LOC120547882 (inpp5a)


Basic Information

Item Value
gene id LOC120547882
gene name inpp5a
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 26926418 ~ 27109140 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039783659.1
AGCCTATCCTCTCTAAACAGTGAAAGCAATGGTCCTGGCACAGAGTCCTGCTTTGCTTTCGGAGGGAGACTTTTACACTGCACAAAAGCTAGGGAAACACTCTTCGCTGAAATGAACCAGAGCCCTCGGGCACTCGCCGTGGATTAAACGGAAACTTTTACGATGGCTTTGAACGGGAAAAAGTAGCACGAGAGACAGAGCACGCTAACCGCCGCCGCCGACGGACCTTCTACTGCAAAGCAACTCCTTGTAGATGCACGGCCACTGCTGAAAAATATGCTCCAGCCGAGCCGCCTCAACCCCGGCTTCAGTGGCAAATTACCAGTGTTATAACCAGTTTCGTGAGACATTCGCCGGCATctatttgttttggttttttcccCCCCGCTCCTTACCTATAAAGTCCGCAGTACAAGTCCTCGACCCACCTGCGAAAAGAGAATTATGGCAGGGAAGCTGACAGCAGCGCAAGGCACAGGAATACTGCTGGTGACAGCCAACGTTGGATCTCTGTTCGAGGATCCTGACAATCTACAGAAAACATGGCTGAGGGAGTTTTACCAGACCGTACAGACACACAAGCCTCACTTCTTGGCAGTGCACTGCCAGGAGGTGGGTGGGAAGAATTATGAGGCATCAATGTCACACGTGGATAGTTTTGTCAAAGAGCTGCTGTCCAGTGATGCCATGAAGGAGTACAACAGAGCCCGCGTCTACCTCGATGAGAACTACAAATCCCAGGAGCATTTCACAGCTCTCGGAAGTTTCTACTTTATCCACGACTCTTTGAAAAACGTCCACCAGTTTGATTTCAAAGCCAAGAAATTCAAGAAGGTTGTAGGGAAGGAAACCTACTCAGAGACACTAGAAGGCACGCCCTCGCTGGAGAAGGAGAAGTTTCCACAGGACTACTTTCCTGAGTGCAAGTGGTCCAGAAAGGGATTCATCAGAACTCGATGGGCCCTGGCTGACTGCGCATTTGATCTGGTCAACATCCACCTTTTCCATGATGCCTCCAACTTGGTAGCCTGGGAGAAAAGCCCCTCCGTCTACTCTGGGACCAGGCAGAAGGCGCTGGGCTACGTCTTAGACAGGATCACGGACCAGCGGCATGAGAAGTTGCCGTATTTTGTCTTTGGGGACTTTAACTTCAGGTTGGACTCGAAGCAGGTCATTGAGagTCTCTGCTCCACTGCCACCCTGCAGACAGTCAGAGCCGCCGACACCAATGAAGTCGACAAGCTAATATTCCGAGAAAGTGACAACGACCGAAAGGTTGTTCTTCAACTTGAAAAGAAGCTTTTTAATTATGTCAACCAGGACGTTTTCCGGGAAAACAATGGGACCTCACTTTTAGAGTATGACAAAGAGCTGTCGGTGTTCAAGGATCGGCTGCATGAACTGGAGATCTCCTTCCCACCCAGTTATCCGTACAGTGAAGACAGCAGTCAGGGGAAGCAGTACATGAACACCAGATGCCCTGCCTGGTGTGACCGAATCCTCTTGTCTCCCTCTGCCAGAGACCTGGCCTTAAAGcCTGAAAATGAAGAGAAGTCTATAGTGTATGATAACATCGGGCCCAATGTCTGCATGGGGGACCACAAGCCCGTCTTCCTGTCCTTCCGAATAACAGCGGGGGCAGGGAAGTGTTGCCAAAGGGGGGAGAAGATATTCCGCGAAGCGCCTCTGTGAGAACACTGGAGAAACAAACcggacaccaacacacacacacacacacacacacacacacacacacacacacatttgcatgcaaacaaacacaaatagacacacacacactttgcacaAGCGTACACTGAAGAACCTAGACCAAGTTTTTCGGCAGTGCTGACCGGTTGCGGTTGTCCTGACACCAACATCCATATGAGCACCCAGCCGTTTTCTCTCCATAAAACACTTGTTGAGATGTGGACGGGCACCCGAGGGCCCGGGCTCCAGACAAGACACACATCGCTGACCTCACTGTTGCCATGCAACCCCATTCcccagagaagaaagaaaaagaaagaaaggaaaaaaagaagaagaagaaaaggaacGGACGGacgactcttttttttttttctccatgccACAGCCTCGTTGCCAAAACTCTAATTGAAATCAGTCCTACTACATACTTTTAGACACCGTACTTGCCATTTTTAGGTATGCCTCTATGTATAGAAGCTACTTTCCACACAGTATCTAAGGtgttttaagaaaagaaaagtgcaatgcaaaaaaaaaaaaaaaaagttgtatatcTTATATTGTTAGGTTTATTTGTACATTGGACAGTATAAGATAAGAGTTGTTCATGGTTTTTAGTGCCGTTCTCTTTTCTGACCAAACTTTGTGGTCCCTTCATGGAATAGATAAGACacttttctgtttattttaacaatttatatataaatatatacatttctttttgtttctgtttttgtttttttttgagttGTTGTGTGCACAACACACTGCTATGCCTGACACATCCATTGAGTCTCATTTTATATACTGTTCTTTTTAAAGAGATAATTTATAATTCTTACCAAAATGTTTATGCTGAAAGTGCGACTGTCTGGGAGTTCCTGCAGCCACGGTGGAACCTCGGAGGAGTCGGTGGGAGAGGAGCCAATCAGAAAAGAAAAACCAACTGTTGTGTGATTTATTGCCTGTCCAGGATTGTTTAAGCAGTGCCATAGACCATGCAAGTATATAAGATAATGTTTCCTATATAGCACTCTCACATTGTTATTCTTACTCTAACTTATTTCTATAATATTATGGTTCTGAATGTGATATTTTTTAGATAGGCTTGGGTATCTTAAAAtgtaaacttttattttatttttttcctgtgtCAGTTTTTGTTACTGCATTACGGTGCCAAGTATcctacacagaaaaaaagtgtgtaAGAGTTATAAAATACTTAAGTCAGATGGTAAAGGTATTGAttgtgtaatgtaaaaaaaaaaaaaaaaaaaagaaatggggaGAAACTCTAAACGCAGAGCAGgaagacttgtgtgtgtgtagccttcATTGCAAATAATTAGAGCATTAAAGAGGCGATAAGAGcggttcttttttttgtatcgATTTCGTTTACTAGGCCTACACTACAGAGTTCAGACTGTGTGAAGCCGTCACATTGATCCTTACGggaattcttttttctttttcttttcttttttaaatctaagTCACAATCGCAAATGGAAATGATTTTGTGCCTGCTGCAGAATTCATGTTGTCTTGTGTGATTTGgggtttgttttctgttttcttgttgtaaaaaaaaaaaaagcctgcttGTTTTTGTTCCTGCTGGTCATTGTGAGTATACTGTAGGAATATAAGCcgcaattattattttttttcttcactccatcttataaaaaaaaaaaagcagataaGAGATTTTATTCTAGCCCCTTCCGGCCTGGGCCTCTACTGTAGGTGATGCACTTCTCAAGCAATAAAAAACCCATTAGAGCTCAA
>XM_039783660.1
AGCCTATCCTCTCTAAACAGTGAAAGCAATGGTCCTGGCACAGAGTCCTGCTTTGCTTTCGGAGGGAGACTTTTACACTGCACAAAAGCTAGGGAAACACTCTTCGCTGAAATGAACCAGAGCCCTCGGGCACTCGCCGTGGATTAAACGGAAACTTTTACGATGGCTTTGAACGGGAAAAAGTAGCACGAGAGACAGAGCACGCTAACCGCCGCCGCCGACGGACCTTCTACTGCAAAGCAACTCCTTGTAGATGCACGGCCACTGCTGAAAAATATGCTCCAGCCGAGCCGCCTCAACCCCGGCTTCAGTGGCAAATTACCAGTGTTATAACCAGTTTCGTGAGACATTCGCCGGCATctatttgttttggttttttcccCCCCGCTCCTTACCTATAAAGTCCGCAGTACAAGTCCTCGACCCACCTGCGAAAAGAGAATTATGGCAGGGAAGCTGACAGCAGCGCAAGGCACAGGAATACTGCTGGTGACAGCCAACGTTGGATCTCTGTTCGAGGATCCTGACAATCTACAGAAAACATGGCTGAGGGAGTTTTACCAGACCGTACAGACACACAAGCCTCACTTCTTGGCAGTGCACTGCCAGGAGGTGGGTGGGAAGAATTATGAGGCATCAATGTCACACGTGGATAGTTTTGTCAAAGAGCTGCTGTCCAGTGATGCCATGAAGGAGTACAACAGAGCCCGCGTCTACCTCGATGAGAACTACAAATCCCAGGAGCATTTCACAGCTCTCGGAAGTTTCTACTTTATCCACGACTCTTTGAAAAACGTCCACCAGTTTGATTTCAAAGCCAAGAAATTCAAGAAGGTTGTAGGGAAGGAAACCTACTCAGAGACACTAGAAGGCACGCCCTCGCTGGAGAAGGAGAAGTTTCCACAGGACTACTTTCCTGAGTGCAAGTGGTCCAGAAAGGGATTCATCAGAACTCGATGGGCCCTGGCTGACTGCGCATTTGATCTGGTCAACATCCACCTTTTCCATGATGCCTCCAACTTGGTAGCCTGGGAGAAAAGCCCCTCCGTCTACTCTGGGACCAGGCAGAAGGCGCTGGGCTACGTCTTAGACAGGATCACGGACCAGCGGCATGAGAAGTTGCCGTATTTTGTCTTTGGGGACTTTAACTTCAGGTTGGACTCGAAGCAGGTCATTGAGagTCTCTGCTCCACTGCCACCCTGCAGACAGTCAGAGCCGCCGACACCAATGAAGTCGACAAGCTAATATTCCGAGAAAGTGACAACGACCGAAAGGTTGTTCTTCAACTTGAAAAGAAGCTTTTTAATTATGTCAACCAGGACGTTTTCCGGGAAAACAATGGGACCTCACTTTTAGAGTATGACAAAGAGCTGTCGGTGTTCAAGGATCGGCTGCATGAACTGGAGATCTCCTTCCCACCCAGTTATCCGTACAGTGAAGACAGCAGTCAGGGGAAGCAGTACATGAACACCAGATGCCCTGCCTGGTGTGACCGAATCCTCTTGTCTCCCTCTGCCAGAGACCTGGCCTTAAAGcCTGAAAATGAAGAGAAGTCTATAGTGTATGATAACATCGGGCCCAATGTCTGCATGGGGGACCACAAGCCCGTCTTCCTGTCCTTCCGAATAACAGCGGGGGCAGGTAAACCTAATGCAAATAAGCACAAGTGTTGTGTGGTGCAGTGATGTCGTGGGAAGTGTTGCCAAAGGGGGGAGAAGATATTCCGCGAAGCGCCTCTGTGAGAACACTGGAGAAACAAACcggacaccaacacacacacacacacacacacacacacacacacacacacacatttgcatgcaaacaaacacaaatagacacacacacactttgcacaAGCGTACACTGAAGAACCTAGACCAAGTTTTTCGGCAGTGCTGACCGGTTGCGGTTGTCCTGACACCAACATCCATATGAGCACCCAGCCGTTTTCTCTCCATAAAACACTTGTTGAGATGTGGACGGGCACCCGAGGGCCCGGGCTCCAGACAAGACACACATCGCTGACCTCACTGTTGCCATGCAACCCCATTCcccagagaagaaagaaaaagaaagaaaggaaaaaaagaagaagaagaaaaggaacGGACGGacgactcttttttttttttctccatgccACAGCCTCGTTGCCAAAACTCTAATTGAAATCAGTCCTACTACATACTTTTAGACACCGTACTTGCCATTTTTAGGTATGCCTCTATGTATAGAAGCTACTTTCCACACAGTATCTAAGGtgttttaagaaaagaaaagtgcaatgcaaaaaaaaaaaaaaaaagttgtatatcTTATATTGTTAGGTTTATTTGTACATTGGACAGTATAAGATAAGAGTTGTTCATGGTTTTTAGTGCCGTTCTCTTTTCTGACCAAACTTTGTGGTCCCTTCATGGAATAGATAAGACacttttctgtttattttaacaatttatatataaatatatacatttctttttgtttctgtttttgtttttttttgagttGTTGTGTGCACAACACACTGCTATGCCTGACACATCCATTGAGTCTCATTTTATATACTGTTCTTTTTAAAGAGATAATTTATAATTCTTACCAAAATGTTTATGCTGAAAGTGCGACTGTCTGGGAGTTCCTGCAGCCACGGTGGAACCTCGGAGGAGTCGGTGGGAGAGGAGCCAATCAGAAAAGAAAAACCAACTGTTGTGTGATTTATTGCCTGTCCAGGATTGTTTAAGCAGTGCCATAGACCATGCAAGTATATAAGATAATGTTTCCTATATAGCACTCTCACATTGTTATTCTTACTCTAACTTATTTCTATAATATTATGGTTCTGAATGTGATATTTTTTAGATAGGCTTGGGTATCTTAAAAtgtaaacttttattttatttttttcctgtgtCAGTTTTTGTTACTGCATTACGGTGCCAAGTATcctacacagaaaaaaagtgtgtaAGAGTTATAAAATACTTAAGTCAGATGGTAAAGGTATTGAttgtgtaatgtaaaaaaaaaaaaaaaaaaaagaaatggggaGAAACTCTAAACGCAGAGCAGgaagacttgtgtgtgtgtagccttcATTGCAAATAATTAGAGCATTAAAGAGGCGATAAGAGcggttcttttttttgtatcgATTTCGTTTACTAGGCCTACACTACAGAGTTCAGACTGTGTGAAGCCGTCACATTGATCCTTACGggaattcttttttctttttcttttcttttttaaatctaagTCACAATCGCAAATGGAAATGATTTTGTGCCTGCTGCAGAATTCATGTTGTCTTGTGTGATTTGgggtttgttttctgttttcttgttgtaaaaaaaaaaaaagcctgcttGTTTTTGTTCCTGCTGGTCATTGTGAGTATACTGTAGGAATATAAGCcgcaattattattttttttcttcactccatcttataaaaaaaaaaaagcagataaGAGATTTTATTCTAGCCCCTTCCGGCCTGGGCCTCTACTGTAGGTGATGCACTTCTCAAGCAATAAAAAACCCATTAGAGCTCAA
>XR_005637113.1
AGCCTATCCTCTCTAAACAGTGAAAGCAATGGTCCTGGCACAGAGTCCTGCTTTGCTTTCGGAGGGAGACTTTTACACTGCACAAAAGCTAGGGAAACACTCTTCGCTGAAATGAACCAGAGCCCTCGGGCACTCGCCGTGGATTAAACGGAAACTTTTACGATGGCTTTGAACGGGAAAAAGTAGCACGAGAGACAGAGCACGCTAACCGCCGCCGCCGACGGACCTTCTACTGCAAAGCAACTCCTTGTAGATGCACGGCCACTGCTGAAAAATATGCTCCAGCCGAGCCGCCTCAACCCCGGCTTCAGTGGCAAATTACCAGTGTTATAACCAGTTTCGTGAGACATTCGCCGGCATctatttgttttggttttttcccCCCCGCTCCTTACCTATAAAGTCCGCAGTACAAGTCCTCGACCCACCTGCGAAAAGAGAATTATGGCAGGGAAGCTGACAGCAGCGCAAGGCACAGGAATACTGCTGGTGACAGCCAACGTTGGATCTCTGTTCGAGGATCCTGACAATCTACAGAAAACATGGCTGAGGGAGTTTTACCAGACCGTACAGACACACAAGCCTCACTTCTTGGCAGTGCACTGCCAGGAGGTGGGTGGGAAGAATTATGAGGCATCAATGTCACACGTGGATAGTTTTGTCAAAGAGCTGCTGTCCAGTGATGCCATGAAGGAGTACAACAGAGCCCGCGTCTACCTCGATGAGAACTACAAATCCCAGGAGCATTTCACAGCTCTCGGAAGTTTCTACTTTATCCACGACTCTTTGAAAAACGTCCACCAGTTTGATTTCAAAGCCAAGAAATTCAAGAAGGTTGTAGGGAAGGAAACCTACTCAGAGACACTAGAAGGCACGCCCTCGCTGGAGAAGGAGAAGTTTCCACAGGACTACTTTCCTGAGTGCAAGTGGTCCAGAAAGGGATTCATCAGAACTCGATGGGCCCTGGCTGACTGCGCATTTGATCTGGTCAACATCCACCTTTTCCATGATGCCTCCAACTTGGTAGCCTGGGAGAAAAGCCCCTCCGTCTACTCTGGGACCAGGCAGAAGGCGCTGGGCTACGTCTTAGACAGGATCACGGACCAGCGGCATGAGAAGTTGCCGTATTTTGTCTTTGGGGACTTTAACTTCAGGTTGGACTCGAAGCAGGTCATTGAGagTCTCTGCTCCACTGCCACCCTGCAGACAGTCAGAGCCGCCGACACCAATGAAGTCGACAAGCTAATATTCCGAGAAAGTGACAACGACCGAAAGGTTGTTCTTCAACTTGAAAAGAAGCTTTTTAATTATGTCAACCAGGACGTTTTCCGGGAAAACAATGGGACCTCACTTTTAGAGTATGACAAAGAGCTGTCGGTGTTCAAGGATCGGCTGCATGAACTGGAGATCTCCTTCCCACCCAGTTATCCGTACAGTGAAGACAGCAGTCAGGGGAAGCAGTACATGAACACCAGATGCCCTGCCTGGTGTGACCGAATCCTCTTGTCTCCCTCTGCCAGAGACCTGGCCTTAAAGcCTGAAAATGAAGAGAAGTCTATAGTGTATGATAACATCGGGCCCAATGTCTGCATGGGGGACCACAAGCCCGTCTTCCTGTCCTTCCGAATAACAGCGGGGGCAGGGAAGTGTTGCCAAAGGGGGGAGAAGATATTCCGCGAAGCGCCTCTGTGAGAACACTGGAGAAACAAACcggacaccaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca

Function

symbol description
inpp5a Enables PH domain binding activity and inositol-polyphosphate 5-phosphatase activity. Acts upstream of or within inositol phosphate dephosphorylation. Located in plasma membrane.

NR:

description
PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase isoform X2

GO:

id name namespace
GO:0046856 phosphatidylinositol dephosphorylation biological_process

KEGG:

id description
K01106 INPP5A; inositol polyphosphate 5-phosphatase INPP5A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039783659.1 False 3510 mRNA 0.44 16 26926418 27099723
XM_039783660.1 True 3561 mRNA 0.44 16 26926418 27099723
XR_005637113.1 False 1795 transcript 0.51 17 26926418 27109140

Neighbor

gene id symbol gene type direction distance location
LOC120547537 NA coding upstream 52750 26865625 ~ 26873668 (+)
LOC120547700 plac9 coding upstream 159080 26758333 ~ 26767338 (+)
mcfd2 mcfd2 coding upstream 303848 26619417 ~ 26622570 (+)
calm2a calm1,LOC102778633,LOC102293206,LOC107396020 coding upstream 394692 26527783 ~ 26531726 (+)
si:ch73-105b23.6 LOC104955877 coding upstream 404841 26495508 ~ 26521577 (+)
valopa valop,LOC104938804,LOC106940109,LOC107093123 coding downstream 67828 27176968 ~ 27206666 (+)
LOC120548504 kndc1 coding downstream 699164 27808304 ~ 27878568 (+)
vox NA coding downstream 777103 27886243 ~ 27887609 (+)
vent NA coding downstream 782310 27891450 ~ 27900204 (+)
blnk NA coding downstream 1122655 28231795 ~ 28275999 (+)
G197069 LOC103370964,LOC104925911,LOC102295618,LOC103148144 non-coding upstream 180333 26740257 ~ 26746085 (+)
G197035 LOC104925924,LOC104948680,LOC103376065 non-coding upstream 298716 26624635 ~ 26627702 (+)
G197029 NA non-coding upstream 386283 26539844 ~ 26540135 (+)
G197027 NA non-coding upstream 393184 26533032 ~ 26533234 (+)
G196967 NA non-coding upstream 615132 26291118 ~ 26311286 (+)
G197087 NA non-coding downstream 6826 27115966 ~ 27116514 (+)
G197089 NA non-coding downstream 33431 27142571 ~ 27142786 (+)
G197137 NA non-coding downstream 156139 27265279 ~ 27265508 (+)
G197143 NA non-coding downstream 190028 27299168 ~ 27299994 (+)
G197146 NA non-coding downstream 190970 27300110 ~ 27301368 (+)
tmem254 NA other upstream 190631 26725716 ~ 26735787 (+)
G197053 NA other upstream 262633 26663159 ~ 26663785 (+)
stpg4 LOC103353520,LOC101467386,LOC102793681,LOC102299197 other upstream 377658 26535284 ~ 26548760 (+)
LOC120548053 LOC103353497,LOC102790632,LOC102299158,LOC102194143,LOC101482614,LOC100706574 other upstream 1099989 25817251 ~ 25826429 (+)
prdx3 prdx3 other upstream 1305743 25613407 ~ 25620675 (+)
LOC120548261 LOC102312438,LOC102207415,LOC101470427 other downstream 342810 27451950 ~ 27511592 (+)
LOC120548047 adgra1,LOC103360772 other downstream 445788 27554928 ~ 27781041 (+)
ccnj ccnj,LOC102785723 other downstream 1185065 28294205 ~ 28302333 (+)
LOC120548242 ccdc85a,LOC104955469,LOC102783086,LOC102310250,LOC102209339,LOC100696856 other downstream 2003548 29112688 ~ 29177494 (+)
G197531 NA other downstream 2239285 29348425 ~ 29349928 (+)

Expression


Co-expression Network