dennd10 (fam45a)


Basic Information

Item Value
gene id dennd10
gene name fam45a
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 25605466 ~ 25610518 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784335.1
ATTGGTTGTCTTGCAGCGTGTCTCCTCCCGCTCCTGTCCCGGAAGAAGGAAGAGATTTCGCACAGGGAAAGAGAGAAGTCTGTTGACAGCAGAAATCCCACCCAGGCCACTGATAAGTTTCAACACATTGTACTTTCTTATTGAATCTGCACAGCATCGCGTTCTGTTATTTGGACGTAGCAGGAGCAATCAAGGTATGGAATATGGCAGCAACTGAAACGCAGCTTATGTTAAGCGTCGGATTAATAGAGAAAGATGTGAATGGAGACACACTGTGGGTATGGTGCTATCCCTCTGTGGGCTCAGACCTGAGGCAAGTCCTGCTCAGCAAGTGCTGTCTGACACAGGACAGCCGGGATTTCCACACCTTTGTGTTTGGTCAGTTCTGTCGCATCTGGTACTACATTACCACAGTGGAGGTGCAGGAACCTACAGCACTAAACAAGGTCACTCATTTTTCAATAGTTGTTACAGCAAAAGACTTCAACCCTGAGAAGTATGCTGCACTTAGTAGAATACTCTGCAGGATGTACACCAAACATGGCAGTCCAGTGAAGATGATGGAGGCTTATGTCACCGTGCTCACCAAAGGAATTTGCCAGAGTGATGAAAACGGCTCATTTCTAATTAAGGATTACGATGTTCGGAAAGCGTACTTGGCTGGTTCAGTTAAAGATGTTGTGTCTCAGTTTGGTATGGAGACAATCATCCTGTATACCGCTCTCATGCTGAAGAAGAGGATCGTTGTCCATCACCCTCGGATTGAAGCGTTGTTGGAGTTTACAAGAGTTCTGCCGACTCTGACGTGGCACAGGAAAGACTGGTCCATCCTGCACCCGTATGTGCACCTGACTGATGCTGAGCTAGAGGATCTCAAGAAATGCCCTGGATATGTAGCAGGATTTGTAGATCCGGAAGTAAGCAACAGATCAGACTTGTTTGATGTGTACGTGAACCTCCCAGACAGTGTCATCACAGTATCCCAGAGTGCCAAAGAGGCCATGGCTATGGGGAAGTTGCACAAGGACATCGGCCACCTTATTGTCCAGTCTGCAGAGGATGCTGAGAGATCAGATAGTCAGGTCATTAAGGATATTTCTGTCAAGACTAAAGAGATCCTTGCCAACTTGGTGGCCCTGGCTGATGAGTGCGAAGACTCTAAAATCACATTGGAAGGTTTAAAGCAGCATCATTTCCCTCCGGCGACGGAGAACTTCCTCTTTCATTTGGCAGCTGCCGAGCAGCTCTTACGGATATAGACCTGTTCTCAGACACCGTGCTGCAGGATGACGTTACTGTCAGCAGCATGCTGTTCTGTTTGTTGGGATGATTACTGTTGTCTGAAAGGCTTCTGCACACGCTCACTGTTACCATTAGAGTGTGCACAAGCCAATTTTCTTCTCACAGTAATCTTCACGTGAGGTAGGAGGGTGTCCCCAGCACTGATATGTGACATAAGCAGTACCAGGATGTTTTACATTATAGCGTGAAAGGCTAGCCATAGGCTTGGctatgtaagggataatgtagagcgagagGGCCATTATTGCAAAGTAAAGCCCGACCGGGTGATGCAGGACCCAACGTGAAAGGGTTAAAATTGCAAAAGTTGACCCGCTCACTCAACATTATCCCACTTATCACAAGGCTACTAATTTTAACCCACAATTtagattttaaaatgatttttattgatttaaaaatggtccTCCAGAGTCTATGATCTCGACTGCGTCTATAGCAGCCGTCTGCTATTCAGAAATGACAGACTGTAGAAtggccaatcagaattgagtattcaTTGCCAAAAACATTGTTATTTCTTAATactaatatttattataatatatctTATTCCTTTGAGGTCCACATTtgtcaaaattaaaaacacatgtaCTATTGCACAGGTTGACATATTCCTTCATTACCACGAACATGGGAACTGTAGTTCATTTTGAGTCAGTTCTGCTGCCATAAATACTCAATCCAGTTCCAAATGTGTATTCatctgcagctgaaaatagtctaCAAAGAAATGTACCATTCACTCCTATTTTAgtaatttttgttaaaaaatgacagtgcccagctgtttgaAGAAATGGCCTTGTCTTTAATGAAAGTATATATTTGTGGCTTGTTTTTAAAGACTTGAGTCTTCAGTAGTAAGCAGTGGGCTTTGAGCGTATTCAAAGACGGACTAACTTGCTGTTGATTTTGGTCTTTTTATGGGATTTggtgacaataagaaaaatataagaCTATTCTAGCCTCGTCCTTTAACGTCAGTAGTTATGGACAATGGGGAGCTACAGTTTTTGGAGACAAATAAGCTGGTACTTTTCTCAGCTGGTACATCTGATGGTGCTTTCCACAGGTTAGCTCCCACTCCACATACATACATCACAAATCTTATTCCTGGTTGGAAATATTGGGTACTCGTGaagagtttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacacatatacatactcCATTGTAACAAGCCGTTATTGAGTTTGTTGATAGAAACTCCATTGTACGTGGTTATCAGATCACAACTGCAATAGACATTGCACAACGTGTGGATTtatttacgttttttttttagcaatgtcACATTTTGTATTTTACTAATGACTTAAATACAAGCaaactgtgttgtgttgtgcgaGACTTTTTCAAACAGTGTTTTATAAAAGTGATGGAAATAGAGCTGTTCCTCATTAATCTGCAACTGATCAAAGGACAGTTGTTGCTTCCACGTCCACATAGATTTTTATTGCATTATGTCTTACTGTTATTACTGATGTATCATTAGCGCTGTTGTTTTACAGGTGAGTGCATTTTCAACCACATTGccaaaaggatgttttttttttttgtgcctcaGTATTTCAGTTAAGACACAGAGTgcaatacatat

Function

NR:

description
PREDICTED: protein FAM45A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784335.1 True 2957 mRNA 0.41 10 25605466 25610518

Neighbor

gene id symbol gene type direction distance location
fam204a fam204a,LOC102781047 coding upstream 174557 25413993 ~ 25430909 (+)
neurog3 NA coding upstream 287333 25316395 ~ 25318133 (+)
pcbd1 pcbd1,LOC106525612 coding upstream 306020 25296263 ~ 25299446 (+)
LOC120548364 sec23ip coding upstream 372954 25222425 ~ 25232512 (+)
inpp5f inpp5f coding upstream 391962 25198539 ~ 25213504 (+)
vwc2 vwc2 coding downstream 67677 25678195 ~ 25707242 (+)
LOC120548498 NA coding downstream 112091 25722609 ~ 25734715 (+)
ikzf1 ikzf1,LOC102780616 coding downstream 129607 25740125 ~ 25758318 (+)
ttl ttl coding downstream 159129 25769647 ~ 25778043 (+)
xpo1b xpo1,LOC104925896,LOC103353500,LOC102296990,LOC103154927,LOC101480205,LOC106952069,LOC103477318 coding downstream 250313 25860831 ~ 25888074 (+)
LOC120548233 NA non-coding upstream 20889 25501529 ~ 25584577 (+)
G196696 NA non-coding upstream 106186 25496668 ~ 25499280 (+)
G196690 NA non-coding upstream 171570 25427643 ~ 25433896 (+)
G196648 pdlim1 non-coding upstream 284597 25318266 ~ 25320869 (+)
G196595 mcmbp non-coding upstream 385552 25219547 ~ 25219914 (+)
G196782 NA non-coding downstream 169008 25779526 ~ 25794408 (+)
G196788 NA non-coding downstream 201697 25812215 ~ 25812441 (+)
G196841 pex13 non-coding downstream 294202 25904720 ~ 25907869 (+)
G196836 NA non-coding downstream 301243 25911761 ~ 25939959 (+)
G196898 NA non-coding downstream 379950 25990468 ~ 25992621 (+)
LOC120548229 rab11fip2 other upstream 109961 25481831 ~ 25495505 (+)
cacul1 cacul1,LOC103374658,LOC102794354 other upstream 461212 25139047 ~ 25144254 (+)
dact2 dact2,LOC103391347 other upstream 592217 25008474 ~ 25013249 (+)
G196439 wdr11 other upstream 1036299 24564550 ~ 24569167 (+)
LOC120548495 ate1 other upstream 1178964 24367954 ~ 24426502 (+)
prdx3 prdx3 other downstream 2889 25613407 ~ 25620675 (+)
LOC120548053 LOC103353497,LOC102790632,LOC102299158,LOC102194143,LOC101482614,LOC100706574 other downstream 206733 25817251 ~ 25826429 (+)
stpg4 LOC103353520,LOC101467386,LOC102793681,LOC102299197 other downstream 924766 26535284 ~ 26548760 (+)
G197053 NA other downstream 1052641 26663159 ~ 26663785 (+)
tmem254 NA other downstream 1115198 26725716 ~ 26735787 (+)

Expression


Co-expression Network