G197958


Basic Information

Item Value
gene id G197958
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 30950360 ~ 30954271 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU268641
ctctctctctttttctctctctctgtttctcttttctttctctctctctccctgtttctctctcttttctctctctctgtcctctctccatccctccatctctctctgtctctctctctctttttctctctctctccttctctctcatcccgccttctccctccctctctccctgtctctttctctttttctctctctctccttctttctccatcccgccttctccctccctctctatctctctgtttctcttttctttctctctctctccccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268641 True 274 lncRNA 0.48 2 30950360 30954271

Neighbor

gene id symbol gene type direction distance location
slc1a4 slc1a4,LOC102791775 coding upstream 279176 30625630 ~ 30671184 (+)
sertad2b sertad2,LOC104932742 coding upstream 349751 30506054 ~ 30600609 (+)
nvl NA coding upstream 614200 30267788 ~ 30336160 (+)
cdt1 NA coding upstream 987270 29956720 ~ 29963090 (+)
pcca pcca coding upstream 1252217 29659412 ~ 29698143 (+)
ogfrl1 ogfrl1,LOC104917660,LOC103363704,LOC100701482 coding downstream 229049 31183320 ~ 31198691 (+)
LOC120547952 rims1,LOC102777706,LOC102298248 coding downstream 388688 31342959 ~ 31493220 (+)
bcl11aa bcl11a,LOC103363701,LOC102779517 coding downstream 558593 31512864 ~ 31573621 (+)
fancl fancl coding downstream 1490816 32445087 ~ 32483666 (+)
LOC120547814 NA coding downstream 1702715 32656986 ~ 32659866 (+)
G197854 NA non-coding upstream 275878 30674212 ~ 30674482 (+)
G197909 NA non-coding upstream 303040 30646403 ~ 30647320 (+)
G197889 NA non-coding upstream 461802 30488250 ~ 30488558 (+)
G197887 NA non-coding upstream 462947 30487115 ~ 30487413 (+)
G197885 NA non-coding upstream 466931 30483208 ~ 30483429 (+)
G197982 NA non-coding downstream 244684 31198955 ~ 31200000 (+)
G197983 NA non-coding downstream 246585 31200856 ~ 31202473 (+)
G197991 NA non-coding downstream 251820 31206091 ~ 31206356 (+)
G198002 NA non-coding downstream 286674 31240945 ~ 31242282 (+)
G198004 NA non-coding downstream 297118 31251389 ~ 31251871 (+)
LOC120547658 NA other upstream 748540 30153511 ~ 30201820 (+)
LOC120547718 LOC102789565,LOC100690068,LOC101471749,LOC103357097 other upstream 1331344 29518941 ~ 29619016 (+)
G197531 NA other upstream 1600432 29348425 ~ 29349928 (+)
LOC120548242 ccdc85a,LOC104955469,LOC102783086,LOC102310250,LOC102209339,LOC100696856 other upstream 1772866 29112688 ~ 29177494 (+)
ccnj ccnj,LOC102785723 other upstream 2648027 28294205 ~ 28302333 (+)
G197999 NA other downstream 280093 31234364 ~ 31234723 (+)
G198185 NA other downstream 1839017 32793288 ~ 32794661 (+)
G198245 rab1a,LOC104962072,LOC102231865 other downstream 2008117 32962388 ~ 32965074 (+)
slc2a15a LOC103367959,LOC104935160,LOC103476520,LOC106961144,LOC103155793 other downstream 2203458 33157729 ~ 33199862 (+)
si:ch211-51a6.2 LOC104924867,LOC103357113,LOC100694100 other downstream 3027240 33981511 ~ 34008003 (+)

Expression


Co-expression Network