si:ch73-52p7.1 (LOC104931135)


Basic Information

Item Value
gene id si:ch73-52p7.1
gene name LOC104931135
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 12078656 ~ 12083832 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782954.1
AGCTGGATGTGTGATTTTTCCTTCCCATCCCAGCCTCAAACTGACGCATTTACGTATCAGCTCTTCAGAAGCAACTTGAGgctcatgtactgtatgtgtacctAAACACCCACACGTCCACACATGAACACCAATCAATATGCTGCCTGAGACTCTCCCCCAGCAGTGATGCCTGCCTTCAGCCCTCCCACCCCTCTCgtctgtgtgctgctgtgtgtgtcggTGGCACTGCAGCGCTCTGACCTGCGTCTGGCTTATGTGACCCACAACAGCTTTTTCTACTACTCCTGCAGCCAGGACCCGCAACCATGCAGCGTCTCATCACTTACAGACTGCAGATGCAAGGACATCCAGCTTTCCATGCTGCACCGCCCCCAGTCGCACTCGTCTCCCGTTTTCCGCATGAGGCGTTTAACTGTTTGGTTCACGTCGCCGTTAAACACGGCACGTCTCCTCAACAACTCGGAGGTGAGGCACCTCACCCTGATCCACTGTGGCCCTGGAGGATCTAGAAAAACATCATCTTCTTCCCTGGAGGGACATTTTGCTGTGCAGCACCTGGAGAGGCTGACGGTGGTGAACTTGGCGCAGAAGCCGGTTCACAACTGTCCAGATGCAAACAGAGCCAAGAACACAGACTCAAACAGTGACCCAGACAGGGATAATGGTGCTCACCTTGGCACAAATACCTTCAACAGGAATGTATTGAAGAGAGATTCCTTGGCTTTGTCTTCACCCCAGATCCAAGACATCTTCCTGGGCAGGGAGCTGGGAGCAGCGTTTCACGAACAGGCCAGACTGGGAATCatccacagctctgtgctggAGTGGGGAGCAGTAGTCAAAGCCTACACAGTTCAAACACACATAGACGATGAAGGCATGTTGCCTTTCCCTGACCTCCACCTGCCAAAATTACCAGAGACATCTGTCATATATGTCAGCTTTGTGTACTGATACCAGGTTACTTTTTGAGGCGTGCAGGAGAGAACAACGGGAAGAAGATGATCCAGTGTTGAGGTCCTGCAAACAATCACTTTCTTGCTCACCAGAGATAAATACGTTTAGGAATCTGGAGTCTTTCTAGTTGCCTATGGCTCTGATTTACCTGGATAACTGGATAACTccaaagaaaacacacatttttgcacaaacgcaaaactaaattatatttttcttgTCTAATAGCTGCTCAGCTGTTTATCAGCATATTAGAAGAAAATAGATCAACTAATGAGAGACCCTCTGAGGGACCAGAATAGCCTGCCAACCCCTTCCAGCTAACGTGTCCTTTGTTTCTAAATGTTGTTTATCCTTATTCGCAAAATGAAATGACAGTGGTGGTTGGATGGCTTTAGTTGAGCATTTATACTAACTTAGTTTTTCCTCTCTACTACAAGGACAGAAAATGTGAGCTTACAACCATATAGTGCATTCCACAGAAGCTCTGATCCAGTTGCTGAATTCACACTGAATATAAAGCTGCTGACTATCAgatgttgtgaaaaacaaaagggTTTTCTTGTAGGCCAAAATGTCATCACTAGAGGGAGGACATTGAGATAATTTGGATTTCAGCGCAGCTCTACTTTAGCATTTCTACAGATgaccctgacctctgacctctggtcccTGTGTGAAAGCAAGCAGAGACTTTCTCCTCTGGGATCAATGAATCATCGTTAAATGTGAAATTCATGTTTGCTTCCGGAATTAAACCACAAGATGGCAGCAGATACGCTTGAGTCAAGGAGGAAGAAGCCTACTGAAGTGTTGTGGAAGGACTGAGCGTACTGACAGTTTTTAAAGTCTACAACACTTAAAAGCACTTTAAAACCTTGTGAGGAATGTTATTTGTTGAGGTAGGCTAAATTGTGAAGAGTTAAACTAGCATGGCatgatatttatttgtttacaaaATATCAATTTACCAATGTCAacaaacaacagaaataaattatttactCATCA

Function

NR:

description
uncharacterized protein LOC103035101 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782954.1 True 1971 mRNA 0.45 2 12078656 12083832

Neighbor

gene id symbol gene type direction distance location
olig3 olig3 coding downstream 18592 12058425 ~ 12060064 (-)
atl2 LOC103370707 coding downstream 70978 11989367 ~ 12007678 (-)
akt3a akt3,LOC108244154,LOC107099926,LOC104931217,LOC100691860,LOC105927955 coding downstream 244586 11769396 ~ 11834070 (-)
arid5b arid5b coding downstream 420553 11584571 ~ 11658103 (-)
cep170aa cep170 coding downstream 506038 11530590 ~ 11572618 (-)
map3k21 LOC103372805,LOC104946551,LOC102290220,LOC102205779 coding upstream 33903 12117735 ~ 12141600 (-)
rgs17 LOC103372808,LOC101482424 coding upstream 98458 12182290 ~ 12203328 (-)
ccser2a LOC104963914 coding upstream 773897 12857729 ~ 12906350 (-)
fam149b1 fam149b1 coding upstream 866078 12949910 ~ 12962921 (-)
si:ch211-248a14.8 LOC104964725 coding upstream 887716 12971548 ~ 12977410 (-)
G193248 NA non-coding downstream 61250 12017159 ~ 12017406 (-)
G193247 NA non-coding downstream 61523 12016589 ~ 12017133 (-)
G193205 NA non-coding downstream 210858 11793674 ~ 11867798 (-)
G193201 NA non-coding downstream 270100 11763663 ~ 11808556 (-)
G193191 NA non-coding downstream 362797 11715173 ~ 11715859 (-)
G193305 NA non-coding upstream 93777 12177609 ~ 12178477 (-)
G193306 NA non-coding upstream 96117 12179949 ~ 12180953 (-)
G193307 NA non-coding upstream 143276 12227108 ~ 12227308 (-)
G193342 NA non-coding upstream 252267 12336099 ~ 12336336 (-)
G193349 NA non-coding upstream 276898 12360730 ~ 12361597 (-)
adss2 adss,LOC107098117,LOC107375820 other downstream 159842 11888092 ~ 11918814 (-)
lyrm7 lyrm7 other downstream 551372 11524906 ~ 11527284 (-)
camkmt camkmt other downstream 720984 11236314 ~ 11357672 (-)
LOC120548461 NA other downstream 1115766 10956572 ~ 10962890 (-)
LOC120548128 LOC103374855 other downstream 1124633 10890469 ~ 10954023 (-)
phactr2 phactr2 other upstream 213657 12297489 ~ 12348599 (-)
G193427 dnajc9 other upstream 863863 12947695 ~ 12948609 (-)
mzt1 mzt1 other upstream 1621893 13705725 ~ 13707932 (-)
dhx32b LOC102782489,LOC102202651,LOC100703771,LOC101477466,LOC102310286 other upstream 2140836 14224668 ~ 14233001 (-)
LOC120548283 NA other upstream 2362401 14446233 ~ 14447528 (-)

Expression


Co-expression Network