G198505


Basic Information

Item Value
gene id G198505
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 33895870 ~ 33899177 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU269264
GCTCTCTTTTCAACAAAGTCCAGAAAATGTCACACATGCCCTCCCTGAAAAATATACAGATTTGTTCACAAATGTTAAGTAATATCTAGTTATGTATACAGAATATATGTCAATACAGataatacataaaacattacagccaaacTGTTGCCTCATGTTCATTGCCAGATTATTGACTTTATGTTGTatagaagacacacacacacatgctcacctTTTCCTATGGTTACCCAACTATAAATGCACACTGAATTGCTTAGAGCACTGTTATACACTTTGTATTAGAATCAtagtatactgtacatacacatgaATAATGGTTGCTGTTCAAATGCGTCGTGCATGTGGCTTCTTCACATTGTGCTTCTAGGATTCCTTTTTTGTATGTTATGTTTGCTGTATAACATAAAACAGGAAGCTATCTTTAGAGAAGGGTTAGCCGTGGATATTGCTGTTACGCTGCAGCCACATGTGCAGACAATTTGTTAAATGGTCAATTTGGGTCTGtaacaaaaaataatgaaagCAAGGTGAGTTAAAAGTTTGTAAAAACATGTATGCTTTTGATCATCCACCTACATCATTTGATAGTGTACCCTTTAACCGGTGGTGGAAGCACAGTTGCAGTGAAGATGTCTAGGCACCTGTGAGTTGTCATGTCATGATGTAGTTATCATGGAGAGCCCCCACCCACACAGCCTACTAAACTGTATTCCCTGAAAAACTGTATTCCCTTGAGTGCAGCTCCTCTATTATTCCGTTGTTGTGTATGTAGTCTGCACTGCTGAGGCTTTGGGAGCACATGTGCTGCGATTAAAAATGGAAGTTAACTTAAAATAAGGCTGAGAAGCAGCGTGTGATTGTCCTTTGTGGTTAAAAGCTTCAGGTATGTTGGACCTCTGAACCCAGCTGTTTGCCAGGGTGTATTAACCTTAGTACACTtctacatcactgcagcaaggTTAGAAGTGAAACCCGTACTCTTTGATAAGATGTGCTAAAGTAACTATACAATAACAAACCATCAtcacactgagacaaaaaaaacaaaaaaaacaatcagactTCAGAATCTAACTGCTGCAACAGTGACATTGTAGCTTGTTGGTCTTTGCAAAAGTAATTTCACCTGGTGCTTTGCAAATTGGTTCTTTCCAATAAATCAGCTCCTACAGACTCCACTCTTCCCAATAATCCTGTATAtacgggagcgtgcctatgttcccacagccctatgagcccacatttctaagaatttttttttcactgaaaattaggccctatgttcccacatttctaaaaattattttttcactgaaaattaggccctatgttcccacatttctaagaattttttttcaaaattaggccctatgttctcaaagttcccacatttctaagattttttccaaaattaggccctacagttcccacatttctaagatttttttccaaaattaggccctatgttcccacatttcctttttcataaaattGTATCAGATTTGATCCCCCTTTCTCcaaatttggtagccaattacaccaaacctattatccagtagcaatggactacagatggaatgtaaccctaatcCCAAcgtaatcttagaaatgtgggaatatagggcctaattttcagtgaaaagaaaattcttagaaatgtgggaacataggactgtgggaccattgggctgtgggaacgtAGGGCTGACCCCGTATATACAGCCCAGCAGCCAGGTTTTTCTAGTATATTGTGAACAGGACTTGAGGCTGGATAGAGCATGATTCCTTCGCATGGGATTATGCAGTAGGCATCAGAAGGGACAGAACGCTATGTTGATTTTCTTGTAACCATGACCAAGTAGTTGTTTCCTTAACCACATGATAATGCTTCTCTAAGCTTAacaaagttgttgttgttttttaactcAAATGATGATCTTTCACCACTAACTAAGTCTGTGTTTTGCCTAAAGGCCATGCAGATTCATTGTTAGTTAATGTGGCTCCATTTGTAGTTTTGTTCGACTTTGCTATTCAGGATGACAGCGGTGAGTTACAGAGTGGAAAGTGCTGAGTTGGTTATGTAGTGAAgatgatggtgatggaggaagtCTTTGGTCATCTCGACCAGGTTTCAGCAGCAGATGCGATCCTTTGTTGCTGCACTGTTCTGGTTTAGCTGGTGTCACCGAGAGTGGCCAGTATGGAGCTGGCCTGCGAGGCAAGTTTACTGCTGCTGTGATCTGTCAGTTTACTGAGGCTTTCCTTCATATTCACAGAGTTTAACTCCACCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU269264 True 2298 lncRNA 0.40 2 33895870 33899177

Neighbor

gene id symbol gene type direction distance location
ctu2 ctu2 coding upstream 158878 33719799 ~ 33736992 (+)
trnaw-cca_27 NA coding upstream 193513 33702286 ~ 33702357 (+)
LOC120547725 LOC104935158,LOC103367215 coding upstream 388388 33480401 ~ 33507482 (+)
nt5c2a LOC101476423,LOC102302397 coding upstream 431261 33425351 ~ 33464609 (+)
LOC120547582 NA coding upstream 483169 33395432 ~ 33412701 (+)
chchd1 chchd1 coding downstream 71361 33970538 ~ 33976543 (+)
zswim8 zswim8 coding downstream 119200 34018377 ~ 34082623 (+)
ndst2a ndst2 coding downstream 192960 34092137 ~ 34124873 (+)
si:dkey-191g9.7 NA coding downstream 230826 34130003 ~ 34138259 (+)
polr1c polr1c coding downstream 243359 34142536 ~ 34158774 (+)
G198488 NA non-coding upstream 43959 33851677 ~ 33851911 (+)
G198369 NA non-coding upstream 178919 33716697 ~ 33716951 (+)
G198352 NA non-coding upstream 285280 33610192 ~ 33610590 (+)
G198351 NA non-coding upstream 297846 33592593 ~ 33598024 (+)
G198324 NA non-coding upstream 426087 33469558 ~ 33469783 (+)
LOC120547847 NA non-coding downstream 21502 33920679 ~ 33921645 (+)
G198520 NA non-coding downstream 78753 33977930 ~ 33978182 (+)
G198533 NA non-coding downstream 112307 34011484 ~ 34012017 (+)
G198534 NA non-coding downstream 113670 34012847 ~ 34013380 (+)
G198536 NA non-coding downstream 116926 34016103 ~ 34016368 (+)
slc2a15a LOC103367959,LOC104935160,LOC103476520,LOC106961144,LOC103155793 other upstream 696008 33157729 ~ 33199862 (+)
G198245 rab1a,LOC104962072,LOC102231865 other upstream 930796 32962388 ~ 32965074 (+)
G198185 NA other upstream 1101209 32793288 ~ 32794661 (+)
G197999 NA other upstream 2661147 31234364 ~ 31234723 (+)
LOC120547658 NA other upstream 3694050 30153511 ~ 30201820 (+)
si:ch211-51a6.2 LOC104924867,LOC103357113,LOC100694100 other downstream 82334 33981511 ~ 34008003 (+)
LOC120548523 NA other downstream 996006 34895183 ~ 34948460 (+)

Expression


Co-expression Network