atl2 (LOC103370707)


Basic Information

Item Value
gene id atl2
gene name LOC103370707
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 11989367 ~ 12007678 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039783962.1
cTTTGACGTCAGCCACGTTAGATTTCAGTAGTCCAAGATGGCGGAGGTGAGCGGGTTGAGGAGCCGAAATCACTTCGAGCCCAGCTGCAAAAGCCGAGTCGTTGACGAAGGCTTGAGTGGTGTGGAAGATGTCCCCATTTTTCGGCATAAGCAGAGGCCTCCTTTAGCCATGTCCGAAGACCTGGAGGATGAATTGCTCCCCAGCACTACAGCCTCAAACTCGGGCAAAAATGCCAGCCTCGCCCCCTCAACAGTTGAAGAGACTCGGGAAGAAGAGGATGTGGTAGAGGAAGAGAAGGCCAGGCCCATCCAGATTGTCCTGGCCAACGAGGAGGAGCACAGCTTTGAGCTGGACGCTGCAGCGCTGGAGAGGATCCTGCTGCAGGATCACGTCAAGGACCTGAATGTGGTGGTCGTGTCCGTGGCCGGGGCCTTCCGCAAGGGCAAGTCCTTCCTACTGGACTTCATGCTGCGCTACATGCACAGCCAGGGCAAGCCGTGGATGGGAGGGGATGATGAGCCCCTGACAGGGTTTACCTGGAGAGGAGGCTGCGAGAGGGAGACCACAGGAATTCAGATCTGGAGCGAAGTCTTTGTGGTCGACAAGCCTGATGGCAGCAAGGTCGCGGTGCTCCTCGTTGACACTCAGGGAGCCTTTGACAGCCAGTCCACCATAAAGGACTGTGCTACTGTGTTCGCCCTCAGCACAATGACCAGCTCTGTACAGGTGTACAATCTGTCCCAGAACATACAGGAGGATGACCTGCAGCATTTGCAGCTCTTCACAGAATATGGCCGGCTGGCAATGGAAGAGATCTACCTGAAACCTTTCCAGTCCCTGATGTTTCTGATTCGGGACTGGTGTTATCCTTATGAACACGACTACGGACTGGAAGGAGGCAACAACTTCCTAAACAAAAGACTACAGGTGAAACAGAACCAACACGAAGAGCTGCAGAATGTCAGGAAGCACATCCACTCCTGCTTCTCCAACATCGGCTGCTTCCTGCTGCCACATCCGGGCCTCAAGGTGGCCACCAACCCTTACTTTGACGGCAGGCTGAAAGacaTCGATGATGATTTTAAGAGGGCGCTGGCCAAACTGGTGCCTCTCCTCCTGGCCCCAGACCGACTGGTGGAGAAGGAGATCGGAGGGAACAAAGTCACCTGCAGAGATCTCCTGGAGTACTTCAAGGCTTACATAAAGATCTACCAAGGGGAGGAACTGCCTCACCCAAAGTCCATGCTGCAGGCGACAGCAGAAGCCAACAACTTGACTGCTGTGGCGGGAGCCAAAGACCTGTACGGCAAGAAAATGGAGCTGGTCTGCGGTGGGGACAAGCCATACATTGCCCCGGCCGACCTGGAGCGCTTCCACGAGGAGTTTCGCGAGCACTCGGTGCATTACTTCCGCTCCGTGAAGAAAATGGGCGGCGAGGAGTTCTGCCAGCGCTACCAGAGCCAGCTGGAGTCCGAGCTGGACGAGACCTACACCAACTTCTCCAAGCACAACGACGGCAAAAACATCTTCTACACAGCACGCACACCTGCCACGCTTTTCGCAGTCATGTTTGCCACCTACGTGGTGTCCGGCGTGACGGGCTTCATCGGGCTGAGCACCTTAGCGGTGCTGTCTAACCTGGTCATGGGCGTGGCGCTGCTTTCGCTCTGCGCCTGGGCGTATGTGAAGTATTCCGGAGAGTTTCGGGAGTTGGGAACGATGATAGATCTGGTGGCCGAGACGCTCTGGGAACAGAAGACGGTCAGAAAGGTGAGCGGTGTCGGTTCCCATTTCTCTGATCTTCTGCCTGCCgtatttcctttccttttacTTTCTCCACCTGCTGCTACCAGTCTCCCCCtattcttttcatttgtttggtTCAACATCTACCAAGTTTCCTCAGGCTTTAATCTCTCCTTatctttttgttactttttttttttattattatttctgctTAATCTCTTCCCCAAATGTCTGGATACATCTTTCTCATCTTTTATCCCTCCTGCTCCAGTGTTTGTCTCGCTGTCAGTCTTAGTTCTTGTTTTAACTCTCCCGTTCCTCCCTGCTGTCCTCTCAGGTGTTTTCCAAACTTTTGGAGCCTGTCAGGAGCCGCCTGGCTTGGCccgtctctctcctcccttcatTCCCACCAGGAGCGATGCTGGGACTCCAGGCTCTGTCTcctctcaacaacaacaacaacaactacaagAAGATGAACTAGCTACTAGCCCGATTTACAGACTGTTAAACTTCCTTCTCATATCCACACTTCCTTTGCTGGCTTCTTTTTATTGCTAACGTTCAGTCCAATGGTGCTGGATTCTTGTACTTTAACCCCTGGACCCCCTCTGAACACTGGCAGGCCAGGCTCATCTCAGGATCTCATGGACGCCTGCCCAAATGGTTTTGAAGCCACTAAGTGAACATTATATGGAAGACAACGTCCGACAGACGGTGGTTAACTCCCTCAAAGCCAGCTTGACAGAGCAGAGCTCACAGC
>XM_039783963.1
cTTTGACGTCAGCCACGTTAGATTTCAGTAGTCCAAGATGGCGGAGGTGAGCGGGTTGAGGAGCCGAAATCACTTCGAGCCCAGCTGCAAAAGCCGAGTCGTTGACGAAGGCTTGAGTGGTGTGGAAGATGTCCCCATTTTTCGGCATAAGCAGAGGCCTCCTTTAGCCATGTCCGAAGACCTGGAGGATGAATTGCTCCCCAGCACTACAGCCTCAAACTCGGGCAAAAATGCCAGCCTCGCCCCCTCAACAGTTGAAGAGACTCGGGAAGAAGAGGATGTGGTAGAGGAAGAGAAGGCCAGGCCCATCCAGATTGTCCTGGCCAACGAGGAGGAGCACAGCTTTGAGCTGGACGCTGCAGCGCTGGAGAGGATCCTGCTGCAGGATCACGTCAAGGACCTGAATGTGGTGGTCGTGTCCGTGGCCGGGGCCTTCCGCAAGGGCAAGTCCTTCCTACTGGACTTCATGCTGCGCTACATGCACAGCCAGGGCAAGCCGTGGATGGGAGGGGATGATGAGCCCCTGACAGGGTTTACCTGGAGAGGAGGCTGCGAGAGGGAGACCACAGGAATTCAGATCTGGAGCGAAGTCTTTGTGGTCGACAAGCCTGATGGCAGCAAGGTCGCGGTGCTCCTCGTTGACACTCAGGGAGCCTTTGACAGCCAGTCCACCATAAAGGACTGTGCTACTGTGTTCGCCCTCAGCACAATGACCAGCTCTGTACAGGTGTACAATCTGTCCCAGAACATACAGGAGGATGACCTGCAGCATTTGCAGCTCTTCACAGAATATGGCCGGCTGGCAATGGAAGAGATCTACCTGAAACCTTTCCAGTCCCTGATGTTTCTGATTCGGGACTGGTGTTATCCTTATGAACACGACTACGGACTGGAAGGAGGCAACAACTTCCTAAACAAAAGACTACAGGTGAAACAGAACCAACACGAAGAGCTGCAGAATGTCAGGAAGCACATCCACTCCTGCTTCTCCAACATCGGCTGCTTCCTGCTGCCACATCCGGGCCTCAAGGTGGCCACCAACCCTTACTTTGACGGCAGGCTGAAAGacaTCGATGATGATTTTAAGAGGGCGCTGGCCAAACTGGTGCCTCTCCTCCTGGCCCCAGACCGACTGGTGGAGAAGGAGATCGGAGGGAACAAAGTCACCTGCAGAGATCTCCTGGAGTACTTCAAGGCTTACATAAAGATCTACCAAGGGGAGGAACTGCCTCACCCAAAGTCCATGCTGCAGGCGACAGCAGAAGCCAACAACTTGACTGCTGTGGCGGGAGCCAAAGACCTGTACGGCAAGAAAATGGAGCTGGTCTGCGGTGGGGACAAGCCATACATTGCCCCGGCCGACCTGGAGCGCTTCCACGAGGAGTTTCGCGAGCACTCGGTGCATTACTTCCGCTCCGTGAAGAAAATGGGCGGCGAGGAGTTCTGCCAGCGCTACCAGAGCCAGCTGGAGTCCGAGCTGGACGAGACCTACACCAACTTCTCCAAGCACAACGACGGCAAAAACATCTTCTACACAGCACGCACACCTGCCACGCTTTTCGCAGTCATGTTTGCCACCTACGTGGTGTCCGGCGTGACGGGCTTCATCGGGCTGAGCACCTTAGCGGTGCTGTCTAACCTGGTCATGGGCGTGGCGCTGCTTTCGCTCTGCGCCTGGGCGTATGTGAAGTATTCCGGAGAGTTTCGGGAGTTGGGAACGATGATAGATCTGGTGGCCGAGACGCTCTGGGAACAGAAGACGGTCAGAAAGGTGTTTTCCAAACTTTTGGAGCCTGTCAGGAGCCGCCTGGCTTGGCccgtctctctcctcccttcatTCCCACCAGGAGCGATGCTGGGACTCCAGGCTCTGTCTcctctcaacaacaacaacaacaactacaagAAGATGAACTAGCTACTAGCCCGATTTACAGACTGTTAAACTTCCTTCTCATATCCACACTTCCTTTGCTGGCTTCTTTTTATTGCTAACGTTCAGTCCAATGGTGCTGGATTCTTGTACTTTAACCCCTGGACCCCCTCTGAACACTGGCAGGCCAGGCTCATCTCAGGATCTCATGGACGCCTGCCCAAATGGTTTTGAAGCCACTAAGTGAACATTATATGGAAGACAACGTCCGACAGACGGTGGTTAACTCCCTCAAAGCCAGCTTGACAGAGCAGAGCTCACAGC
>XM_039783964.1
cTTTGACGTCAGCCACGTTAGATTTCAGTAGTCCAAGATGGCGGAGGTGAGCGGGTTGAGGAGCCGAAATCACTTCGAGCCCAGCTGCAAAAGCCGAGTCGTTGACGAAGGCTTGAGTGGTGTGGAAGATGTCCCCATTTTTCGGCATAAGCAGAGGCCTCCTTTAGCCATGTCCGAAGACCTGGAGGATGAATTGCTCCCCAGCACTACAGCCTCAAACTCGGGCAAAAATGCCAGCCTCGCCCCCTCAACAGTTGAAGAGACTCGGGAAGAAGAGGATGTGGTAGAGGAAGAGAAGGCCAGGCCCATCCAGATTGTCCTGGCCAACGAGGAGGAGCACAGCTTTGAGCTGGACGCTGCAGCGCTGGAGAGGATCCTGCTGCAGGATCACGTCAAGGACCTGAATGTGGTGGTCGTGTCCGTGGCCGGGGCCTTCCGCAAGGGCAAGTCCTTCCTACTGGACTTCATGCTGCGCTACATGCACAGCCAGGGCAAGCCGTGGATGGGAGGGGATGATGAGCCCCTGACAGGGTTTACCTGGAGAGGAGGCTGCGAGAGGGAGACCACAGGAATTCAGATCTGGAGCGAAGTCTTTGTGGTCGACAAGCCTGATGGCAGCAAGGTCGCGGTGCTCCTCGTTGACACTCAGGGAGCCTTTGACAGCCAGTCCACCATAAAGGACTGTGCTACTGTGTTCGCCCTCAGCACAATGACCAGCTCTGTACAGGTGTACAATCTGTCCCAGAACATACAGGAGGATGACCTGCAGCATTTGCAGCTCTTCACAGAATATGGCCGGCTGGCAATGGAAGAGATCTACCTGAAACCTTTCCAGTCCCTGATGTTTCTGATTCGGGACTGGTGTTATCCTTATGAACACGACTACGGACTGGAAGGAGGCAACAACTTCCTAAACAAAAGACTACAGGTGAAACAGAACCAACACGAAGAGCTGCAGAATGTCAGGAAGCACATCCACTCCTGCTTCTCCAACATCGGCTGCTTCCTGCTGCCACATCCGGGCCTCAAGGTGGCCACCAACCCTTACTTTGACGGCAGGCTGAAAGacaTCGATGATGATTTTAAGAGGGCGCTGGCCAAACTGGTGCCTCTCCTCCTGGCCCCAGACCGACTGGTGGAGAAGGAGATCGGAGGGAACAAAGTCACCTGCAGAGATCTCCTGGAGTACTTCAAGGCTTACATAAAGATCTACCAAGGGGAGGAACTGCCTCACCCAAAGTCCATGCTGCAGGCGACAGCAGAAGCCAACAACTTGACTGCTGTGGCGGGAGCCAAAGACCTGTACGGCAAGAAAATGGAGCTGGTCTGCGGTGGGGACAAGCCATACATTGCCCCGGCCGACCTGGAGCGCTTCCACGAGGAGTTTCGCGAGCACTCGGTGCATTACTTCCGCTCCGTGAAGAAAATGGGCGGCGAGGAGTTCTGCCAGCGCTACCAGAGCCAGCTGGAGTCCGAGCTGGACGAGACCTACACCAACTTCTCCAAGCACAACGACGGCAAAAACATCTTCTACACAGCACGCACACCTGCCACGCTTTTCGCAGTCATGTTTGCCACCTACGTGGTGTCCGGCGTGACGGGCTTCATCGGGCTGAGCACCTTAGCGGTGCTGTCTAACCTGGTCATGGGCGTGGCGCTGCTTTCGCTCTGCGCCTGGGCGTATGTGAAGTATTCCGGAGAGTTTCGGGAGTTGGGAACGATGATAGATCTGGTGGCCGAGACGCTCTGGGAACAGGTTTTGAAGCCACTAAGTGAACATTATATGGAAGACAACGTCCGACAGACGGTGGTTAACTCCCTCAAAGCCAGCTTGACAGAGCAGAGCTCACAGCACACCAAGTTAAAGACTCACTGACGCCCC

Function

NR:

description
PREDICTED: atlastin-2-like

GO:

id name namespace
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K17339 ATL; atlastin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039783962.1 True 2513 mRNA 0.53 15 11989396 12007678
XM_039783963.1 False 2197 mRNA 0.55 16 11989396 12007678
XM_039783964.1 False 1882 mRNA 0.55 14 11989367 12007678

Neighbor

gene id symbol gene type direction distance location
akt3a akt3,LOC108244154,LOC107099926,LOC104931217,LOC100691860,LOC105927955 coding downstream 155297 11769396 ~ 11834070 (-)
arid5b arid5b coding downstream 331264 11584571 ~ 11658103 (-)
cep170aa cep170 coding downstream 416749 11530590 ~ 11572618 (-)
dync2li1 dync2li1 coding downstream 465229 11518901 ~ 11524138 (-)
abcg8 abcg8 coding downstream 481661 11495070 ~ 11507706 (-)
olig3 olig3 coding upstream 50747 12058425 ~ 12060064 (-)
si:ch73-52p7.1 LOC104931135 coding upstream 70978 12078656 ~ 12083832 (-)
map3k21 LOC103372805,LOC104946551,LOC102290220,LOC102205779 coding upstream 110057 12117735 ~ 12141600 (-)
rgs17 LOC103372808,LOC101482424 coding upstream 174612 12182290 ~ 12203328 (-)
ccser2a LOC104963914 coding upstream 850051 12857729 ~ 12906350 (-)
G193205 NA non-coding downstream 121569 11793674 ~ 11867798 (-)
G193201 NA non-coding downstream 180811 11763663 ~ 11808556 (-)
G193191 NA non-coding downstream 273508 11715173 ~ 11715859 (-)
G193149 NA non-coding downstream 381553 11599779 ~ 11607814 (-)
G193148 NA non-coding downstream 405207 11582258 ~ 11584160 (-)
G193247 NA non-coding upstream 8911 12016589 ~ 12017133 (-)
G193248 NA non-coding upstream 9481 12017159 ~ 12017406 (-)
G193305 NA non-coding upstream 169931 12177609 ~ 12178477 (-)
G193306 NA non-coding upstream 172271 12179949 ~ 12180953 (-)
G193307 NA non-coding upstream 219430 12227108 ~ 12227308 (-)
adss2 adss,LOC107098117,LOC107375820 other downstream 70553 11888092 ~ 11918814 (-)
lyrm7 lyrm7 other downstream 462083 11524906 ~ 11527284 (-)
camkmt camkmt other downstream 631695 11236314 ~ 11357672 (-)
LOC120548461 NA other downstream 1026477 10956572 ~ 10962890 (-)
LOC120548128 LOC103374855 other downstream 1035344 10890469 ~ 10954023 (-)
phactr2 phactr2 other upstream 289811 12297489 ~ 12348599 (-)
G193427 dnajc9 other upstream 940017 12947695 ~ 12948609 (-)
mzt1 mzt1 other upstream 1698047 13705725 ~ 13707932 (-)
dhx32b LOC102782489,LOC102202651,LOC100703771,LOC101477466,LOC102310286 other upstream 2216990 14224668 ~ 14233001 (-)
LOC120548283 NA other upstream 2438555 14446233 ~ 14447528 (-)

Expression


Co-expression Network