LOC120547808


Basic Information

Item Value
gene id LOC120547808
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 29557263 ~ 29558335 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039783503.1
CAGGGCTTTACTAAGCCTGGTCCTAACTGCTAAGTAGGTCTTAGTTAAGACCAGTCTTAAGAGTTGACCTAACGTCTGTTGCACCAACCAAACTTAAGCCTAGGCTTAACTACGCCTGGTCTTAGCGTTGCGCGTCCATGTGTTGTTGACCAGCAGcgtacgttgctaggttacgcTGTAACGTTGCTAGGTTACGCTGTAAACTATCTTCCGCTGTTTTGTTAACTTGTAACGTTAGCCGTATCAATGGAGgagcaaagaaaaagaaaagaaaatttcaCCGACATTGAGATACGAAAGTTAATAGAGCTGTACAGTCAGCACAGACTCACACTGACTGCCAAGCAATCAAATACAataacaaacaagaaaaaacaaacaacatggaGACAGATAACAGAGGCGATTAACGATTGCTCTGACTCCGGCTGCCTTCGGACAGAAAGCGATGTAAGAAAGAAGTGGAAAGACCTCCTGAGCAAAGCAAAAAAAGATTTGTCTGCAAAAAAACACCACCCGACCGGCGGGGGTCCTCCCCCAAAATCTTCCGTGTACAGTACCATCATTGTGGATATCTTTGGAGAGGATTCCCCGGCTTTTATTGGTTTGGTCGGTGCGGAAAGTGGCGGTACCGACATGGAAGAAACTGCTGTCTCTCCAGAGATGGATGTCGATCACTCAAGCGAGAGTGTGATTTGTgaagACTCGATGGAGGACCCAGTCACTCCACAAAGTTCTCACGAACACAGCAGCGGTGCACCGCCGGTGAAACGGATGAGGAGGCTGGATAATCTTCAGCAGACACTTCTTGAGAAAGAAATTGTTAGAGTGGAGactgaaacaaaaaaattacagaccGAGCAGGAAAAGTTGGAActtgaaaaacaaaagataTTGTTAGAAATACAGTTGCTCCAACAACAGATAAACAGGTCATCTTCGCCTATTTCTGAAGAGGATGGGCGGTCTTTTGTAATTCTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039783503.1 True 984 mRNA 0.45 2 29557263 29558335

Neighbor

gene id symbol gene type direction distance location
LOC120547961 LOC103372209,LOC104933668 coding upstream 703040 28817833 ~ 28854223 (+)
si:dkey-187a12.4 LOC104933667,LOC104950525 coding upstream 755887 28790784 ~ 28801376 (+)
LOC120548038 tuba1c,LOC108255233,LOC103148207,LOC108247626,LOC106920718,LOC101079871,LOC101066234 coding upstream 767358 28787046 ~ 28789905 (+)
LOC120547521 nanp coding upstream 787184 28764397 ~ 28770079 (+)
LOC120547955 rmdn2 coding upstream 871195 28635328 ~ 28686068 (+)
LOC120547721 LOC103357097 coding downstream 70396 29628731 ~ 29632761 (+)
LOC120548236 LOC103357099,LOC103387711 coding downstream 88388 29646723 ~ 29655051 (+)
pcca pcca coding downstream 101077 29659412 ~ 29698143 (+)
cdt1 NA coding downstream 398385 29956720 ~ 29963090 (+)
nvl NA coding downstream 709453 30267788 ~ 30336160 (+)
G197571 NA non-coding upstream 86307 29470012 ~ 29470956 (+)
G197568 NA non-coding upstream 98827 29457418 ~ 29458436 (+)
G197532 NA non-coding upstream 147276 29351706 ~ 29409987 (+)
G197530 NA non-coding upstream 174657 29332515 ~ 29382606 (+)
G197537 NA non-coding upstream 191777 29360009 ~ 29365486 (+)
G197635 NA non-coding downstream 145752 29704087 ~ 29705013 (+)
G197636 NA non-coding downstream 150408 29708743 ~ 29710005 (+)
G197654 NA non-coding downstream 210141 29768476 ~ 29779051 (+)
G197679 NA non-coding downstream 411455 29969790 ~ 29977939 (+)
G197686 NA non-coding downstream 436246 29994581 ~ 30000931 (+)
G197531 NA other upstream 207335 29348425 ~ 29349928 (+)
LOC120548242 ccdc85a,LOC104955469,LOC102783086,LOC102310250,LOC102209339,LOC100696856 other upstream 379769 29112688 ~ 29177494 (+)
ccnj ccnj,LOC102785723 other upstream 1254930 28294205 ~ 28302333 (+)
LOC120548047 adgra1,LOC103360772 other upstream 1776222 27554928 ~ 27781041 (+)
LOC120548261 LOC102312438,LOC102207415,LOC101470427 other upstream 2045671 27451950 ~ 27511592 (+)
LOC120547658 NA other downstream 595176 30153511 ~ 30201820 (+)
G197999 NA other downstream 1676029 31234364 ~ 31234723 (+)
G198185 NA other downstream 3234953 32793288 ~ 32794661 (+)
G198245 rab1a,LOC104962072,LOC102231865 other downstream 3404053 32962388 ~ 32965074 (+)
slc2a15a LOC103367959,LOC104935160,LOC103476520,LOC106961144,LOC103155793 other downstream 3599394 33157729 ~ 33199862 (+)

Expression


Co-expression Network