nvl


Basic Information

Item Value
gene id nvl
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 30267788 ~ 30336160 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039783506.1
aagaagaagaagaagaagaagaagacaggaTGCACACATGTTCATTTCCCGGGGTCAGCATTGTCTTCACGCCGTACTTACCCATACCTCTCGCTGCCAGACCGTAAACACAGGTTACCATCAGTTTAACTGAAGAATTTGCGATGTGGTGGTGTTTTTGTTAAGGCTCACATAAAAACCAACATGAAGAACAGAAGTGGTGGCTGTCTGGACAGTCGTCTCAGACAGAGAGTGGAGCAGTATTTGGCGACATGCACCAGTGAATATGTGGACCTTTCAGCCATGGCCCTGGAACTTCAAAAACTGTACAGAATGGAGTATGGCAGAAGAAACAGGACAGCCTTCAGGATTCAAGTAGAGAAAGTGTACGAAGCAATCATGAAGGAGTCTGGGCTGAATGATCTGGAGAGCAAACACTTGGCTAAGAGAGCCAAGCACAGCCACAATGACACCGGGGatggcagcagcagctcagaggaGTCCTCTGACAGTGATGACCCCATTCTGGAGAACACTCCCACCAACCACATGAACAGCTCTCTGACATCCTTGTACCGGAAAGGCCACCCTGAGTCTGGCACTTGCTCACCCAGGAGAGATCAGCCTGCTGCCAGCAGTCCTGCCAGCACAGCCAACCTCCCTCCCAGTGCAGGGACGCTGGTCTCCACAGGAGGGTGGTTCATCGACCGAGGCAGAGGCCCCGAGAAGAGCAGCATCCTCATCGACCTGTGTGAAGAGGAGCCAACGAATACAATGTCCAATAAAACGGATGTGTCCATGCTACAACCTGAGAAATCTGCcaaaaagtccaaaaaaaggaggaagacCTCCACTGAAACTACGGAGTCTCGCAGCCTGAATAAGAAAGCAAAGTCAAAGTCACCAGAGCTGCAGTATCCTACTTTGAAGTTTGAAGATGTAGGAGGTAATGAAGAGACTCTAACGGAGGTGTGTAAGCTGCTGATCCACATGCGTCACCCAGAGGTGTACCAGCAGCTGGGAATGGTTCCTCCGAGGGGCTTCCTGCTCCACGGACCTCCTGGCTGTGGAAAGACCCTGCTGGCCCAGGCTGTGGCTGGGGAGATGCAGCTGCCCATGTTGAAGGTGTCTGCTCCGGAGCTGGTGTCTGGAGTTTCTGGGGAGTCTGAACAGAAGCTCCGAGAGCTGTTTGACCTGGCTGTGGTTAACTTGAACAGTCTAACAGAGACGGCTCAGGTCCTGGTCATCGGCGCCACCAACAGGCCAGACTCCCTGGACCCGGCCCTCCGCCGAGCCGGGCGCTTCGACAGAGAGATCTGCCTGGGTATCCCTGATGAAGCAGCTCGTCTCAGGATCTTGAAGACACTGTGTCGAAAGCTGAAGCTGCCGGAGGACTTTGACTACCAGCAGCTGGCCCGGCTCACCCCCGGCTACGTGGGCGCAGACCTCATGGCTCTGTGCCGCGAAGCTGCCATGAGTGCTGTCCACAGGGTTCTGCTGGAGATAAGAGGACAAAGCTGGAGCGCCACTGAAGAGCTGTTAACACGCAGAGATCTGGCTGAGGCTGCTGTGAGCGACGGAGAGGTCAGAGAACAACAGACCAACGACACTGAGCCAGTACCTGAGGAAGAGTCAGCACAGGATCCCCTGCAGcagggggagctcTGGCACCTGCTGCATTTGCTGAAAAGCACTGAGACACTGTCGGAGGAAGAGCTGGCCGGCCTGTGCATCCTTATGTCAGACTTCAAGGCCTCTCTGGCCAGTATCCAGCCTTCAGCCAAGAGGGAGGGCTTCGCCACCGTGCCCGATGTCACCTGGGAGGATGTGGGAGCCCTGCAGGACATCAGAGAGGAGCTCACCATGGCCATACTGGCCCCGGTGCGGTCTCCAGAGCAGTTCAGAGCTCTGGGGCTCAGTGCTCCATCTGGTGTGCTGCTGGCTGGACCTCCAGGATGTGGAAAAACACTGCTGGCCAAGGCAGTGGCCAATGAGTCAGGCCTCAACTTCATCTCTGTCAAGGGTCCAGAGCTGCTCAACATGTATGTGGGAGAGAGTGAGCGCGCCGTCAGACAGGTCTTTCAGAGAGGACGTAACTCGGCTCCTTGTGTCATATTCTTTGATGAGATCGATGCTCTGTGTCCTCGGCGCTCAGGCCATGAGtcaggAGCCAGTGTGCGGGTGGTCAACCAGCTGCTCACAGAGATGGACGGCTTAGAGACTCGACGGCAGGTCTTCATCATGGCTGCAACCAACAGACCAGATATCATCGACCCTGCCATCCTGAGGCCAGGTCGTCTAGATAAAACCTTGTATGTGGGTCTGCCACCTCCTGCAGACCGCCATGCCATCCTGCTCACCATTACTAAGGGAGGGACCAAACCTCAGCTGGAGGACGATGTCTGCCTTGAAGAGGTCGCTTTCGACGAGCGCTGTGATTGCTTCAGTGGTGCTGACATCACTGCTTTAGTGAGGGAAGCATCTGTTAATGCCCTGAGGATCTACCTGAAGTCCCAGCCTTCTCCAGCTTCTTCCTCTGGTCACACATATTCCTCTGGCTCTGTCGCTGACATCAGAGTGAGCAAACAGAACTTTGATGATGCCTTCAAGAAAGTTCGACCATCTGTGtccaaaaagGACCAGAGGATGTACGAGCAGCTGAGAGAGTCCCTCAGCAGATAACTACGAGACCAGAGCCTCAGACGACTTCAGTTATTATGGAATAATTGTgtcctctatatatatatatatatatatatatatata

Function

NR:

description
nuclear valosin-containing protein-like isoform X1

GO: NA

KEGG:

id description
K14571 RIX7, NVL; ribosome biogenesis ATPase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039783506.1 True 2745 mRNA 0.54 23 30267788 30336160

Neighbor

gene id symbol gene type direction distance location
cdt1 NA coding upstream 304698 29956720 ~ 29963090 (+)
pcca pcca coding upstream 569645 29659412 ~ 29698143 (+)
LOC120548236 LOC103357099,LOC103387711 coding upstream 612737 29646723 ~ 29655051 (+)
LOC120547721 LOC103357097 coding upstream 635027 29628731 ~ 29632761 (+)
LOC120547808 NA coding upstream 709453 29557263 ~ 29558335 (+)
sertad2b sertad2,LOC104932742 coding downstream 169894 30506054 ~ 30600609 (+)
slc1a4 slc1a4,LOC102791775 coding downstream 289470 30625630 ~ 30671184 (+)
LOC120548109 LOC102195401,LOC103353517,LOC102300597,LOC106939791 coding downstream 375413 30711573 ~ 31005023 (+)
ogfrl1 ogfrl1,LOC104917660,LOC103363704,LOC100701482 coding downstream 847160 31183320 ~ 31198691 (+)
LOC120547952 rims1,LOC102777706,LOC102298248 coding downstream 1006799 31342959 ~ 31493220 (+)
G197761 NA non-coding upstream 97877 30169444 ~ 30169911 (+)
LOC120547657 NA non-coding upstream 117072 30146823 ~ 30150716 (+)
G197739 NA non-coding upstream 137565 30129885 ~ 30130223 (+)
G197695 NA non-coding upstream 201259 30064770 ~ 30066529 (+)
G197686 NA non-coding upstream 266857 29994581 ~ 30000931 (+)
G197803 NA non-coding downstream 2616 30338776 ~ 30339212 (+)
G197804 NA non-coding downstream 5177 30341337 ~ 30344038 (+)
G197843 NA non-coding downstream 60907 30397067 ~ 30397289 (+)
G197845 NA non-coding downstream 75748 30411908 ~ 30412212 (+)
G197847 NA non-coding downstream 76757 30412917 ~ 30413144 (+)
LOC120547658 NA other upstream 65968 30153511 ~ 30201820 (+)
LOC120547718 LOC102789565,LOC100690068,LOC101471749,LOC103357097 other upstream 648772 29518941 ~ 29619016 (+)
G197531 NA other upstream 917860 29348425 ~ 29349928 (+)
LOC120548242 ccdc85a,LOC104955469,LOC102783086,LOC102310250,LOC102209339,LOC100696856 other upstream 1090294 29112688 ~ 29177494 (+)
ccnj ccnj,LOC102785723 other upstream 1965455 28294205 ~ 28302333 (+)
G197999 NA other downstream 898204 31234364 ~ 31234723 (+)
G198185 NA other downstream 2457128 32793288 ~ 32794661 (+)
G198245 rab1a,LOC104962072,LOC102231865 other downstream 2626228 32962388 ~ 32965074 (+)
slc2a15a LOC103367959,LOC104935160,LOC103476520,LOC106961144,LOC103155793 other downstream 2821569 33157729 ~ 33199862 (+)
si:ch211-51a6.2 LOC104924867,LOC103357113,LOC100694100 other downstream 3645351 33981511 ~ 34008003 (+)

Expression


Co-expression Network