LOC120547725 (LOC104935158,LOC103367215)


Basic Information

Item Value
gene id LOC120547725
gene name LOC104935158,LOC103367215
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 33480401 ~ 33507482 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039783344.1
ccccctcccctctgtcaGGGCCCTCTGCTGTGGCTATGGCTtggtttctgtgtctgtgtgtgattttgGCCGTGGGCCTGGCTTTGCTAGCGCTGCGCCTGAAGCTCAAGATGTCCGCTCGTGGCCCCCAGGAGCCCCCCCGCCTCCCAGCGCTACCCCTGATCGGCAGTCTGCTGAGCCTGCGGAGCCCACACCCTCCTCACGTGCTTTTTAAAGAACTGCAGAAGAAATACGGACGGACGTACTCTCTGATGATGGGCTCCCACTGTGTCATCGTCATCAACCAGCACACACACGCCAAAGAAATCCTGCTGAAGAAGGGAAAGATATTTGCAGGAAGACCCAGAACTGTAACCACAGACGTCCTGACCAGAGATGGGAAAGACATTGCGTTTGGAGACTACAGCGCTACCTGGAGATTCCACAGGAAGATAGTCCATGGAGCCCTGTGCATGTTTGGGGAGGGCTCTGCCTCCATCGAGAAAATGATCTGTGCAGAGGCCCAGTCCCTGTGCTGCGTCCTGTCTGAGGCAGCAGCTGCTGGACTGGCCCTGGATCTGTCTCCTGAGCTGACTCGGGCCGTCACCAACGTCATCTGTTCGCTCTGCTTCAACTCCTCGTACCGCCGCGGGGACCCAGAGTTTGAGGCCATGCTGCGCTACAGCCAGGGCATCGTGGACACTGTGGCAAAGGACAGCCTGGTGGACATCTTCCCCTGGTTACAGATGTTTCCTAATGCAGACCTGCGTCTTCTGAAGCAGTGTGTTTCAGTCAGAGACGAACTTCTTCAGAAGAAATATGATGAACACAAGGCAGACTACAGTGACCATGTGCAGAGAGACCTGCTGGACGCGCTGCTGAGAGCCAAACGCAGCGCTGAGAACAACAACACCGCAGGGATCAGTGCCGAGTCGGTGGGCCTCAGTGACGACCACCTCCTCATGACTGTGGGAGACATCTTTGGAGCTGGCGTGGAAACCACCACAACTGTGCTTAAATGGGCCATCACGTACCTCATCCATTACCCACAGGTGCAGAGGCGTATCCAGGAGGAGCTGGACAGTAAGGTGGGGGAGGACCGGTCCCCCCAGCTCAGTGACAGAGGCAGTCTACCCTACCTGGAGGCCACCATCAGGGAGGTGTTACGGATCCGCCCTGTGGCCCCGCTGCTCATCCCCCACGTGGCCCTCAGTGACACCAGCATAGGGGATTTCACAGTGAGGAAAGGAACTCGCGTCATCATCAACCTGTGGTCTCTGCACCATGATGAGAAGGAATGGAAATACCCAGAGCTCTTTGACCCTGGCCGGTTCTTGAACAGTGAAGGCACAGGGCTGATCATCCCGTCGTCCAGCTACCTGCCGTTTGGCGCCGGTCTCCGGGTGTGTCTGGGCGAGGCCTTGGCCAAGATGGAGCTTTTCCTCTTCCTGTCGCGGATCCTCCAGCGCTTCACCTTCTCTGTCCCAGCGGGTCACTCTCTGCCCAGTCTGGAGGGTAAGTTTGGTGTGGTCCTCCAGCCGGCCAAGTACAAGGTGAATGCCGTGCCCAGACCAGAGGGCGACAACATGCCGCGGTCTTTCTTGGTAAAGAAACATCACATCGCTAAGAGAGCAAACTATGGAAGACTGAGCTCAAACACTGAGGAGGTCCCCTGCAGCCCCCATGAAGACTCTGTGCTGCACAATGACATCCCCCCTCGTCATCATTGTCCAGCCACAAGCCCATGGCTATTCcagtccctctcctcctcctcctgtcctctttctctcagaGCAGACCGACTGCATCTGCCATCTTCTCCAAACACCCCCCCTTTCTCCTTTTTGGGCCACTCTTCAGAGGGCTACATTAGAAGCCCTGCAGATGCCTACAAGCCAGCTGAATCCTGCACCAAAGGGAACCTGGGAATCCAGTGTGTCACAGGAGAccacaggaggagagagaaccTCATCCCTTCGTCCCTCCCTCTCCTGGCCCTCTTTCCGACCATCCCTCACGGCAGCAGCCAGGGGAGCTTTGCGTGTTTGGACTGTAAAGAGTACTTGAGCTCCTCGGGCCTGGCCAAACACGAGCAGCTCCAGTGTGAGTGGAGCAGTAAGAAGCACTTCAGCTGTAAGTACTGTGAGAAGGAGTACGTCAGCCTGGGAGCGCTCAAGATGCacatcaggacacacacactgccctgtgtgtgtaaacTCTGTGGCAAGGCATTCTCCAGACCCTGGCTGCTTCAGGGACATATACGAACACACACAGGAGAGAAGCCGTTCTCGTGCCTACACTGCAGCAGAGCTTTTGCTGACCGATCCAACCTGCGAGCTCACCTCCAAACCCACTCTGAAGTGAAAAAGTACCAGTGTGCAAGCTGCTTCAAGACCTTCTCTAGGATCTCACTGTTGGCCAAGCACCATGAGTCTGGCTGCCCGCTGTCCTGACTGTGAACGTCTTCCTGCTCCAAAATACTCTTCTGTAGAGTCTCACTGAACAACCGTGGCTTTGAAACAAAAACCGGCTAGGAGGTTTGCACAGCTTGGTGTGGATCACAAAACCTGCATGCCTAAGCAGTGGAAAACAAGCTAGCGTCTGAtgacaaaacaattatttcacAGAGTTTGACAAAATAGTGTATTGACATCTGTAGCTTGCTGTCAGAAACCACTTAGTTACTTAAGTGTATATGTGTCCAACTAACATGTATTTTGAAGTGTTTACAATGTTGCACAGATTGAGTCAGCATGAAGCAGCCACACATGTATTTAAATGTTCCTTTTGCTCTTATTGCCTGGTAACAGTGATGTTAGAACTGACCCCCACATCACCCCCACACAATAATAAGAGGAATAGGTCACACATTATCAGGCTGTATCACAGTAATGGTTTGTGTTGTTTGATTCACTGTGACAGAGAGGGGTGACTGTGGTGAGCAGAGGGTTTGCAGAGGAGATGGCTGTGTTAGATGTGTTACTGAAAAAAGATTACGGAGTCTTTCTTCAGTTTGCTTAATCCCCTTATTCTCATTCGCTGTCATCGCAAACTTGTTGGAGAAAACACAACGGCCCAGTCACAGTTCTTGAAGTCCCCAAGTGGGATCTGccttaggccggctacacactggctgcgtggcgtgagcgtggcgtgagcgtggtgtgagcgtggcgtgagcgtggcg

Function

NR:

description
PREDICTED: steroid 17-alpha-hydroxylase/17,20 lyase isoform X1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen molecular_function
GO:0004497 monooxygenase activity molecular_function
GO:0005506 iron ion binding molecular_function
GO:0020037 heme binding molecular_function

KEGG:

id description
K00512 CYP17A; steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone deacetylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039783344.1 True 3169 mRNA 0.54 11 33480401 33507482

Neighbor

gene id symbol gene type direction distance location
nt5c2a LOC101476423,LOC102302397 coding upstream 15792 33425351 ~ 33464609 (+)
LOC120547582 NA coding upstream 67700 33395432 ~ 33412701 (+)
wbp1la NA coding upstream 88134 33381662 ~ 33392267 (+)
fbxw4 NA coding upstream 125030 33278972 ~ 33355371 (+)
fgf8a fgf8,LOC104933818,LOC106515330,LOC108239148 coding upstream 222226 33250788 ~ 33258175 (+)
trnaw-cca_27 NA coding downstream 194804 33702286 ~ 33702357 (+)
ctu2 ctu2 coding downstream 212317 33719799 ~ 33736992 (+)
chchd1 chchd1 coding downstream 463056 33970538 ~ 33976543 (+)
zswim8 zswim8 coding downstream 510895 34018377 ~ 34082623 (+)
ndst2a ndst2 coding downstream 584655 34092137 ~ 34124873 (+)
G198324 NA non-coding upstream 10618 33469558 ~ 33469783 (+)
LOC120548204 NA non-coding upstream 60841 33418697 ~ 33419560 (+)
G198292 NA non-coding upstream 123134 33356856 ~ 33357267 (+)
G198291 NA non-coding upstream 123677 33356354 ~ 33356724 (+)
G198287 NA non-coding upstream 203867 33275982 ~ 33276534 (+)
G198351 NA non-coding downstream 85111 33592593 ~ 33598024 (+)
G198352 NA non-coding downstream 102710 33610192 ~ 33610590 (+)
G198369 NA non-coding downstream 209215 33716697 ~ 33716951 (+)
G198488 NA non-coding downstream 344195 33851677 ~ 33851911 (+)
G198505 NA non-coding downstream 388388 33895870 ~ 33899177 (+)
slc2a15a LOC103367959,LOC104935160,LOC103476520,LOC106961144,LOC103155793 other upstream 280539 33157729 ~ 33199862 (+)
G198245 rab1a,LOC104962072,LOC102231865 other upstream 515327 32962388 ~ 32965074 (+)
G198185 NA other upstream 685740 32793288 ~ 32794661 (+)
G197999 NA other upstream 2245678 31234364 ~ 31234723 (+)
LOC120547658 NA other upstream 3278581 30153511 ~ 30201820 (+)
si:ch211-51a6.2 LOC104924867,LOC103357113,LOC100694100 other downstream 474029 33981511 ~ 34008003 (+)
LOC120548523 NA other downstream 1387701 34895183 ~ 34948460 (+)

Expression


Co-expression Network