G198292


Basic Information

Item Value
gene id G198292
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 33356856 ~ 33357267 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU269022
gcgtaaacatacacgccactttctaaagccaagtggtgtgttatctgtatcattttgagcgccgtatacagcggacgggtcggctttagtaaaagaagaaagcgacaattgagtttaggaaacatgacacgcgggaacgaaggaaacgtgacacgccgGACGCGATCCTcagtctcctggatgaaagtcctgtgttgttggacccatcctccccccccgaccaacctccctacgcagattttcgccctttcatattACTCGCTACGGCATCAAttgacacgcaatcgcaaggtaatgtaagtcaatggaggccaaacggcgttgatgaacacgctaaaaagcgagtatgcgtcttgataacacgccaataatggcatacgaattggcgtgtcatacatacaccacttcATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU269022 True 412 lncRNA 0.49 1 33356856 33357267

Neighbor

gene id symbol gene type direction distance location
fbxw4 NA coding upstream 1485 33278972 ~ 33355371 (+)
fgf8a fgf8,LOC104933818,LOC106515330,LOC108239148 coding upstream 98681 33250788 ~ 33258175 (+)
LOC120547668 LOC106676435,LOC106674820 coding upstream 573422 32779516 ~ 32783434 (+)
LOC120547622 NA coding upstream 690184 32662087 ~ 32666672 (+)
LOC120547814 NA coding upstream 696990 32656986 ~ 32659866 (+)
wbp1la NA coding downstream 24395 33381662 ~ 33392267 (+)
LOC120547582 NA coding downstream 38165 33395432 ~ 33412701 (+)
nt5c2a LOC101476423,LOC102302397 coding downstream 68084 33425351 ~ 33464609 (+)
LOC120547725 LOC104935158,LOC103367215 coding downstream 123134 33480401 ~ 33507482 (+)
trnaw-cca_27 NA coding downstream 345019 33702286 ~ 33702357 (+)
G198291 NA non-coding upstream 132 33356354 ~ 33356724 (+)
G198287 NA non-coding upstream 80322 33275982 ~ 33276534 (+)
G198269 NA non-coding upstream 274046 33082607 ~ 33082810 (+)
G198257 NA non-coding upstream 335420 33021035 ~ 33021436 (+)
G198221 NA non-coding upstream 432954 32923682 ~ 32923902 (+)
LOC120548204 NA non-coding downstream 61430 33418697 ~ 33419560 (+)
G198324 NA non-coding downstream 112291 33469558 ~ 33469783 (+)
G198351 NA non-coding downstream 235326 33592593 ~ 33598024 (+)
G198352 NA non-coding downstream 252925 33610192 ~ 33610590 (+)
G198369 NA non-coding downstream 359430 33716697 ~ 33716951 (+)
slc2a15a LOC103367959,LOC104935160,LOC103476520,LOC106961144,LOC103155793 other upstream 156994 33157729 ~ 33199862 (+)
G198245 rab1a,LOC104962072,LOC102231865 other upstream 391782 32962388 ~ 32965074 (+)
G198185 NA other upstream 562195 32793288 ~ 32794661 (+)
G197999 NA other upstream 2122133 31234364 ~ 31234723 (+)
LOC120547658 NA other upstream 3155036 30153511 ~ 30201820 (+)
si:ch211-51a6.2 LOC104924867,LOC103357113,LOC100694100 other downstream 624244 33981511 ~ 34008003 (+)
LOC120548523 NA other downstream 1537916 34895183 ~ 34948460 (+)

Expression


Co-expression Network