npas4l (LOC101471891)


Basic Information

Item Value
gene id npas4l
gene name LOC101471891
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 23855715 ~ 23860867 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039783049.1
ttttttatttattttttttccctcttcccCACCGGCTGAGTTGGATGAGTTGGGTCGTGTTTGCGGGCTATAAAAGAAGGGACGCAGACACTCCTCATCCAGACCAGAGCCTGCAGAGGTGGTTACATCAGCTTCGAAATGAATATTTGGTGCAAATCGTGCAAATGTCATGTTAGTGCTCCGTGCAcctctcatcatcatcatcatcatcatcatcatcgtcatcatctgCCCGAGGGTCACCGCACCTCCTTCTGCAGGAGGTTCAGATCCACCAAAGGAGCGTCCAAAGCCCGACGGGACCACATCAATCATGAGATCAGGAATATGCGCGCTCTGTTGCCCATCACCCAGGAGGACCAGGAGCGTCTCTCCTACCTGCACTCCATGGCCGCCATCTGCGCCTACATCAGGAAGTCTGTTCTCTTCCAGGGACTCCCAGCTGGGGTGAGAGAACACTGCTCTCTGCCATACGAGGCCTTTCTTCAGGCCCTGCACGGCTTCATCCTGGTCACTACCGCGCAGGGGAGGCTGGTCTATGTGTCCGAAAATGCAGCTGAATATCTCGGTCTTTCCATGATAGATGTGCTTCAAGGAGACACTTTCTATGACATGGTTGAATGCTCTGACATCGATATTGTTAAATCAAACCTGGACATTAAAAACAACTCGTCATCAGAGAGGAGCTTTATATGTTGTATGCAAACCTCCAAGGCCTTCAAGCAGCAACACGGCAGCTGCTGTTCCATGATGGTCAGAGGGAGCTTCCAGTCTTTCCCTCAGCCTTGTCCGTCCTCGTCTTCAGCCTGTCCCAACAACCAGCCTCTGTTTGTGGCCCTCTGCACCCCCACGGCCAACCGCCTGCGGAGCTCGGACTCCCACTTCTGTCACAGCTTCAGCAGTGTCCACAGACTCGATATGTCCTTCACTCAGCTGTCCGACAGTGTTGTATATTTTTTGGGGTGTTCGGCAGAAGAGATGACCGGTCGGTCGTGGTACGGTCTTGTCCACCCTGAAGATCTTTCTTTGAGTGCAGATTCCCACAGAAGTTTAATGCAGGCAGATGATGGCTTGCAGGTAGAGATGGTGCTCAGGCTCCAGTGTAAGGATCTCTCGTGGACCTGGGTCTACATTCGAGCTAACAAAGACTCTGAGTGCCAGAGCGTGAGCTGCGCTAACTTCATCATCAGtGAAACGGAGGCCAGATTTCTGCAGGAGAAAATCAGCAGCGATGCCTTCAGGCCATCATCTCTATCTCTGGCAAATTCCTGCCATTTTGCGGCTCAACAGGCGCCCCATGCTCAGAGCCAAAACAACACTAAATGCTTTAAAAGACAGAGGAGTTCTGACAGCCAAAGCGAGGAGCCAGGTGCCAAAGCTAGGCAGGAGTCCGAGCGAGACTTATACTTTGTGGCGTGCGTCTCCTCCCGAGGCGATAGCTCACCTGTTCCCTTGGGTGACAGCCCTGCTCTCTTCACCCCTCCCTACAGCCCGGCCTCCTCCAGCTCCCCTCTGCAGCAGCGGGAGCTCAGCCATGACCTCCTGATGGATGTGCATGGATACACAGATCAGCTGTTGTCCTCCCCTGAGTGCTCTCCCTCTTATTATTCCTACCCAGAGGCAGGGCTCACCTGTCACCAATCGCCCTCCGACTCCCTCCCTGCAGCCGCTGAACAAACCTTTGATCAGGCAGCCtctccactctcctcctcctcctcctcctctccgaCCTACGATTTCCAAGCTTGTTCTGCCGATACTCGATTAGTTCCTGACTGCCTGTCTGTGTCGGACATGTGTGAGAGCCCCGTGGACTGTGCTCTGCATCAAGACGACTTCAGCCTTCTAGAGCAGCCACAAGGGGGCAGCCTTGTCCAAGTGCATCATGTTCCCCACCATGTGTTGCCCATACATTCCAGCCTTCTTACCCCCAACCAATCTCCCACATCCACAGAGTCTAACCATTACAACGAGAGGGAACAGGCAGAGATCAGTATTCTGGCTGAGCAGATCTCCTCCCTGGCCAGCAGCTTTTCCATGTATCACACCCTAAGTCCGCTTCAAAATGTGGCCCAACCTGCCACCACTAACACCCTGCCCTCCGCCTGCGACTGGGCCCAtcatcctcctctcccctcaGCCCCTCCGCTTAAGCGCGAGATGGTCCTCGATGACGGCGTGTTCGACAGCATTCTGAAAGACCTGGACGCGGTTACAAGGAAAAGCAGCATGTCCGGCCCCGGTGATGTAGCATGCAGCTACCAACAGGGCTTGTTGCGCTGCAGGAGTGGGCCCCATCAGTTGGAGCAGGAGCCCCTCTGGCTATCCCCGCCCATCACAGAGGACCCGCTGCCTGCAGAGCAGTTCACTGCCATGGATCCCTTCAGTTTGCAGTCGGGACACTATGACCAAAACACTGAGTTGCATCAACTCAACCACTATATGCAGAGTGCCCTTCGGCAAGATGGACTTGCTGAAGAAAACCTGTACTGAAATAAGTCTGTGACTTACTGTACTACCACTTGTATGACATATTGTCAGGGCAATCTTCATCTTCGCTGGATTTAAAGACGAGTGAGCGAGAAAGATATTTAAGCGACATCTTTGCTTAGACACTGTTTCCTCAAAAGACTCATTTCTAAATGTAGAAGCATCCAAAGTAGATCATGTGCTCTTCAAGACAACAGCTTTGTCTTCATTTCTGAATACTGCTGtcagctgtgttttatgttttgctgATGTCTTACATTTTATGAAAAAGgtactttttaaaaacacttacACACTGAAATGGAGGTATATTTTTCTTCTAATGCTGAGTGACCACAGTTTACTATTGAGCACTTTATCAATGTCATTGCCACAAGAATTTTATGAATGAGAAGGCGTGCTGATTTAAAGGAGTATCACAGAGACTTCAAAGCTAACTGGCAGAGCTTTAACA
>XM_039783051.1
ATGTGTGTTTTGCCTTAGGTGGTTACATCAGCTTCGAAATGAATATTTGGTGCAAATCGTGCAAATGTCATGTTAGTGCTCCGTGCAcctctcatcatcatcatcatcatcatcatcatcgtcatcatctgCCCGAGGGTCACCGCACCTCCTTCTGCAGGAGGTTCAGATCCACCAAAGGAGCGTCCAAAGCCCGACGGGACCACATCAATCATGAGATCAGGAATATGCGCGCTCTGTTGCCCATCACCCAGGAGGACCAGGAGCGTCTCTCCTACCTGCACTCCATGGCCGCCATCTGCGCCTACATCAGGAAGTCTGTTCTCTTCCAGGGACTCCCAGCTGGGGTGAGAGAACACTGCTCTCTGCCATACGAGGCCTTTCTTCAGGCCCTGCACGGCTTCATCCTGGTCACTACCGCGCAGGGGAGGCTGGTCTATGTGTCCGAAAATGCAGCTGAATATCTCGGTCTTTCCATGATAGATGTGCTTCAAGGAGACACTTTCTATGACATGGTTGAATGCTCTGACATCGATATTGTTAAATCAAACCTGGACATTAAAAACAACTCGTCATCAGAGAGGAGCTTTATATGTTGTATGCAAACCTCCAAGGCCTTCAAGCAGCAACACGGCAGCTGCTGTTCCATGATGGTCAGAGGGAGCTTCCAGTCTTTCCCTCAGCCTTGTCCGTCCTCGTCTTCAGCCTGTCCCAACAACCAGCCTCTGTTTGTGGCCCTCTGCACCCCCACGGCCAACCGCCTGCGGAGCTCGGACTCCCACTTCTGTCACAGCTTCAGCAGTGTCCACAGACTCGATATGTCCTTCACTCAGCTGTCCGACAGTGTTGTATATTTTTTGGGGTGTTCGGCAGAAGAGATGACCGGTCGGTCGTGGTACGGTCTTGTCCACCCTGAAGATCTTTCTTTGAGTGCAGATTCCCACAGAAGTTTAATGCAGGCAGATGATGGCTTGCAGGTAGAGATGGTGCTCAGGCTCCAGTGTAAGGATCTCTCGTGGACCTGGGTCTACATTCGAGCTAACAAAGACTCTGAGTGCCAGAGCGTGAGCTGCGCTAACTTCATCATCAGtGAAACGGAGGCCAGATTTCTGCAGGAGAAAATCAGCAGCGATGCCTTCAGGCCATCATCTCTATCTCTGGCAAATTCCTGCCATTTTGCGGCTCAACAGGCGCCCCATGCTCAGAGCCAAAACAACACTAAATGCTTTAAAAGACAGAGGAGTTCTGACAGCCAAAGCGAGGAGCCAGGTGCCAAAGCTAGGCAGGAGTCCGAGCGAGACTTATACTTTGTGGCGTGCGTCTCCTCCCGAGGCGATAGCTCACCTGTTCCCTTGGGTGACAGCCCTGCTCTCTTCACCCCTCCCTACAGCCCGGCCTCCTCCAGCTCCCCTCTGCAGCAGCGGGAGCTCAGCCATGACCTCCTGATGGATGTGCATGGATACACAGATCAGCTGTTGTCCTCCCCTGAGTGCTCTCCCTCTTATTATTCCTACCCAGAGGCAGGGCTCACCTGTCACCAATCGCCCTCCGACTCCCTCCCTGCAGCCGCTGAACAAACCTTTGATCAGGCAGCCtctccactctcctcctcctcctcctcctctccgaCCTACGATTTCCAAGCTTGTTCTGCCGATACTCGATTAGTTCCTGACTGCCTGTCTGTGTCGGACATGTGTGAGAGCCCCGTGGACTGTGCTCTGCATCAAGACGACTTCAGCCTTCTAGAGCAGCCACAAGGGGGCAGCCTTGTCCAAGTGCATCATGTTCCCCACCATGTGTTGCCCATACATTCCAGCCTTCTTACCCCCAACCAATCTCCCACATCCACAGAGTCTAACCATTACAACGAGAGGGAACAGGCAGAGATCAGTATTCTGGCTGAGCAGATCTCCTCCCTGGCCAGCAGCTTTTCCATGTATCACACCCTAAGTCCGCTTCAAAATGTGGCCCAACCTGCCACCACTAACACCCTGCCCTCCGCCTGCGACTGGGCCCAtcatcctcctctcccctcaGCCCCTCCGCTTAAGCGCGAGATGGTCCTCGATGACGGCGTGTTCGACAGCATTCTGAAAGACCTGGACGCGGTTACAAGGAAAAGCAGCATGTCCGGCCCCGGTGATGTAGCATGCAGCTACCAACAGGGCTTGTTGCGCTGCAGGAGTGGGCCCCATCAGTTGGAGCAGGAGCCCCTCTGGCTATCCCCGCCCATCACAGAGGACCCGCTGCCTGCAGAGCAGTTCACTGCCATGGATCCCTTCAGTTTGCAGTCGGGACACTATGACCAAAACACTGAGTTGCATCAACTCAACCACTATATGCAGAGTGCCCTTCGGCAAGATGGACTTGCTGAAGAAAACCTGTACTGAAATAAGTCTGTGACTTACTGTACTACCACTTGTATGACATATTGTCAGGGCAATCTTCATCTTCGCTGGATTTAAAGACGAGTGAGCGAGAAAGATATTTAAGCGACATCTTTGCTTAGACACTGTTTCCTCAAAAGACTCATTTCTAAATGTAGAAGCATCCAAAGTAGATCATGTGCTCTTCAAGACAACAGCTTTGTCTTCATTTCTGAATACTGCTGtcagctgtgttttatgttttgctgATGTCTTACATTTTATGAAAAAGgtactttttaaaaacacttacACACTGAAATGGAGGTATATTTTTCTTCTAATGCTGAGTGACCACAGTTTACTATTGAGCACTTTATCAATGTCATTGCCACAAGAATTTTATGAATGAGAAGGCGTGCTGATTTAAAGGAGTATCACAGAGACTTCAAAGCTAACTGGCAGAGCTTTAACA

Function

NR:

description
neuronal PAS domain-containing protein 4A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039783049.1 True 2944 mRNA 0.51 10 23855715 23860867
XM_039783051.1 False 2844 mRNA 0.51 9 23855982 23860867

Neighbor

gene id symbol gene type direction distance location
ntpcr ntpcr,LOC103137650 coding upstream 85295 23766603 ~ 23770420 (+)
map10 NA coding upstream 90333 23762408 ~ 23765382 (+)
tsnax tsnax coding upstream 297872 23549140 ~ 23557843 (+)
gpr137ba gpr137b,LOC104924458,LOC103372484 coding upstream 361548 23488234 ~ 23494167 (+)
LOC120547587 ggps1,LOC102790345 coding upstream 503994 23337381 ~ 23351721 (+)
zmp:0000000755 LOC100695905,LOC101469954,LOC102307746,LOC103371009 coding downstream 201888 24062755 ~ 24122075 (+)
klc1b klc4,LOC102306811 coding downstream 269917 24130784 ~ 24160603 (+)
ptk7b ptk7 coding downstream 351105 24211972 ~ 24245841 (+)
srfb srf coding downstream 387331 24248198 ~ 24268024 (+)
ablim1a ablim1,LOC102784938,LOC102304155 coding downstream 423779 24284646 ~ 24329241 (+)
G196195 NA non-coding upstream 311877 23543607 ~ 23543838 (+)
G196184 NA non-coding upstream 322656 23497168 ~ 23533059 (+)
G196174 NA non-coding upstream 385271 23467294 ~ 23470444 (+)
G196140 NA non-coding upstream 501374 23353972 ~ 23354341 (+)
G196124 NA non-coding upstream 594660 23258136 ~ 23261055 (+)
LOC120548378 NA non-coding downstream 9677 23870544 ~ 23874163 (+)
G196328 NA non-coding downstream 190322 24051189 ~ 24124149 (+)
G196336 NA non-coding downstream 299746 24160613 ~ 24162215 (+)
G196337 NA non-coding downstream 303333 24164200 ~ 24164631 (+)
G196332 NA non-coding downstream 407406 24268273 ~ 24270052 (+)
klhdc3 klhdc3 other upstream 4110 23818914 ~ 23851605 (+)
disc1 disc1 other upstream 244378 23562283 ~ 23611337 (+)
tasp1 tasp1 other upstream 1163111 22647914 ~ 22692604 (+)
kif16bb NA other upstream 1671223 22155402 ~ 22184492 (+)
G195653 LOC102296834 other upstream 2340587 21514526 ~ 21515128 (+)
LOC120547848 LOC103369904,LOC106907288,LOC107081732 other downstream 497059 24357926 ~ 24367599 (+)
LOC120548495 ate1 other downstream 507087 24367954 ~ 24426502 (+)
G196439 wdr11 other downstream 703683 24564550 ~ 24569167 (+)
dact2 dact2,LOC103391347 other downstream 1147607 25008474 ~ 25013249 (+)
cacul1 cacul1,LOC103374658,LOC102794354 other downstream 1278180 25139047 ~ 25144254 (+)

Expression


Co-expression Network