G198090


Basic Information

Item Value
gene id G198090
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 31852290 ~ 31852614 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU268793
aagctcagcgcaaattctttcaggaagacgtcattaacccaatcactactcattcttaaatcaaatcagctgttcaagaagtgacgctgtcagttaaaccaatcagacttggccacgagattcaagggccaatcacagccttacaactctgctttaaatctgttctctccttgtgctgtcagccgtcgtttcaggcaaagcactcgaccctcctcctcccctgccgcctccggtcgttgtgtttctcccggctgaccgctccgttgcctcttcggtccagtctctggtctcttcgccgccgccaccagtgtctgggctccatcgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268793 True 325 lncRNA 0.53 1 31852290 31852614

Neighbor

gene id symbol gene type direction distance location
bcl11aa bcl11a,LOC103363701,LOC102779517 coding upstream 278669 31512864 ~ 31573621 (+)
LOC120547952 rims1,LOC102777706,LOC102298248 coding upstream 359070 31342959 ~ 31493220 (+)
ogfrl1 ogfrl1,LOC104917660,LOC103363704,LOC100701482 coding upstream 653599 31183320 ~ 31198691 (+)
LOC120548109 LOC102195401,LOC103353517,LOC102300597,LOC106939791 coding upstream 847267 30711573 ~ 31005023 (+)
slc1a4 slc1a4,LOC102791775 coding upstream 1181106 30625630 ~ 30671184 (+)
fancl fancl coding downstream 592473 32445087 ~ 32483666 (+)
LOC120547814 NA coding downstream 804372 32656986 ~ 32659866 (+)
LOC120547622 NA coding downstream 809473 32662087 ~ 32666672 (+)
LOC120547668 LOC106676435,LOC106674820 coding downstream 926902 32779516 ~ 32783434 (+)
fgf8a fgf8,LOC104933818,LOC106515330,LOC108239148 coding downstream 1398174 33250788 ~ 33258175 (+)
G198089 NA non-coding upstream 103382 31748673 ~ 31748908 (+)
G198082 NA non-coding upstream 227065 31625008 ~ 31625225 (+)
LOC120547953 NA non-coding upstream 440255 31409523 ~ 31412035 (+)
G198004 NA non-coding upstream 600419 31251389 ~ 31251871 (+)
G198002 NA non-coding upstream 610008 31240945 ~ 31242282 (+)
G198091 NA non-coding downstream 76155 31928769 ~ 31928980 (+)
G198095 NA non-coding downstream 96007 31948621 ~ 31948925 (+)
G198100 NA non-coding downstream 589918 32442532 ~ 32442739 (+)
G198102 NA non-coding downstream 593281 32445895 ~ 32446422 (+)
G198126 NA non-coding downstream 729106 32581720 ~ 32583279 (+)
G197999 NA other upstream 617567 31234364 ~ 31234723 (+)
LOC120547658 NA other upstream 1650470 30153511 ~ 30201820 (+)
LOC120547718 LOC102789565,LOC100690068,LOC101471749,LOC103357097 other upstream 2233274 29518941 ~ 29619016 (+)
G197531 NA other upstream 2502362 29348425 ~ 29349928 (+)
LOC120548242 ccdc85a,LOC104955469,LOC102783086,LOC102310250,LOC102209339,LOC100696856 other upstream 2674796 29112688 ~ 29177494 (+)
G198185 NA other downstream 940674 32793288 ~ 32794661 (+)
G198245 rab1a,LOC104962072,LOC102231865 other downstream 1109774 32962388 ~ 32965074 (+)
slc2a15a LOC103367959,LOC104935160,LOC103476520,LOC106961144,LOC103155793 other downstream 1305115 33157729 ~ 33199862 (+)
si:ch211-51a6.2 LOC104924867,LOC103357113,LOC100694100 other downstream 2128897 33981511 ~ 34008003 (+)
LOC120548523 NA other downstream 3042569 34895183 ~ 34948460 (+)

Expression


Co-expression Network