstream 101680 29956720 ~ 29963090 (+)
pcca pcca coding upstream 366627 29659412 ~ 29698143 (+)
LOC120548236 LOC103357099,LOC103387711 coding upstream 409719 29646723 ~ 29655051 (+)
LOC120547721 LOC103357097 coding upstream 432009 29628731 ~ 29632761 (+)
LOC120547808 NA coding upstream 506435 29557263 ~ 29558335 (+)
nvl NA coding downstream 201259 30267788 ~ 30336160 (+)
sertad2b sertad2,LOC104932742 coding downstream 439525 30506054 ~ 30600609 (+)
slc1a4 slc1a4,LOC102791775 coding downstream 559101 30625630 ~ 30671184 (+)
LOC120548109 LOC102195401,LOC103353517,LOC102300597,LOC106939791 coding downstream 645044 30711573 ~ 31005023 (+)
ogfrl1 ogfrl1,LOC104917660,LOC103363704,LOC100701482 coding downstream 1116791 31183320 ~ 31198691 (+)
G197686 NA non-coding upstream 63839 29994581 ~ 30000931 (+)
G197679 NA non-coding upstream 86831 29969790 ~ 29977939 (+)
G197654 NA non-coding upstream 285719 29768476 ~ 29779051 (+)
G197636 NA non-coding upstream 354765 29708743 ~ 29710005 (+)
G197635 NA non-coding upstream 359757 29704087 ~ 29705013 (+)
G197739 NA non-coding downstream 63356 30129885 ~ 30130223 (+)
LOC120547657 NA non-coding downstream 80294 30146823 ~ 30150716 (+)
G197761 NA non-coding downstream 102915 30169444 ~ 30169911 (+)
G197803 NA non-coding downstream 272247 30338776 ~ 30339212 (+)
G197804 NA non-coding downstream 274808 30341337 ~ 30344038 (+)
LOC120547718 LOC102789565,LOC100690068,LOC101471749,LOC103357097 other upstream 445754 29518941 ~ 29619016 (+)
G197531 NA other upstream 714842 29348425 ~ 29349928 (+)
LOC120548242 ccdc85a,LOC104955469,LOC102783086,LOC102310250,LOC102209339,LOC100696856 other upstream 887276 29112688 ~ 29177494 (+)
ccnj ccnj,LOC102785723 other upstream 1762437 28294205 ~ 28302333 (+)
LOC120548047 adgra1,LOC103360772 other upstream 2283729 27554928 ~ 27781041 (+)
LOC120547658 NA other downstream 86982 30153511 ~ 30201820 (+)
G197999 NA other downstream 1167835 31234364 ~ 31234723 (+)
G198185 NA other downstream 2726759 32793288 ~ 32794661 (+)
G198245 rab1a,LOC104962072,LOC102231865 other downstream 2895859 32962388 ~ 32965074 (+)
slc2a15a LOC103367959,LOC104935160,LOC103476520,LOC106961144,LOC103155793 other downstream 3091200 33157729 ~ 33199862 (+)

Expression


Co-expression Network