Gene
RNA
| Item | Value |
|---|---|
| gene id | gpatch11 |
| gene name | gpatch11,LOC102790129,LOC102788696 |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053130.1 |
| NCBI id | CM020927.1 |
| chromosome length | 36824488 |
| location | 23080979 ~ 23083906 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| gpatch11 | Predicted to enable nucleic acid binding activity. Predicted to be located in chromosome, centromeric region. Predicted to be active in kinetochore. Orthologous to human GPATCH11 (G-patch domain containing 11). |
| description |
|---|
| G patch domain-containing protein 11 |
| id | name | namespace |
|---|---|---|
| GO:0003676 | nucleic acid binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039783760.1 | True | 1310 | mRNA | 0.42 | 9 | 23080979 | 23083906 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| vit | vit | coding | upstream | 48847 | 23011389 ~ 23032132 (+) |
| LOC120547567 | LOC104953149,LOC103387627,LOC103374175 | coding | upstream | 71760 | 23002004 ~ 23009219 (+) |
| spast | spast,LOC103374668 | coding | upstream | 98376 | 22978152 ~ 22982603 (+) |
| mkks | mkks | coding | upstream | 117025 | 22959309 ~ 22963954 (+) |
| jag1b | jag1,LOC102209890 | coding | upstream | 160667 | 22894831 ~ 22920312 (+) |
| LOC120547580 | NA | coding | downstream | 1026 | 23084932 ~ 23094240 (+) |
| LOC120547579 | NA | coding | downstream | 16009 | 23099915 ~ 23110571 (+) |
| LOC120547578 | NA | coding | downstream | 28753 | 23112659 ~ 23126098 (+) |
| LOC120547586 | ggps1,LOC102790345 | coding | downstream | 219298 | 23303204 ~ 23319036 (+) |
| LOC120547587 | ggps1,LOC102790345 | coding | downstream | 253475 | 23337381 ~ 23351721 (+) |
| G196028 | NA | non-coding | upstream | 46188 | 23032452 ~ 23034791 (+) |
| G196017 | NA | non-coding | upstream | 90277 | 22990433 ~ 22990702 (+) |
| G196016 | NA | non-coding | upstream | 91089 | 22989684 ~ 22989890 (+) |
| G195973 | NA | non-coding | upstream | 116849 | 22963967 ~ 22964130 (+) |
| G195968 | NA | non-coding | upstream | 156317 | 22922776 ~ 22924662 (+) |
| G196036 | NA | non-coding | downstream | 52540 | 23136446 ~ 23144652 (+) |
| G196057 | NA | non-coding | downstream | 62906 | 23146812 ~ 23147635 (+) |
| G196111 | NA | non-coding | downstream | 105694 | 23189600 ~ 23190156 (+) |
| G196124 | NA | non-coding | downstream | 174230 | 23258136 ~ 23261055 (+) |
| G196140 | NA | non-coding | downstream | 270066 | 23353972 ~ 23354341 (+) |
| tasp1 | tasp1 | other | upstream | 388375 | 22647914 ~ 22692604 (+) |
| kif16bb | NA | other | upstream | 896487 | 22155402 ~ 22184492 (+) |
| G195653 | LOC102296834 | other | upstream | 1565851 | 21514526 ~ 21515128 (+) |
| fbxo11a | fbxo11,LOC104951339 | other | upstream | 1748402 | 21318610 ~ 21332577 (+) |
| G195518 | NA | other | upstream | 2327170 | 20752773 ~ 20753809 (+) |
| disc1 | disc1 | other | downstream | 478377 | 23562283 ~ 23611337 (+) |
| klhdc3 | klhdc3 | other | downstream | 735008 | 23818914 ~ 23851605 (+) |
| LOC120547848 | LOC103369904,LOC106907288,LOC107081732 | other | downstream | 1274020 | 24357926 ~ 24367599 (+) |
| LOC120548495 | ate1 | other | downstream | 1284048 | 24367954 ~ 24426502 (+) |
| G196439 | wdr11 | other | downstream | 1480644 | 24564550 ~ 24569167 (+) |
