G197860 (LOC101071133)


Basic Information

Item Value
gene id G197860
gene name LOC101071133
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 30439671 ~ 30440043 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU268537
GCATAGCAGGTCGAGCAGCTTCACTTTATAACTATGAAGCACCTAGGCCACTGAAGAAGGACCAACGCCCCTTCAACAAATCGAAGGAGAAGTCGACAGCATTCTTCCTCACTGCCAGTGGTGACCATGGCTCCAAAGGACAGTCTGCACAACCAAAGTCCCCATCCAAACCCAAACCATACTGTCCTCACTGCGACAATAAAGAACACTTCCTGAACGCTTGTACAGAGTTCAAGAAACTGGACACAAACCAAATTGTGAGGTGGATTACGGATGGACAGCGGTGTTGGAAGTGTGGACGATCTCACAAGCCTGAGGTTTGCACCCTCAAGCGACCATGCAATACCTGTAAAGAGCAACACCTAACAGTACT

Function

NR:

description
PREDICTED: uncharacterized protein LOC101071133

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268537 True 373 lncRNA 0.49 1 30439671 30440043

Neighbor

gene id symbol gene type direction distance location
nvl NA coding upstream 103511 30267788 ~ 30336160 (+)
cdt1 NA coding upstream 476581 29956720 ~ 29963090 (+)
pcca pcca coding upstream 741528 29659412 ~ 29698143 (+)
LOC120548236 LOC103357099,LOC103387711 coding upstream 784620 29646723 ~ 29655051 (+)
LOC120547721 LOC103357097 coding upstream 806910 29628731 ~ 29632761 (+)
sertad2b sertad2,LOC104932742 coding downstream 66011 30506054 ~ 30600609 (+)
slc1a4 slc1a4,LOC102791775 coding downstream 185587 30625630 ~ 30671184 (+)
LOC120548109 LOC102195401,LOC103353517,LOC102300597,LOC106939791 coding downstream 271530 30711573 ~ 31005023 (+)
ogfrl1 ogfrl1,LOC104917660,LOC103363704,LOC100701482 coding downstream 743277 31183320 ~ 31198691 (+)
LOC120547952 rims1,LOC102777706,LOC102298248 coding downstream 902916 31342959 ~ 31493220 (+)
G197859 NA non-coding upstream 183 30439283 ~ 30439488 (+)
G197858 NA non-coding upstream 535 30438847 ~ 30439136 (+)
G197856 NA non-coding upstream 1297 30437286 ~ 30438374 (+)
LOC120548213 NA non-coding upstream 2512 30430600 ~ 30437159 (+)
G197847 NA non-coding upstream 26527 30412917 ~ 30413144 (+)
G197852 neto1,LOC101071133 non-coding downstream 2603 30442646 ~ 30443121 (+)
G197862 NA non-coding downstream 12555 30452598 ~ 30452931 (+)
G197864 NA non-coding downstream 14418 30454461 ~ 30454668 (+)
G197865 NA non-coding downstream 14788 30454831 ~ 30455229 (+)
G197867 NA non-coding downstream 18629 30458672 ~ 30459448 (+)
LOC120547658 NA other upstream 237851 30153511 ~ 30201820 (+)
LOC120547718 LOC102789565,LOC100690068,LOC101471749,LOC103357097 other upstream 820655 29518941 ~ 29619016 (+)
G197531 NA other upstream 1089743 29348425 ~ 29349928 (+)
LOC120548242 ccdc85a,LOC104955469,LOC102783086,LOC102310250,LOC102209339,LOC100696856 other upstream 1262177 29112688 ~ 29177494 (+)
ccnj ccnj,LOC102785723 other upstream 2137338 28294205 ~ 28302333 (+)
G197999 NA other downstream 794321 31234364 ~ 31234723 (+)
G198185 NA other downstream 2353245 32793288 ~ 32794661 (+)
G198245 rab1a,LOC104962072,LOC102231865 other downstream 2522345 32962388 ~ 32965074 (+)
slc2a15a LOC103367959,LOC104935160,LOC103476520,LOC106961144,LOC103155793 other downstream 2717686 33157729 ~ 33199862 (+)
si:ch211-51a6.2 LOC104924867,LOC103357113,LOC100694100 other downstream 3541468 33981511 ~ 34008003 (+)

Expression


Co-expression Network