ppm1ba (ppm1b)


Basic Information

Item Value
gene id ppm1ba
gene name ppm1b
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 11380833 ~ 11400517 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784266.1
AACTGCATGTTGAAAACGAACGTCATCTGCTTCATACATTTAGCTAGCTTTAGCCAAAATTAGCTAGTTGTTCAAACCATAGATACAGCTTACCGAAACgagagtttttattttcaacCGACAGCCTACGCAGCGCTTATTTATTTGGTGCTCTCTGGGTTTACAGTGCCAAACATGTATATAACAGCCTTGTTGCGATGCAGAGACATGCTGAAAGCAGAACTGGTCGTGTAAAATGCTGGCTAGCCTAATCAAAGCTAGCTGACGAGCAGGGGCCGAGAAACGAAAGtaacgttaacattaacgaGAGATAAGCCTATCACAAGAATCCTGGACACAATTAAACATACTTGCCACTGAAGCCACAAGAAGAAGAACTGATAGAGGTAACGTTAGTTCCTTTCCTACAAAGTAGCAGTGGGTCTCTCTCTAGGGCAGAGCCATGGGTGCATTCCTGGACAAGCCCAGGACAGAGAAGCACAACTTGCATGCTGAGGGCAATGGCCTGCGCTATGGGCTGAGCTCCATGCAGGGCTGGCGGGTGGAGATGGAGGATGCTCACACAGCTGTGTTGGGACTTCCTGCTCCTGGTATGACTGACTGGTCCTTTTTTGCCGTGTATGATGGTCACGCTGGCTCAAGGGTTGCCAACTACTGCTCTAAGCATCTTCTGGAACACATAATCAGTACTAGCTTAGGGGCCGGAGGGATCCAATGTTCCCAGGCTGGTTCAGACAGCTCCACCAGTGACCCTCCAGCACTGGTTCCTCCTACAGTTGAGACTGTGAAATCCAGGATCCGGACAGGCTTCCTGAGAATTGATGAGCACATGCGCAGCTTTTCTGACCTTCGAAACGGCATGGACCGTAGTGGCTCTACAGCAGTGGGAATCCTCTTGTCACCTGATCATTTCTTCTTCATCAACTGTGGCGATTCTCGAGCTGTTCTATACCGCAATTCACATGTGTGCTTCTCCACACTTGACCACAAGCCTTGCAACCCACGTGAGAGAGAGCGCATTCAGAATGCCGGCGGCTCAGTGATGATTCAGAGGGTTAATGGGTCACTGGCTGTATCAAGGGCCTTGGGGGACTTTGATTACAAGTGTGTGGAGGGGAAGGGCCCCACAGAGCAGCTGGTTAGCCCCGAACCAGAAGTGTTTGAGATGGTTCGGGCCCCTGAACAGGATCAGTTTGTGATCCTGGCGTGTGATGGTATCTGGGATGTTATGTCCAATGAGGAGCTGTGTGAGTTTGTGAAATCTAGGCTTGAGGTGTCTGATGATCTGGAGAGAGTCTGCAATGAAGTGGTGGACACCTGCCTGCACAAGGGGAGTCGGGATAACATGAgtattgtgttagtgtgttttccCAACGCTCCCAAAGTGTCGGAGGAAGCTGTGAGGAAAGATGCTGAGCTCAACAAATATCTGGAGTCTCGAGTGGAAGAGATGCTGTCTCGGCCAGGGGAGCACGGGTTTCCTGACCTGGTAGAAGTGATGAGGAACCTGTCCACCGACATCGGCATGCCCGTGCTGCCACCAGGGGGAGGCTTTCACAGCAAACAAAGTGTTATTGAAGCAGTATACAACCGTCTAAATCCATACAGGGAGGAAGATGGGAGCGGAGCTGAGTTGGAGTACAACTGGTAGCTGTCCAGCACAACTGCCTGATCAAGAACAGGACCATTTTTCCACACCAGATCACATCCATAATCACCTTTTTAATTtcctctgggatttgttttatttatttttattccccACACTGAGAGATCAATCGAAGCAAAAATCCTGGTTTTTAAAACCTTATGTGGAGGACTGCAAAACCGATTTACTTGGTTCTTTTTGTAGAACAAAACAGGGAAAAATACAAACAACTACATTGATATCTGAAAGCAGAACTACAATTACAGTATATACTTCAGAGAAGCAAACGGGCACAGTTTGTCTTGCCCCTCGTTTTCTTGTGGTGGTTGTTTTGGTTGTGGATTGACACACAGGAGCAGCCCTGCTCTGAACGCTTTGGGGCTTCATGGTGCCTTTCTCAGAACTGAAAGAGAAGGGAGACCCTCAAAAGTCAGCCAGACAGGCATTCACTCCTGGATGTTTGTAAGATACTAAAAAGACTAAAGTGGTTTGTTGGCTGCATTTTTTATGGCATTATTTGTTTTGAAGTGTGAACTTTACTTGCACCTGACTGGCAGCCAATCGACCACACAAGCCTGCGACTCCCACACACCTCAAGCTATGCTGTCCAGTTCAGGCAAGCTTAGTGTTCTGGGCATACTGGTACTCTAACGGGGGCCCAACACTTCACCTGCCCATGCTCCTGGTTCGCTGGAGGCAGCCTCACAGAACTCCACGCTATCCAAAGACTACTGGGTTACAGCCTCAAATTCATCATCTGAGGCTACACACCTGAACACGAGGGGAGAGCTCATGAGAGAACCAAGTCTGTCTGGCAACTAATTTCAGTTTGGCTCCTCCATACCGTGTCCAAACTAAAGTAAGTCATGGGCTGGTGTGCCTGGCTGCAGATAGGAATTACATGGAGATGGTTTAAACTCAAGTGTGATGACTCTTCTTGCACGTCCCTGCTCACTTTCTCTCCTCTTGCCCCTTAAAGGATGTTATCAAACAGTTGATTTCTCACTCTtcccctctgcctctctcttttcGCTTTCTCTTCATATGACAGAAGAGACTCGGCCGTCATTTGCATTGGCAGACATTGCCAGAAACCTAAGCTTTTGAGCCTGCTGTTGTTGAAGAGATAGAAAGATAGAaattatattcatatatatacagatatatattttgatttgttttcatCTTAATTCCCAGCCATGGTGTTCGTTGTGCATTGTGGTCtgcgtgtgtgcacgttttgtgtaGACAAATTTAAGacggaaaaaagtcaaagttgcACATAGCAACGTTCCAAAGACAGGGTATGGGGATAAAGTAATTCCAGCCTCACCTTCTTCTTCCCCATTTCTCctcaacacacaccacacacacacacacacacacacacacacacacacacacacacacacac
>XM_039784267.1
AACTGCATGTTGAAAACGAACGTCATCTGCTTCATACATTTAGCTAGCTTTAGCCAAAATTAGCTAGTTGTTCAAACCATAGATACAGCTTACCGAAACgagagtttttattttcaacCGACAGCCTACGCAGCGCTTATTTATTTGGTGCTCTCTGGGTTTACAGTGCCAAACATGTATATAACAGCCTTGTTGCGATGCAGAGACATGCTGAAAGCAGAACTGGTCGTGTAAAATGCTGGCTAGCCTAATCAAAGCTAGCTGACGAGCAGGGGCCGAGAAACGAAAGtaacgttaacattaacgaGAGATAAGCCTATCACAAGAATCCTGGACACAATTAAACATACTTGCCACTGAAGCCACAAGAAGAAGAACTGATAGAGGTAGCAGTGGGTCTCTCTCTAGGGCAGAGCCATGGGTGCATTCCTGGACAAGCCCAGGACAGAGAAGCACAACTTGCATGCTGAGGGCAATGGCCTGCGCTATGGGCTGAGCTCCATGCAGGGCTGGCGGGTGGAGATGGAGGATGCTCACACAGCTGTGTTGGGACTTCCTGCTCCTGGTATGACTGACTGGTCCTTTTTTGCCGTGTATGATGGTCACGCTGGCTCAAGGGTTGCCAACTACTGCTCTAAGCATCTTCTGGAACACATAATCAGTACTAGCTTAGGGGCCGGAGGGATCCAATGTTCCCAGGCTGGTTCAGACAGCTCCACCAGTGACCCTCCAGCACTGGTTCCTCCTACAGTTGAGACTGTGAAATCCAGGATCCGGACAGGCTTCCTGAGAATTGATGAGCACATGCGCAGCTTTTCTGACCTTCGAAACGGCATGGACCGTAGTGGCTCTACAGCAGTGGGAATCCTCTTGTCACCTGATCATTTCTTCTTCATCAACTGTGGCGATTCTCGAGCTGTTCTATACCGCAATTCACATGTGTGCTTCTCCACACTTGACCACAAGCCTTGCAACCCACGTGAGAGAGAGCGCATTCAGAATGCCGGCGGCTCAGTGATGATTCAGAGGGTTAATGGGTCACTGGCTGTATCAAGGGCCTTGGGGGACTTTGATTACAAGTGTGTGGAGGGGAAGGGCCCCACAGAGCAGCTGGTTAGCCCCGAACCAGAAGTGTTTGAGATGGTTCGGGCCCCTGAACAGGATCAGTTTGTGATCCTGGCGTGTGATGGTATCTGGGATGTTATGTCCAATGAGGAGCTGTGTGAGTTTGTGAAATCTAGGCTTGAGGTGTCTGATGATCTGGAGAGAGTCTGCAATGAAGTGGTGGACACCTGCCTGCACAAGGGGAGTCGGGATAACATGAgtattgtgttagtgtgttttccCAACGCTCCCAAAGTGTCGGAGGAAGCTGTGAGGAAAGATGCTGAGCTCAACAAATATCTGGAGTCTCGAGTGGAAGAGATGCTGTCTCGGCCAGGGGAGCACGGGTTTCCTGACCTGGTAGAAGTGATGAGGAACCTGTCCACCGACATCGGCATGCCCGTGCTGCCACCAGGGGGAGGCTTTCACAGCAAACAAAGTGTTATTGAAGCAGTATACAACCGTCTAAATCCATACAGGGAGGAAGATGGGAGCGGAGCTGAGTTGGAGTACAACTGGTAGCTGTCCAGCACAACTGCCTGATCAAGAACAGGACCATTTTTCCACACCAGATCACATCCATAATCACCTTTTTAATTtcctctgggatttgttttatttatttttattccccACACTGAGAGATCAATCGAAGCAAAAATCCTGGTTTTTAAAACCTTATGTGGAGGACTGCAAAACCGATTTACTTGGTTCTTTTTGTAGAACAAAACAGGGAAAAATACAAACAACTACATTGATATCTGAAAGCAGAACTACAATTACAGTATATACTTCAGAGAAGCAAACGGGCACAGTTTGTCTTGCCCCTCGTTTTCTTGTGGTGGTTGTTTTGGTTGTGGATTGACACACAGGAGCAGCCCTGCTCTGAACGCTTTGGGGCTTCATGGTGCCTTTCTCAGAACTGAAAGAGAAGGGAGACCCTCAAAAGTCAGCCAGACAGGCATTCACTCCTGGATGTTTGTAAGATACTAAAAAGACTAAAGTGGTTTGTTGGCTGCATTTTTTATGGCATTATTTGTTTTGAAGTGTGAACTTTACTTGCACCTGACTGGCAGCCAATCGACCACACAAGCCTGCGACTCCCACACACCTCAAGCTATGCTGTCCAGTTCAGGCAAGCTTAGTGTTCTGGGCATACTGGTACTCTAACGGGGGCCCAACACTTCACCTGCCCATGCTCCTGGTTCGCTGGAGGCAGCCTCACAGAACTCCACGCTATCCAAAGACTACTGGGTTACAGCCTCAAATTCATCATCTGAGGCTACACACCTGAACACGAGGGGAGAGCTCATGAGAGAACCAAGTCTGTCTGGCAACTAATTTCAGTTTGGCTCCTCCATACCGTGTCCAAACTAAAGTAAGTCATGGGCTGGTGTGCCTGGCTGCAGATAGGAATTACATGGAGATGGTTTAAACTCAAGTGTGATGACTCTTCTTGCACGTCCCTGCTCACTTTCTCTCCTCTTGCCCCTTAAAGGATGTTATCAAACAGTTGATTTCTCACTCTtcccctctgcctctctcttttcGCTTTCTCTTCATATGACAGAAGAGACTCGGCCGTCATTTGCATTGGCAGACATTGCCAGAAACCTAAGCTTTTGAGCCTGCTGTTGTTGAAGAGATAGAAAGATAGAaattatattcatatatatacagatatatattttgatttgttttcatCTTAATTCCCAGCCATGGTGTTCGTTGTGCATTGTGGTCtgcgtgtgtgcacgttttgtgtaGACAAATTTAAGacggaaaaaagtcaaagttgcACATAGCAACGTTCCAAAGACAGGGTATGGGGATAAAGTAATTCCAGCCTCACCTTCTTCTTCCCCATTTCTCctcaacacacaccacacacacacacacacacacacacacacacacacacacacacacacac
>XM_039784269.1
AACTGCATGTTGAAAACGAACGTCATCTGCTTCATACATTTAGCTAGCTTTAGCCAAAATTAGCTAGTTGTTCAAACCATAGATACAGCTTACCGAAACgagagtttttattttcaacCGACAGCCTACGCAGCGCTTATTTATTTGGTGCTCTCTGGGTTTACAGTGCCAAACATGTATATAACAGCCTTGTTGCGATGCAGAGACATGCTGAAAGCAGAACTGGTCGTGTAAAATGCTGGCTAGCCTAATCAAAGCTAGCTGACGAGCAGGGGCCGAGAAACGAAAGtaacgttaacattaacgaGAGATAAGCCTATCACAAGAATCCTGGACACAATTAAACATACTTGCCACTGAAGCCACAAGAAGAAGAACTGATAGAGGTAACGTTAGTTCCTTTCCTACAAAGTAGCAGTGGGTCTCTCTCTAGGGCAGAGCCATGGGTGCATTCCTGGACAAGCCCAGGACAGAGAAGCACAACTTGCATGCTGAGGGCAATGGCCTGCGCTATGGGCTGAGCTCCATGCAGGGCTGGCGGGTGGAGATGGAGGATGCTCACACAGCTGTGTTGGGACTTCCTGCTCCTGGTATGACTGACTGGTCCTTTTTTGCCGTGTATGATGGTCACGCTGGCTCAAGGGTTGCCAACTACTGCTCTAAGCATCTTCTGGAACACATAATCAGTACTAGCTTAGGGGCCGGAGGGATCCAATGTTCCCAGGCTGGTTCAGACAGCTCCACCAGTGACCCTCCAGCACTGGTTCCTCCTACAGTTGAGACTGTGAAATCCAGGATCCGGACAGGCTTCCTGAGAATTGATGAGCACATGCGCAGCTTTTCTGACCTTCGAAACGGCATGGACCGTAGTGGCTCTACAGCAGTGGGAATCCTCTTGTCACCTGATCATTTCTTCTTCATCAACTGTGGCGATTCTCGAGCTGTTCTATACCGCAATTCACATGTGTGCTTCTCCACACTTGACCACAAGCCTTGCAACCCACGTGAGAGAGAGCGCATTCAGAATGCCGGCGGCTCAGTGATGATTCAGAGGGTTAATGGGTCACTGGCTGTATCAAGGGCCTTGGGGGACTTTGATTACAAGTGTGTGGAGGGGAAGGGCCCCACAGAGCAGCTGGTTAGCCCCGAACCAGAAGTGTTTGAGATGGTTCGGGCCCCTGAACAGGATCAGTTTGTGATCCTGGCGTGTGATGGTATCTGGGATGTTATGTCCAATGAGGAGCTGTGTGAGTTTGTGAAATCTAGGCTTGAGGTGTCTGATGATCTGGAGAGAGTCTGCAATGAAGTGGTGGACACCTGCCTGCACAAGGGGAGTCGGGATAACATGAgtattgtgttagtgtgttttccCAACGCTCCCAAAGTGTCGGAGGAAGCTGTGAGGAAAGATGCTGAGCTCAACAAATATCTGGAGTCTCGAGTGGAAGAGATGCTGTCTCGGCCAGGGGAGCACGGGTTTCCTGACCTGGTAGAAGTGATGAGGAACCTGTCCACCGACATCGGCATGCCCGTGCTGCCACCAGGGGGAGGCTTTCACAGCAAACAAAGTGTTATTGAAGCAGTATACAACCGTCTAAATCCATACAGGGAGGAAGATGGGCCCTCCTGTTTCATTTGAGCGGAGCTGAGTTGGAGTACAACTGGTAGCTGTCCAGCACAACTGCCTGATCAAGAACAGGACCATTTTTCCACACCAGATCACATCCATAATCACCTTTTTAATTtcctctgggatttgttttatttatttttattccccACACTGAGAGATCAATCGAAGCAAAAATCCTGGTTTTTAAAACCTTATGTGGAGGACTGCAAAACCGATTTACTTGGTTCTTTTTGTAGAACAAAACAGGGAAAAATACAAACAACTACATTGATATCTGAAAGCAGAACTACAATTACAGTATATACTTCAGAGAAGCAAACGGGCACAGTTTGTCTTGCCCCTCGTTTTCTTGTGGTGGTTGTTTTGGTTGTGGATTGACACACAGGAGCAGCCCTGCTCTGAACGCTTTGGGGCTTCATGGTGCCTTTCTCAGAACTGAAAGAGAAGGGAGACCCTCAAAAGTCAGCCAGACAGGCATTCACTCCTGGATGTTTGTAAGATACTAAAAAGACTAAAGTGGTTTGTTGGCTGCATTTTTTATGGCATTATTTGTTTTGAAGTGTGAACTTTACTTGCACCTGACTGGCAGCCAATCGACCACACAAGCCTGCGACTCCCACACACCTCAAGCTATGCTGTCCAGTTCAGGCAAGCTTAGTGTTCTGGGCATACTGGTACTCTAACGGGGGCCCAACACTTCACCTGCCCATGCTCCTGGTTCGCTGGAGGCAGCCTCACAGAACTCCACGCTATCCAAAGACTACTGGGTTACAGCCTCAAATTCATCATCTGAGGCTACACACCTGAACACGAGGGGAGAGCTCATGAGAGAACCAAGTCTGTCTGGCAACTAATTTCAGTTTGGCTCCTCCATACCGTGTCCAAACTAAAGTAAGTCATGGGCTGGTGTGCCTGGCTGCAGATAGGAATTACATGGAGATGGTTTAAACTCAAGTGTGATGACTCTTCTTGCACGTCCCTGCTCACTTTCTCTCCTCTTGCCCCTTAAAGGATGTTATCAAACAGTTGATTTCTCACTCTtcccctctgcctctctcttttcGCTTTCTCTTCATATGACAGAAGAGACTCGGCCGTCATTTGCATTGGCAGACATTGCCAGAAACCTAAGCTTTTGAGCCTGCTGTTGTTGAAGAGATAGAAAGATAGAaattatattcatatatatacagatatatattttgatttgttttcatCTTAATTCCCAGCCATGGTGTTCGTTGTGCATTGTGGTCtgcgtgtgtgcacgttttgtgtaGACAAATTTAAGacggaaaaaagtcaaagttgcACATAGCAACGTTCCAAAGACAGGGTATGGGGATAAAGTAATTCCAGCCTCACCTTCTTCTTCCCCATTTCTCctcaacacacaccacacacacacacacacacacacacacacacacacacacacacacacac

Function

symbol description
ppm1b Enables protein serine/threonine phosphatase activity. Involved in several processes, including negative regulation of interferon-beta production; negative regulation of intracellular signal transduction; and peptidyl-threonine dephosphorylation. Located in cytosol and nucleolus.

NR:

description
protein phosphatase 1B isoform X4

GO: NA

KEGG:

id description
K04461 PPM1B, PP2CB; protein phosphatase 1B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784266.1 False 3062 mRNA 0.47 6 11380833 11400517
XM_039784267.1 False 3037 mRNA 0.47 6 11380833 11400517
XM_039784269.1 True 3079 mRNA 0.47 7 11380833 11400517

Neighbor

gene id symbol gene type direction distance location
slc3a1 slc3a1 coding downstream 3295 11367724 ~ 11377538 (-)
six3a six3,LOC104943435 coding downstream 241407 11135612 ~ 11139426 (-)
cfap36 cfap36 coding downstream 494191 10873872 ~ 10886642 (-)
LOC120548092 NA coding downstream 540245 10773396 ~ 10840588 (-)
synpo2la synpo2l,LOC104935862,LOC104941279 coding downstream 703672 10666118 ~ 10677161 (-)
abcg8 abcg8 coding upstream 94553 11495070 ~ 11507706 (-)
dync2li1 dync2li1 coding upstream 118384 11518901 ~ 11524138 (-)
cep170aa cep170 coding upstream 130073 11530590 ~ 11572618 (-)
arid5b arid5b coding upstream 184054 11584571 ~ 11658103 (-)
akt3a akt3,LOC108244154,LOC107099926,LOC104931217,LOC100691860,LOC105927955 coding upstream 368879 11769396 ~ 11834070 (-)
G193005 NA non-coding downstream 226865 11153711 ~ 11153968 (-)
G192988 NA non-coding downstream 361908 11018123 ~ 11018925 (-)
G192952 NA non-coding downstream 508392 10860173 ~ 10872441 (-)
G192929 NA non-coding downstream 612792 10767029 ~ 10768041 (-)
G192919 NA non-coding downstream 614422 10731907 ~ 10766411 (-)
G193117 NA non-coding upstream 37370 11437887 ~ 11438411 (-)
LOC120547711 NA non-coding upstream 107678 11508195 ~ 11508933 (-)
G193148 NA non-coding upstream 181741 11582258 ~ 11584160 (-)
G193149 NA non-coding upstream 199262 11599779 ~ 11607814 (-)
G193191 NA non-coding upstream 314656 11715173 ~ 11715859 (-)
camkmt camkmt other downstream 23161 11236314 ~ 11357672 (-)
LOC120548461 NA other downstream 417943 10956572 ~ 10962890 (-)
LOC120548128 LOC103374855 other downstream 426810 10890469 ~ 10954023 (-)
hhat hhat other downstream 725123 10633244 ~ 10655710 (-)
nphp1 NA other downstream 1197631 10168452 ~ 10183202 (-)
lyrm7 lyrm7 other upstream 124389 11524906 ~ 11527284 (-)
adss2 adss,LOC107098117,LOC107375820 other upstream 487575 11888092 ~ 11918814 (-)
phactr2 phactr2 other upstream 896972 12297489 ~ 12348599 (-)
G193427 dnajc9 other upstream 1547178 12947695 ~ 12948609 (-)
mzt1 mzt1 other upstream 2305208 13705725 ~ 13707932 (-)

Expression


Co-expression Network