LOC120548163


Basic Information

Item Value
gene id LOC120548163
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 20407344 ~ 20410929 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784226.1
TCACACTCATTTATTTTTCCATCAAGCCACGCTTGTACGTGGCTCATCATGTGAGGATAGCAGTTGTTTTTGGGTGGGACATGGATGGCTCCTGGTCGGTGTCCCTGCAGGCAGCATCGGCCAACGCGAGCTGGCCAAAGGGCGCGAGGCCCGGCGTGTCCGGGCAGATGCAGCTGCTCCTGGAGATCCTCATGGTGCTGATGTGTTTGGGCGCTGTGACAGgTAATATTcttgtcattgttattgtggCTGCAACCAAGACTTTCCACTCGGTGGCGTCAGTGCTGATTATGAACCTGGCCATCAGTGACCTCCTGGTGGGCGTTGGAGTGATGCCTTTTGTTGCTTTGTCCATCATGAACCATGGATGGGTGGATTGTACTGACCTCTGCCAGTACGTGGGCTACACCTCCTCTGTTTACTGTACAGCTTCTGTACTGACATTAGCAGCTATCGCCCTCGACCGCTACCACTCCATCGTGGACTGCCTGCGTTACAGCTCCCGCTGCACCCTGTGGAGGACCTGCGCTGTGGTCCTGTGGATCTGGCTGCAGGCCCTGGTCACCAGTTGTCCTCCCCTGCTgggctggagctctgtcagctATGTGGAACCCATGTACAGCTGTGCTGTCAACTGGGCCAGCAGTCCCAGCTACACGACTTTCATGGCTGCCCTCTCCTACCTCATACCGGCAGTGGTCATCCTCTTCTGCTACGTGAACATCGTCAAGGTGGCCCGCAGCCATGCCAGGAGGATTCATACATTGGAGGACTCTGTACAGCGCAGCAGGAATCCAAGCTTTGCCCGTGTTGATTCATCTCACCAGCACTGTGGGAGCCTCCACTGCCCCTCGAGACTGATTTATCATGTAAGTGGACAGTTTGTGTCTGAGGTCAGTACAGACGAGGGGAATTATATCAGCCCTACTCTCCCTGATTCTGTGACAGAGCAGAATAACCCTGCATCCAGACGTTTGTTCTCCTTCCTGGCACAGAGCACCCCCCAGCCATCGCTGCAGCACCATAGCCATCATGGAGTGCTTCGTCTCTTCCTGGTCATCTCAGCCTTCTTCCTCTGCTGGACACCATACATAGGCGTGGCCCTGGTTCAGGCAACAGAAACTGCAATCTCAGGCCAACCCAGCCTCGTCCCATCCTCTGCTGTAACCTTTTCGTACTGGCTGGTGTTACTGAACTCTGACATCAATCCACTGCTGTACGCTCTACTTAGCAAACGTTTCCAGGGTGCTCTTCAGGGACTGAGGCAAAAAATAAGAGCTCGTCTGGGGAGCGTGGTGGGCAGGGAAAGGGGTTTCAGGGCAGAGGGAGATGAATGCAGGAGCAGCAACCCCTGCACTCTGACCACCACCCACCCTGGTCCACCTTCCTCTGAGAGTTCAACCTGTGATGCCTCCAAGTATTCCTCCTCCATTTTTACTGTTAGCACTGACTTCAAACATCACTCTAGGGAGCATCGTTGCAATGTGTGTCACCACGAAAATACTTTCCCATCATGCTCCATTTGGCAAGATGCTGGTGGTGAAGGGAGAGTGGACTGCCTGCAGGTGCCCTCTCGGCCACAAGAGGGCAGCAGATTACCTTTCTCTGCTCTGACTCAGGATCATCAGGCCACTTTCTTCTACGGACAGATTACAGTCAGAGTGGAGCATGATGTTTGTTAGTCTGATATCTGCAGATGTTGTTGCAGAATACTTCTTATAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784226.1 True 1723 mRNA 0.54 3 20407344 20410929

Neighbor

gene id symbol gene type direction distance location
tarbp1 tarbp1 coding upstream 174 20393063 ~ 20407170 (+)
zgc:172136 frmd1,LOC104965675,LOC102789325 coding upstream 14696 20381431 ~ 20392648 (+)
trnaw-cca_26 NA coding upstream 29061 20378212 ~ 20378283 (+)
fam135a fam135a coding upstream 35801 20355661 ~ 20371543 (+)
LOC120548537 col19a1 coding upstream 77122 20234539 ~ 20330222 (+)
map3k4 map3k4 coding downstream 71327 20482256 ~ 20505792 (+)
psme4a psme4 coding downstream 194939 20605868 ~ 20640367 (+)
gpr75 gpr75 coding downstream 229904 20640833 ~ 20645170 (+)
LOC120547712 nrxn1,LOC102793382,LOC103356500 coding downstream 428658 20839587 ~ 21105300 (+)
lhcgr LOC103358126 coding downstream 820099 21231028 ~ 21247385 (+)
G195361 lmbrd1 non-coding upstream 229707 20176520 ~ 20177637 (+)
G195285 NA non-coding upstream 639027 19768074 ~ 19768317 (+)
LOC120548551 NA non-coding upstream 1046128 19358047 ~ 19361216 (+)
G195115 gclc non-coding upstream 1132122 19272600 ~ 19275222 (+)
G195087 NA non-coding upstream 1188302 19218736 ~ 19219042 (+)
G195511 NA non-coding downstream 234381 20645310 ~ 20658889 (+)
G195520 NA non-coding downstream 358965 20769894 ~ 20770215 (+)
G195565 NA non-coding downstream 854356 21265285 ~ 21265663 (+)
G195570 NA non-coding downstream 867918 21278847 ~ 21280312 (+)
G195575 foxn2 non-coding downstream 874502 21285431 ~ 21289210 (+)
adgrb3 adgrb3 other upstream 250396 20041774 ~ 20156948 (+)
gfral NA other upstream 977248 19426475 ~ 19430096 (+)
zgc:163080 tmem14a other upstream 1190921 19212832 ~ 19216423 (+)
mcph1 mcph1,LOC102776803 other upstream 1207339 19167986 ~ 19200005 (+)
G195036 LOC103369008,LOC106520712 other upstream 1275403 19126220 ~ 19131941 (+)
G195448 thbs2 other downstream 118838 20529767 ~ 20530315 (+)
G195518 NA other downstream 341844 20752773 ~ 20753809 (+)
fbxo11a fbxo11,LOC104951339 other downstream 907681 21318610 ~ 21332577 (+)
G195653 LOC102296834 other downstream 1103597 21514526 ~ 21515128 (+)
kif16bb NA other downstream 1744473 22155402 ~ 22184492 (+)

Expression


Co-expression Network