LOC120547578


Basic Information

Item Value
gene id LOC120547578
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 23112659 ~ 23126098 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039783053.1
TGTCATGAGTCCATAGTTATTCGAAACAGAGGAGCACGGATATACGCAGGACGAGGAGCAGTATTGTGAGCTTTGTACTTTATGTCATTTGAGCTGAAAGTCCGACAGCTTCGTCATTAACGATGGAAACTGGAAACTATGTTGCTAGACTAAACGAGTACGTACAGAAAACAAGCTCTAAGATGCAATATGAAGACGTCGGCTCTGTTGGCCCCGCTCATCTTAAAATATTCACCCAGAGGGTAGTCCTAAATGGAAAGGTCTATCCAGATGGTGTGGGAAAGAACAAGAAGGAAGCCAAACATAATGCGGCTAAAAATGCCCTGAAATGCTTGTTCAACATCGAACATCAGGACTCAGTTGACACAACAGAAAATGCAGCTGAAGCTCCTTCTGAACCAGCTCATCCGAGTAATATCAGTAACATCAACTATATATGTTGGCTCAATGAATATGGTCAGAGGAACAGGTTGACCATAAGAGCTGTGGAGACAACAAGACTGGGACCAAATAATGCTACTCCaAGCTGTAGCTTCGTGGTTGGTGATAATGAGTATCCAGCTGCCATTGGAGGAACAAAGAGGGAAGCTAAGGAGGAAGCAGCCAAGCTTGTATATGATGTGATATGTGGCAGTAAAACTACAGAGacTGCAGATGAGAATCACAACCCCACATCAGCTCAACGAAAGGAGGAAACAAATCAACATGTTTTTGATATCTGTAATACGACAGGACGCCTCAGTATGAACTCTAAGGACAGCAGTATTACAGAGGCAAATTACATAGGAATTGTCAACCACTactgtcagaaaaaaaacatccaccaTACATTTATTGAGGAACGGAGATGCGGTCCATCTCATGACCTTCAATTTTTCTACAAACTAGTGATCAACGATAAGGAGTACCATGTGGGTGAGGGTAAGAGTGTAAAGGAAGCCAAACAAAAAGCAGCTCAGCTGGCCTGGTCTGCTCTTCAAGAACAGACAGACTGGGACAGCAagGTGTCCGTCCGGTCAACAGTGTCCGAAGATGGTGCACCACCTATGTTCTCACCGCAATCAACTACCCTGGAGTCCCATGAATCATCATCACAAAGCACATCAATGAGCACAAGTGGATCAATAATATTCGCTGATTCATCAAACCTTCCCAAGGCTCAGATTCCCATAAGGTCAACTGCATCTGAAGATGATGCCAGATTGTCAACATCACTGGAGTCACTTTCATCGTCACAAAGTATGTCAACGGGTACAAGTGGCTCAGGAATATTCACTGATTCATCCAACTCTTCCAAGGATCAGCATGTTGCCAAAGACAAGAATATGGGGATAAGTCAGAATGAGACATCCACCCAGTTAAGTGTTAATCTTGACAGGTTTACTTCAGACTTTGAGCCCATGGAGTGTCTTGGCAGTGGAGGTTTTGGTCATGTTTACAAAGCAAGAGAGAAACTGCTGGAGAAGGATTATGCTGTCAAAATCGTCTACTATGATGAAAAAGCTCTAAGAGAGGTGAAGACATTATCAGACCTGCTCCACCGTAATATCGTCAGATACTATACAGTTTGGACGGAGGATTCAGGATACAAATGGGACAGTTCCACTGGCAGGAACAGATCTTCCCAAAAGTACCTCTATATTCAGATGGAGTTATGTGACACCAAAACCCTTATAGACTGGATTGATGAGAAGAACAATCAGTCTCCCCAAGACTCAAAGAGAAGAGAACAAAGTCTCAGCATTACTCAGCAAATAGTTAGTGGAGTGGAATATATTCACTCCAAGAATCACATCCACAGGGACCTTAAGCCTGCAAACATCCTGTTTGGACTGGATGGAGAAGTGAAGATTGGGGACTTTGGTCTGGTCACCAGAGATGATGATGCTTTGATggacagaacagagaacacagGAACCCGGTCTTACATGGCTCCTGAACAAaggaagaagaactATGACCGAAAAGTGGATATATTTGCTCTGGGCTTGATATATTTGGAACTTCTTTGGAAAGTCTCTACTGGCCACGAAAGACGAGTGGTTTTGGATGACGCAAGATATCAGAATCTTCCCAAAGACTTTTCAAAGGCTTTTCCCCAAGAGaaCAATGTCATCAAGTTAATGCTGCGTGAGAAGCCAGAAGACCGACCTGATGCCAGTAAACTGAAGGCAGAGCTGGAGAAGTGGGCTCAGACATTCAGCACAAAAAATGTGCGTCAGGAAAATGCAACTGTCTGATTATCACAAGCAATTGTGAGAAGCTACATTAGCATATAGAAACGTGGCTCTTCTGATGTCTGTGACTTAAATCAAATGATCTGATATACTGTTATAAATATGTTGTTATTAacatttttatgaaaatgtttaatgtacTGCACTTGTATAGCGCTTTATCCTGAACTTTAAATTACGCTCCTATGGCAGTGGGTGGTAATTTGGGGTTCTATgttttgctcaaggacacttcaacatgcAAACAGGAGCTGGAATTATTAACCCTGCAAATGATGAATAACCTAAGAAGGGGACCTAATATTATGTGTTTTAAAGGACagggaaagaaaaatgaaatcaaGTTTTATCATGATACTTTTACATGAATTCACATCCGTCCAGCTTTTATTCTAAATAATGTCTGTAATTTCTGTGTTCACAGTTGACATTTTATTCTATGCTGGAAAtggttaaatgtatttaaagtggTGTCACATTACAGCCTTTGTTTTGTACTGAATACCGGTATGTTaagttttaaaaattaaataatggtTATTTGGAGCATAATGGTCATGCATCTACAGTCCCGACTGCGACATCAGTGGCACCGCACTCTCCTGGGTTCCGTTCCTATCTCACCAAGAGACAACAGTTCACACACATCAACAACTGCAACATGCAGCATCCTCTATGGTTCACCTGCAAAAGCCTTAAATAAACTCCAATACATCCAAAA
>XM_039783054.1
TGTCATGAGTCCATAGTTATTCGAAACAGAGGAGCACGGATATACGCAGGACGAGGAGCAGTATTGTGAGCTTTGTACTTTATGTCATTTGAGCTGAAAGTCCGACAGCTTCGTCATTAACGATGGAAACTGGAAACTATGTTGCTAGACTAAACGAGTACGTACAGAAAACAAGCTCTAAGATGCAATATGAAGACGTCGGCTCTGTTGGCCCCGCTCATCTTAAAATATTCACCCAGAGGGTAGTCCTAAATGGAAAGGTCTATCCAGATGGTGTGGGAAAGAACAAGAAGGAAGCCAAACATAATGCGGCTAAAAATGCCCTGAAATGCTTGTTCAACATCGAACATCAGGACTCAGTTGACACAACAGAAAATGCAGCTGAAGCTCCTTCTGAACCAGCTCATCCGAGTAATATCAGTAACATCAACTATATATGTTGGCTCAATGAATATGGTCAGAGGAACAGGTTGACCATAAGAGCTGTGGAGACAACAAGACTGGGACCAAATAATGCTACTCCaAGCTGTAGCTTCGTGGTTGGTGATAATGAGTATCCAGCTGCCATTGGAGGAACAAAGAGGGAAGCTAAGGAGGAAGCAGCCAAGCTTGTATATGATGTGATATGTGGCAGTAAAACTACAGAGacTGCAGATGAGAATCACAACCCCACATCAGCTCAACGAAAGGAGGAAACAAATCAACATGTTTTTGATATCTGTAATACGACAGGACGCCTCAGTATGAACTCTAAGGACAGCAGTATTACAGAGGCAAATTACATAGGAATTGTCAACCACTactgtcagaaaaaaaacatccaccaTACATTTATTGAGGAACGGAGATGCGGTCCATCTCATGACCTTCAATTTTTCTACAAACTAGTGATCAACGATAAGGAGTACCATGTGGGTGAGGGTAAGAGTGTAAAGGAAGCCAAACAAAAAGCAGCTCAGCTGGCCTGGTCTGCTCTTCAAGAACAGACAGACTGGGACAGCAagGTGTCCGTCCGGTCAACAGTGTCCGAAGATGGTGCACCACCTATGTTCTCACCGCAATCAACTACCCTGGAGTCCCATGAATCATCATCACAAAGCACATCAATGAGCACAAGTGGATCAATAATATTCGCTGATTCATCAAACCTTCCCAAGGCTCAGATTCCCATAAGGTCAACTGCATCTGAAGATGATGCCAGATTGTCAACATCACTGGAGTCACTTTCATCGTCACAAAGTATGTCAACGGGTACAAGTGGCTCAGGAATATTCACTGATTCATCCAACTCTTCCAAGGATCAGCATGTTGCCAAAGACAAGAATATGGGGATAAGTCAGAATGAGACATCCACCCAGTTAAGGTTTACTTCAGACTTTGAGCCCATGGAGTGTCTTGGCAGTGGAGGTTTTGGTCATGTTTACAAAGCAAGAGAGAAACTGCTGGAGAAGGATTATGCTGTCAAAATCGTCTACTATGATGAAAAAGCTCTAAGAGAGGTGAAGACATTATCAGACCTGCTCCACCGTAATATCGTCAGATACTATACAGTTTGGACGGAGGATTCAGGATACAAATGGGACAGTTCCACTGGCAGGAACAGATCTTCCCAAAAGTACCTCTATATTCAGATGGAGTTATGTGACACCAAAACCCTTATAGACTGGATTGATGAGAAGAACAATCAGTCTCCCCAAGACTCAAAGAGAAGAGAACAAAGTCTCAGCATTACTCAGCAAATAGTTAGTGGAGTGGAATATATTCACTCCAAGAATCACATCCACAGGGACCTTAAGCCTGCAAACATCCTGTTTGGACTGGATGGAGAAGTGAAGATTGGGGACTTTGGTCTGGTCACCAGAGATGATGATGCTTTGATggacagaacagagaacacagGAACCCGGTCTTACATGGCTCCTGAACAAaggaagaagaactATGACCGAAAAGTGGATATATTTGCTCTGGGCTTGATATATTTGGAACTTCTTTGGAAAGTCTCTACTGGCCACGAAAGACGAGTGGTTTTGGATGACGCAAGATATCAGAATCTTCCCAAAGACTTTTCAAAGGCTTTTCCCCAAGAGaaCAATGTCATCAAGTTAATGCTGCGTGAGAAGCCAGAAGACCGACCTGATGCCAGTAAACTGAAGGCAGAGCTGGAGAAGTGGGCTCAGACATTCAGCACAAAAAATGTGCGTCAGGAAAATGCAACTGTCTGATTATCACAAGCAATTGTGAGAAGCTACATTAGCATATAGAAACGTGGCTCTTCTGATGTCTGTGACTTAAATCAAATGATCTGATATACTGTTATAAATATGTTGTTATTAacatttttatgaaaatgtttaatgtacTGCACTTGTATAGCGCTTTATCCTGAACTTTAAATTACGCTCCTATGGCAGTGGGTGGTAATTTGGGGTTCTATgttttgctcaaggacacttcaacatgcAAACAGGAGCTGGAATTATTAACCCTGCAAATGATGAATAACCTAAGAAGGGGACCTAATATTATGTGTTTTAAAGGACagggaaagaaaaatgaaatcaaGTTTTATCATGATACTTTTACATGAATTCACATCCGTCCAGCTTTTATTCTAAATAATGTCTGTAATTTCTGTGTTCACAGTTGACATTTTATTCTATGCTGGAAAtggttaaatgtatttaaagtggTGTCACATTACAGCCTTTGTTTTGTACTGAATACCGGTATGTTaagttttaaaaattaaataatggtTATTTGGAGCATAATGGTCATGCATCTACAGTCCCGACTGCGACATCAGTGGCACCGCACTCTCCTGGGTTCCGTTCCTATCTCACCAAGAGACAACAGTTCACACACATCAACAACTGCAACATGCAGCATCCTCTATGGTTCACCTGCAAAAGCCTTAAATAAACTCCAATACATCCAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039783053.1 True 2958 mRNA 0.42 19 23112659 23126098
XM_039783054.1 False 2943 mRNA 0.42 19 23112659 23126098

Neighbor

gene id symbol gene type direction distance location
LOC120547579 NA coding upstream 2088 23099915 ~ 23110571 (+)
LOC120547580 NA coding upstream 18419 23084932 ~ 23094240 (+)
gpatch11 gpatch11,LOC102790129,LOC102788696 coding upstream 28753 23080979 ~ 23083906 (+)
vit vit coding upstream 80527 23011389 ~ 23032132 (+)
LOC120547567 LOC104953149,LOC103387627,LOC103374175 coding upstream 103440 23002004 ~ 23009219 (+)
LOC120547586 ggps1,LOC102790345 coding downstream 177106 23303204 ~ 23319036 (+)
LOC120547587 ggps1,LOC102790345 coding downstream 211283 23337381 ~ 23351721 (+)
gpr137ba gpr137b,LOC104924458,LOC103372484 coding downstream 362136 23488234 ~ 23494167 (+)
tsnax tsnax coding downstream 423042 23549140 ~ 23557843 (+)
map10 NA coding downstream 636310 23762408 ~ 23765382 (+)
G196028 NA non-coding upstream 77868 23032452 ~ 23034791 (+)
G196017 NA non-coding upstream 121957 22990433 ~ 22990702 (+)
G196016 NA non-coding upstream 122769 22989684 ~ 22989890 (+)
G195973 NA non-coding upstream 148529 22963967 ~ 22964130 (+)
G195968 NA non-coding upstream 187997 22922776 ~ 22924662 (+)
G196036 NA non-coding downstream 10348 23136446 ~ 23144652 (+)
G196057 NA non-coding downstream 20714 23146812 ~ 23147635 (+)
G196111 NA non-coding downstream 63502 23189600 ~ 23190156 (+)
G196124 NA non-coding downstream 132038 23258136 ~ 23261055 (+)
G196140 NA non-coding downstream 227874 23353972 ~ 23354341 (+)
tasp1 tasp1 other upstream 420055 22647914 ~ 22692604 (+)
kif16bb NA other upstream 928167 22155402 ~ 22184492 (+)
G195653 LOC102296834 other upstream 1597531 21514526 ~ 21515128 (+)
fbxo11a fbxo11,LOC104951339 other upstream 1780082 21318610 ~ 21332577 (+)
G195518 NA other upstream 2358850 20752773 ~ 20753809 (+)
disc1 disc1 other downstream 436185 23562283 ~ 23611337 (+)
klhdc3 klhdc3 other downstream 692816 23818914 ~ 23851605 (+)
LOC120547848 LOC103369904,LOC106907288,LOC107081732 other downstream 1231828 24357926 ~ 24367599 (+)
LOC120548495 ate1 other downstream 1241856 24367954 ~ 24426502 (+)
G196439 wdr11 other downstream 1438452 24564550 ~ 24569167 (+)

Expression


Co-expression Network