vox


Basic Information

Item Value
gene id vox
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 27886243 ~ 27887609 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784347.1
CGAGCCATTAACCCCTAATCATCGGGATCGATCAGGCGTTAACAAGGGCCTCTACATATgcaaatgggggaaaaaaaccaaaGGCCAGGGCGCTATAAAAGACGACCCTGGCCAGAGGCTGctaccacacactccctctGACATCTGCTGGATTTACAGGTCACCGAGTAGCACTGCGAACATGGTGAAATACTTTTCTGTGGACTGGCTGGCCCAGAGCCATCAGCACACCGCGCTGACCGAGGACGAACACGGAGCTGGCGTGGATACTGCGCCGACCTGCAGACCTCACATTCCCTGCATGGTGCAGCCGCGCCCGCCGGCTTTTGGCAGGGGTTACCTGCAGCCCAAACCCAAAGCATCCAAGCCCGATGAACACATGGAGCcagcggagagagagagcgggcaGGACTCCAGCCTGATGTGCTCCCCTTTCCATCCGACACGCTGCGCATCGCCAATTTCAGAAATCAGCGGCTATTCCTCCGGGTATGAGAGCGAGGCGGCTTCCTCTGAGGGAAGCGACGTGGAGAAGGACGGAGCGCAGCGCCGTGTGCGCACCAAGTTTACCCCCGAGCAGATCGGCAAGCTGGAAAAGATCTTCACCAAGCACAAATACCTGGATGCTGGAGAGAGAGTGAAGGCAGCGCAGAAACTGAAGCTCACAGAAACTCAGGTGAGGACCTGGTTCCAGAACAGGAGGATGAAGTTGAAACGGGAGGTGCAGGACTACCTTGCTCCCCACATCCAACCGCTGATGTTCCAGCCTCTGCCCCCGGTGCAGTATCACCGCGTGGCCGGACAGCGACCCCACTACCCCGCCACCGGCCGGGCCTTTTACCCGCTGCAAGTAGTCCCGCAGCTGgtgatgcagcagcagcagcagcagcagatgccCCCTCACCACCATCCTCATGTCATGATCCGCAGCCCACACTTCTACTGAAGAACTGTCAACCAGAGACTTCTCCCACTGAAACACTTAAGAGTCCAAACAAGTGCAATCCAGAGTGCTTTTATTTGAT

Function

NR:

description
homeobox protein vent1-like

GO:

id name namespace
GO:0007275 multicellular organism development biological_process
GO:0050794 regulation of cellular process biological_process
GO:0003677 DNA binding molecular_function

KEGG:

id description
K24877 VENTX; homeobox protein VENTX

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784347.1 True 1025 mRNA 0.57 3 27886243 27887609

Neighbor

gene id symbol gene type direction distance location
LOC120548504 kndc1 coding upstream 7675 27808304 ~ 27878568 (+)
valopa valop,LOC104938804,LOC106940109,LOC107093123 coding upstream 679577 27176968 ~ 27206666 (+)
LOC120547537 NA coding upstream 1012575 26865625 ~ 26873668 (+)
LOC120547700 plac9 coding upstream 1118905 26758333 ~ 26767338 (+)
mcfd2 mcfd2 coding upstream 1263673 26619417 ~ 26622570 (+)
vent NA coding downstream 3841 27891450 ~ 27900204 (+)
blnk NA coding downstream 344186 28231795 ~ 28275999 (+)
btaf1 btaf1 coding downstream 433138 28320747 ~ 28350987 (+)
march5 march5 coding downstream 524657 28412266 ~ 28447794 (+)
LOC120547570 kmo coding downstream 599914 28487523 ~ 28508440 (+)
G197158 NA non-coding upstream 516312 27369236 ~ 27369931 (+)
G197146 NA non-coding upstream 584875 27300110 ~ 27301368 (+)
G197143 NA non-coding upstream 586249 27299168 ~ 27299994 (+)
G197137 NA non-coding upstream 620735 27265279 ~ 27265508 (+)
G197089 NA non-coding upstream 743457 27142571 ~ 27142786 (+)
G197237 NA non-coding downstream 116968 28004577 ~ 28006159 (+)
G197270 NA non-coding downstream 363149 28250758 ~ 28251552 (+)
LOC120548567 NA non-coding downstream 521861 28409470 ~ 28411483 (+)
G197287 NA non-coding downstream 561971 28449580 ~ 28452009 (+)
G197299 ide,LOC104941703,LOC102291663 non-coding downstream 577537 28465146 ~ 28474917 (+)
LOC120548047 adgra1,LOC103360772 other upstream 105202 27554928 ~ 27781041 (+)
LOC120548261 LOC102312438,LOC102207415,LOC101470427 other upstream 374651 27451950 ~ 27511592 (+)
LOC120547882 inpp5a other upstream 777103 26926418 ~ 27109140 (+)
pwwp2b pwwp2b other upstream 932438 26874215 ~ 26953805 (+)
tmem254 NA other upstream 1150456 26725716 ~ 26735787 (+)
ccnj ccnj,LOC102785723 other downstream 406596 28294205 ~ 28302333 (+)
LOC120548242 ccdc85a,LOC104955469,LOC102783086,LOC102310250,LOC102209339,LOC100696856 other downstream 1225079 29112688 ~ 29177494 (+)
G197531 NA other downstream 1460816 29348425 ~ 29349928 (+)
LOC120547718 LOC102789565,LOC100690068,LOC101471749,LOC103357097 other downstream 1631332 29518941 ~ 29619016 (+)
LOC120547658 NA other downstream 2265902 30153511 ~ 30201820 (+)

Expression


Co-expression Network