Gene
RNA
| Item | Value |
|---|---|
| gene id | mgme1 |
| gene name | mgme1,LOC102788050 |
| gene type | coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053130.1 |
| NCBI id | CM020927.1 |
| chromosome length | 36824488 |
| location | 22131121 ~ 22133520 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| mgme1 | Predicted to enable single-stranded DNA exodeoxyribonuclease activity. Predicted to be involved in mitochondrial DNA replication. Predicted to act upstream of or within mitochondrial DNA repair. Predicted to be active in mitochondrion. Is expressed in several structures, including digestive system; lens; solid lens vesicle; vasculature; and ventral mesoderm. Human ortholog(s) of this gene implicated in mitochondrial DNA depletion syndrome 11. Orthologous to human MGME1 (mitochondrial genome maintenance exonuclease 1). |
| description |
|---|
| mitochondrial genome maintenance exonuclease 1-like |
| id | description |
|---|---|
| K19465 | MGME1, DDK1; mitochondrial genome maintenance exonuclease 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_039783871.1 | True | 1527 | mRNA | 0.46 | 5 | 22131121 | 22133520 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cfl1l | NA | coding | upstream | 29254 | 22099306 ~ 22101867 (+) |
| LOC120547561 | LOC103358480,LOC103387545,LOC101064754,LOC103134145,LOC108234077,LOC106959257 | coding | upstream | 36898 | 22088107 ~ 22094223 (+) |
| mrpl14 | mrpl14,LOC102799944 | coding | upstream | 58205 | 22070881 ~ 22072916 (+) |
| LOC120548288 | NA | coding | upstream | 97892 | 22025958 ~ 22033229 (+) |
| LOC120547713 | psap,LOC104957284 | coding | upstream | 331027 | 21790970 ~ 21800094 (+) |
| ephx5 | ephx1,LOC103358491,LOC102206915 | coding | downstream | 16428 | 22149948 ~ 22153326 (+) |
| flrt3 | flrt3 | coding | downstream | 419486 | 22553006 ~ 22563704 (+) |
| jag1b | jag1,LOC102209890 | coding | downstream | 761311 | 22894831 ~ 22920312 (+) |
| mkks | mkks | coding | downstream | 825789 | 22959309 ~ 22963954 (+) |
| spast | spast,LOC103374668 | coding | downstream | 844632 | 22978152 ~ 22982603 (+) |
| G195771 | snx5 | non-coding | upstream | 4833 | 22125550 ~ 22126288 (+) |
| G195757 | capn11,LOC103387546 | non-coding | upstream | 47381 | 22081129 ~ 22083740 (+) |
| G195749 | NA | non-coding | upstream | 74328 | 22052531 ~ 22056793 (+) |
| G195711 | tacc2,LOC104945673,LOC102313393 | non-coding | upstream | 81309 | 21965685 ~ 22049812 (+) |
| G195687 | NA | non-coding | upstream | 349682 | 21779247 ~ 21781439 (+) |
| G195783 | NA | non-coding | downstream | 8705 | 22142225 ~ 22144422 (+) |
| G195881 | NA | non-coding | downstream | 12783 | 22146303 ~ 22146792 (+) |
| LOC120547767 | NA | non-coding | downstream | 77622 | 22211142 ~ 22249845 (+) |
| G195915 | NA | non-coding | downstream | 502218 | 22635738 ~ 22640924 (+) |
| G195941 | NA | non-coding | downstream | 575416 | 22708936 ~ 22709573 (+) |
| G195653 | LOC102296834 | other | upstream | 615993 | 21514526 ~ 21515128 (+) |
| fbxo11a | fbxo11,LOC104951339 | other | upstream | 798544 | 21318610 ~ 21332577 (+) |
| G195518 | NA | other | upstream | 1377312 | 20752773 ~ 20753809 (+) |
| G195448 | thbs2 | other | upstream | 1600806 | 20529767 ~ 20530315 (+) |
| adgrb3 | adgrb3 | other | upstream | 1974173 | 20041774 ~ 20156948 (+) |
| kif16bb | NA | other | downstream | 21882 | 22155402 ~ 22184492 (+) |
| tasp1 | tasp1 | other | downstream | 514394 | 22647914 ~ 22692604 (+) |
| disc1 | disc1 | other | downstream | 1428763 | 23562283 ~ 23611337 (+) |
| klhdc3 | klhdc3 | other | downstream | 1685394 | 23818914 ~ 23851605 (+) |
| LOC120547848 | LOC103369904,LOC106907288,LOC107081732 | other | downstream | 2224406 | 24357926 ~ 24367599 (+) |
