LOC120547537


Basic Information

Item Value
gene id LOC120547537
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 26865625 ~ 26873668 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782997.1
CGTGAAGCGGTATGttaatatactgtctatggttaaagTTAGCGTGACATTTTCCTATGTCATATTTGTTTTCCTTGTACACCGAGTCGCGTTCACAAGTCACGAAGGATGTTTATTCAAATTCCAGAAACAGAGGAGTAAAATGCCAATGCAAAAAGACACTTGAACCCGGGACCCACCCTGAACAATGGTCTATATGtacactagctagctaaacaTCTCAGCACCACCTCTACAATGTCTTCcccagagagggaggaaaatgTTCCTGACCTGCAGCTAAGTTTTGTCTTTGGGAACAGTGTTGTCAATTCTCAATTCATTCTGCCCGAGGATGCAGAGGCACAGGAGCAACCTGAATATGACTTAACAGAGACATTATGTCTGAGCAGAACTCAGCTGAAACACGTTGCAGACAGTATTTTGAAAAATAGCACACTAAAGTATTTATATCTCGAAGGCAACCACATATCCAGTATCCCAGATTCAATGTTCATCAGCTTGCCCAACCTCCTGTGGCTGGACCTCAGAAATAACCAAATTGCATCGCTCCCTGCTGAAGTTGGCTTGCACAGATCTCTGAAAACAATACTTCTGGAAGGAAACCCCATCTCAGAACTTCCACCAGAGTTGGGAAATGTGATTACCCTCAAAGGCTTGAACCTAAGGAATTGCCCCATCAGTTTCCCTCCACAAGACATTGTGAACCAGGGACTCCAGAGGATCCTCCAGTACCTCAGGAGTGCGATGGCTAGTCGGCCCGTTAGCATGAGAAGGAGCCCCTCAGAGTTGCCAGTGGTGGAGAAGCTCCAGCTGTCAGAGCTGATGGGGTCCAGTACGGAGGAGCAGGATGATTCAGGTGACGAGCTGCAGAAGTTCATGGAGCTCAAACACAAGATGTTCCTGCTGGACAAAGCTGAGCTGGGCTCAACAGCACAGGGTGATATAACCCCAAAGTCACACCGCCTTTCTGTTATCCAAAAAAAAAAGGCAACTACCAAGGCTGGCATAATTCCCGAGCCCCCCCTGTTTGACACTCGGCATTGGAAGAGGCCAGAAGACAGGAAACAGGCTGCAATGAAAGAGCTGAAGGAGAAACAGGCTATTCTCGAGCAGAGAAAAAAAAGCCAAGACACTCTTCGGAAGTGGCGTACACAAGCCATGACCACACGGGGGAAGAACATGTCTCAACACCAGCAGAGGAAGCATGCACAACAAAGAAACCAAGAGGAAGCGGACACAAATTCAAAAGCTGGTGTGGAGGACAGCGGTGATACTCGCCAGGGTCAGACGTCCTGCGTGTCTATCAAAGATTGTGAGGAGACCAGGTCAGCCCGTGAGCTGGAGCGCCAGATACGCTCACGTGTCGAGAAGATGCAAGAGAGACGCAGGAATCCCAGGGGCACGAGCACAGAGCAGATGGCAGCGTCAGAGCAAGATGTGGAGGAGATGAGGAAGCTACAGGCTCGCCTTCTAGAGAGGAAGCGTAATCGAGGAAGAGATCGTGAAAATAGTTTCAATATCTTCACAGCAGACACCTGGCCGAGTTTCATTGACAAGtaacagaaattacaatgtcTGTTTGAGTTCTGCTGTATTAAATTCATACTCAAAATTCTTGTAAAGGCCTTTATGAATGACCATTGTAATGCTCatatcataaaataaaaaccacagtGCTGTTACTGGGCAAGGGAGT
>XM_039782998.1
GTGAGACTAGTGTGACAGTTGCTGGCCAGTGACTGTAGTCGACGTATCCCTGTATCACCGACTGTCATGCATGTCAACACATAAGAACCAGCCTCTGTAGAAACAGAGGAGTAAAATGCCAATGCAAAAAGACACTTGAACCCGGGACCCACCCTGAACAATGGTCTATATGtacactagctagctaaacaTCTCAGCACCACCTCTACAATGTCTTCcccagagagggaggaaaatgTTCCTGACCTGCAGCTAAGTTTTGTCTTTGGGAACAGTGTTGTCAATTCTCAATTCATTCTGCCCGAGGATGCAGAGGCACAGGAGCAACCTGAATATGACTTAACAGAGACATTATGTCTGAGCAGAACTCAGCTGAAACACGTTGCAGACAGTATTTTGAAAAATAGCACACTAAAGTATTTATATCTCGAAGGCAACCACATATCCAGTATCCCAGATTCAATGTTCATCAGCTTGCCCAACCTCCTGTGGCTGGACCTCAGAAATAACCAAATTGCATCGCTCCCTGCTGAAGTTGGCTTGCACAGATCTCTGAAAACAATACTTCTGGAAGGAAACCCCATCTCAGAACTTCCACCAGAGTTGGGAAATGTGATTACCCTCAAAGGCTTGAACCTAAGGAATTGCCCCATCAGTTTCCCTCCACAAGACATTGTGAACCAGGGACTCCAGAGGATCCTCCAGTACCTCAGGAGTGCGATGGCTAGTCGGCCCGTTAGCATGAGAAGGAGCCCCTCAGAGTTGCCAGTGGTGGAGAAGCTCCAGCTGTCAGAGCTGATGGGGTCCAGTACGGAGGAGCAGGATGATTCAGGTGACGAGCTGCAGAAGTTCATGGAGCTCAAACACAAGATGTTCCTGCTGGACAAAGCTGAGCTGGGCTCAACAGCACAGGGTGATATAACCCCAAAGTCACACCGCCTTTCTGTTATCCAAAAAAAAAAGGCAACTACCAAGGCTGGCATAATTCCCGAGCCCCCCCTGTTTGACACTCGGCATTGGAAGAGGCCAGAAGACAGGAAACAGGCTGCAATGAAAGAGCTGAAGGAGAAACAGGCTATTCTCGAGCAGAGAAAAAAAAGCCAAGACACTCTTCGGAAGTGGCGTACACAAGCCATGACCACACGGGGGAAGAACATGTCTCAACACCAGCAGAGGAAGCATGCACAACAAAGAAACCAAGAGGAAGCGGACACAAATTCAAAAGCTGGTGTGGAGGACAGCGGTGATACTCGCCAGGGTCAGACGTCCTGCGTGTCTATCAAAGATTGTGAGGAGACCAGGTCAGCCCGTGAGCTGGAGCGCCAGATACGCTCACGTGTCGAGAAGATGCAAGAGAGACGCAGGAATCCCAGGGGCACGAGCACAGAGCAGATGGCAGCGTCAGAGCAAGATGTGGAGGAGATGAGGAAGCTACAGGCTCGCCTTCTAGAGAGGAAGCGTAATCGAGGAAGAGATCGTGAAAATAGTTTCAATATCTTCACAGCAGACACCTGGCCGAGTTTCATTGACAAGtaacagaaattacaatgtcTGTTTGAGTTCTGCTGTATTAAATTCATACTCAAAATTCTTGTAAAGGCCTTTATGAATGACCATTGTAATGCTCatatcataaaataaaaaccacagtGCTGTTACTGGGCAAGGGAGT
>XM_039782999.1
GATACGCTGCGGAGGCAGCTTTTCGCCTTGTTTGCACGTGGACGGGTTGCCGTAGTTTGTGTTGACCTCGTTGCCATGGTTACGACGTCGAATCCGTGAAGCGAAACAGAGGAGTAAAATGCCAATGCAAAAAGACACTTGAACCCGGGACCCACCCTGAACAATGGTCTATATGtacactagctagctaaacaTCTCAGCACCACCTCTACAATGTCTTCcccagagagggaggaaaatgTTCCTGACCTGCAGCTAAGTTTTGTCTTTGGGAACAGTGTTGTCAATTCTCAATTCATTCTGCCCGAGGATGCAGAGGCACAGGAGCAACCTGAATATGACTTAACAGAGACATTATGTCTGAGCAGAACTCAGCTGAAACACGTTGCAGACAGTATTTTGAAAAATAGCACACTAAAGTATTTATATCTCGAAGGCAACCACATATCCAGTATCCCAGATTCAATGTTCATCAGCTTGCCCAACCTCCTGTGGCTGGACCTCAGAAATAACCAAATTGCATCGCTCCCTGCTGAAGTTGGCTTGCACAGATCTCTGAAAACAATACTTCTGGAAGGAAACCCCATCTCAGAACTTCCACCAGAGTTGGGAAATGTGATTACCCTCAAAGGCTTGAACCTAAGGAATTGCCCCATCAGTTTCCCTCCACAAGACATTGTGAACCAGGGACTCCAGAGGATCCTCCAGTACCTCAGGAGTGCGATGGCTAGTCGGCCCGTTAGCATGAGAAGGAGCCCCTCAGAGTTGCCAGTGGTGGAGAAGCTCCAGCTGTCAGAGCTGATGGGGTCCAGTACGGAGGAGCAGGATGATTCAGGTGACGAGCTGCAGAAGTTCATGGAGCTCAAACACAAGATGTTCCTGCTGGACAAAGCTGAGCTGGGCTCAACAGCACAGGGTGATATAACCCCAAAGTCACACCGCCTTTCTGTTATCCAAAAAAAAAAGGCAACTACCAAGGCTGGCATAATTCCCGAGCCCCCCCTGTTTGACACTCGGCATTGGAAGAGGCCAGAAGACAGGAAACAGGCTGCAATGAAAGAGCTGAAGGAGAAACAGGCTATTCTCGAGCAGAGAAAAAAAAGCCAAGACACTCTTCGGAAGTGGCGTACACAAGCCATGACCACACGGGGGAAGAACATGTCTCAACACCAGCAGAGGAAGCATGCACAACAAAGAAACCAAGAGGAAGCGGACACAAATTCAAAAGCTGGTGTGGAGGACAGCGGTGATACTCGCCAGGGTCAGACGTCCTGCGTGTCTATCAAAGATTGTGAGGAGACCAGGTCAGCCCGTGAGCTGGAGCGCCAGATACGCTCACGTGTCGAGAAGATGCAAGAGAGACGCAGGAATCCCAGGGGCACGAGCACAGAGCAGATGGCAGCGTCAGAGCAAGATGTGGAGGAGATGAGGAAGCTACAGGCTCGCCTTCTAGAGAGGAAGCGTAATCGAGGAAGAGATCGTGAAAATAGTTTCAATATCTTCACAGCAGACACCTGGCCGAGTTTCATTGACAAGtaacagaaattacaatgtcTGTTTGAGTTCTGCTGTATTAAATTCATACTCAAAATTCTTGTAAAGGCCTTTATGAATGACCATTGTAATGCTCatatcataaaataaaaaccacagtGCTGTTACTGGGCAAGGGAGT
>XM_039783000.1
AAATGAACCTCAGTGAATTCCACAATCTCATTAGGAAATGGATGGGGTGGTGCCTGATcactgagggggaaaaaaagatgttGTCTTCAATATCACTCACACTAGAAACAGAGGAGTAAAATGCCAATGCAAAAAGACACTTGAACCCGGGACCCACCCTGAACAATGGTCTATATGtacactagctagctaaacaTCTCAGCACCACCTCTACAATGTCTTCcccagagagggaggaaaatgTTCCTGACCTGCAGCTAAGTTTTGTCTTTGGGAACAGTGTTGTCAATTCTCAATTCATTCTGCCCGAGGATGCAGAGGCACAGGAGCAACCTGAATATGACTTAACAGAGACATTATGTCTGAGCAGAACTCAGCTGAAACACGTTGCAGACAGTATTTTGAAAAATAGCACACTAAAGTATTTATATCTCGAAGGCAACCACATATCCAGTATCCCAGATTCAATGTTCATCAGCTTGCCCAACCTCCTGTGGCTGGACCTCAGAAATAACCAAATTGCATCGCTCCCTGCTGAAGTTGGCTTGCACAGATCTCTGAAAACAATACTTCTGGAAGGAAACCCCATCTCAGAACTTCCACCAGAGTTGGGAAATGTGATTACCCTCAAAGGCTTGAACCTAAGGAATTGCCCCATCAGTTTCCCTCCACAAGACATTGTGAACCAGGGACTCCAGAGGATCCTCCAGTACCTCAGGAGTGCGATGGCTAGTCGGCCCGTTAGCATGAGAAGGAGCCCCTCAGAGTTGCCAGTGGTGGAGAAGCTCCAGCTGTCAGAGCTGATGGGGTCCAGTACGGAGGAGCAGGATGATTCAGGTGACGAGCTGCAGAAGTTCATGGAGCTCAAACACAAGATGTTCCTGCTGGACAAAGCTGAGCTGGGCTCAACAGCACAGGGTGATATAACCCCAAAGTCACACCGCCTTTCTGTTATCCAAAAAAAAAAGGCAACTACCAAGGCTGGCATAATTCCCGAGCCCCCCCTGTTTGACACTCGGCATTGGAAGAGGCCAGAAGACAGGAAACAGGCTGCAATGAAAGAGCTGAAGGAGAAACAGGCTATTCTCGAGCAGAGAAAAAAAAGCCAAGACACTCTTCGGAAGTGGCGTACACAAGCCATGACCACACGGGGGAAGAACATGTCTCAACACCAGCAGAGGAAGCATGCACAACAAAGAAACCAAGAGGAAGCGGACACAAATTCAAAAGCTGGTGTGGAGGACAGCGGTGATACTCGCCAGGGTCAGACGTCCTGCGTGTCTATCAAAGATTGTGAGGAGACCAGGTCAGCCCGTGAGCTGGAGCGCCAGATACGCTCACGTGTCGAGAAGATGCAAGAGAGACGCAGGAATCCCAGGGGCACGAGCACAGAGCAGATGGCAGCGTCAGAGCAAGATGTGGAGGAGATGAGGAAGCTACAGGCTCGCCTTCTAGAGAGGAAGCGTAATCGAGGAAGAGATCGTGAAAATAGTTTCAATATCTTCACAGCAGACACCTGGCCGAGTTTCATTGACAAGtaacagaaattacaatgtcTGTTTGAGTTCTGCTGTATTAAATTCATACTCAAAATTCTTGTAAAGGCCTTTATGAATGACCATTGTAATGCTCatatcataaaataaaaaccacagtGCTGTTACTGGGCAAGGGAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782997.1 True 1699 mRNA 0.47 11 26866133 26873668
XM_039782998.1 False 1672 mRNA 0.48 11 26865625 26873668
XM_039782999.1 False 1675 mRNA 0.48 11 26866039 26873668
XM_039783000.1 False 1677 mRNA 0.48 11 26865808 26873668

Neighbor

gene id symbol gene type direction distance location
LOC120547700 plac9 coding upstream 98287 26758333 ~ 26767338 (+)
mcfd2 mcfd2 coding upstream 243055 26619417 ~ 26622570 (+)
calm2a calm1,LOC102778633,LOC102293206,LOC107396020 coding upstream 333899 26527783 ~ 26531726 (+)
si:ch73-105b23.6 LOC104955877 coding upstream 344048 26495508 ~ 26521577 (+)
plekhh2 plekhh2 coding upstream 388898 26414524 ~ 26476727 (+)
valopa valop,LOC104938804,LOC106940109,LOC107093123 coding downstream 303300 27176968 ~ 27206666 (+)
LOC120548504 kndc1 coding downstream 934636 27808304 ~ 27878568 (+)
vox NA coding downstream 1012575 27886243 ~ 27887609 (+)
vent NA coding downstream 1017782 27891450 ~ 27900204 (+)
blnk NA coding downstream 1358127 28231795 ~ 28275999 (+)
G197069 LOC103370964,LOC104925911,LOC102295618,LOC103148144 non-coding upstream 119540 26740257 ~ 26746085 (+)
G197035 LOC104925924,LOC104948680,LOC103376065 non-coding upstream 237923 26624635 ~ 26627702 (+)
G197029 NA non-coding upstream 325490 26539844 ~ 26540135 (+)
G197027 NA non-coding upstream 332391 26533032 ~ 26533234 (+)
G196967 NA non-coding upstream 554339 26291118 ~ 26311286 (+)
G197084 nkx6-2,LOC102789131 non-coding downstream 191058 27064726 ~ 27104508 (+)
G197087 NA non-coding downstream 242298 27115966 ~ 27116514 (+)
G197089 NA non-coding downstream 268903 27142571 ~ 27142786 (+)
G197137 NA non-coding downstream 391611 27265279 ~ 27265508 (+)
G197143 NA non-coding downstream 425500 27299168 ~ 27299994 (+)
tmem254 NA other upstream 129838 26725716 ~ 26735787 (+)
G197053 NA other upstream 201840 26663159 ~ 26663785 (+)
stpg4 LOC103353520,LOC101467386,LOC102793681,LOC102299197 other upstream 316865 26535284 ~ 26548760 (+)
LOC120548053 LOC103353497,LOC102790632,LOC102299158,LOC102194143,LOC101482614,LOC100706574 other upstream 1039196 25817251 ~ 25826429 (+)
prdx3 prdx3 other upstream 1244950 25613407 ~ 25620675 (+)
pwwp2b pwwp2b other downstream 547 26874215 ~ 26953805 (+)
LOC120547882 inpp5a other downstream 52750 26926418 ~ 27109140 (+)
LOC120548261 LOC102312438,LOC102207415,LOC101470427 other downstream 578282 27451950 ~ 27511592 (+)
LOC120548047 adgra1,LOC103360772 other downstream 681260 27554928 ~ 27781041 (+)
ccnj ccnj,LOC102785723 other downstream 1420537 28294205 ~ 28302333 (+)

Expression


Co-expression Network