LOC120548288


Basic Information

Item Value
gene id LOC120548288
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 22025958 ~ 22033229 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784426.1
agcattagcaacgTAGCTGAACGTTTAGACCTAGCTCTTCTGTCTTAGCAAAGGCCTAACGCTGTCTTTAAATGGCGAGAGGAAACATGTCAAGCCTCGACCTCTCAGTCAGTCTGTCAGTTACAGCTGAGCAGCTAATCCCTCCATGACCTCTCCGTGCTCGGAAGCTGAAAGAATAGCCCGCGGGGCTGAGCAcggaaacagaaacagacaatTTTGAGCACCTGAAGTTAGCATCCATCCAGGTAGGCTAAtttaactgtgtttttttttattatggggGAGCTGAGGTCCACGTCTCCTGGGCCTCGTTTGGACCTGACCAACTTGGACTATGTTTTAACGAGTCCCCGCTCGCTGGAGTCCTGTACACGGCTCGGTGTCAAACCCGTGGCACTTCTGATTAAATCGCTAAACGAGCTGATCGCTGAGCAGCACGGCGTGCCCTTCGGGGCGATGAGAGCTATGCACGAATCCTACGAAAAGGAGAGAATGAAGCTTTTGCAAATGTGccgagaagagagggagaggattaTCCGGGCGGCTGGCGACAGGTGGCCCGGCGGTAATAAAGCGCCACGGCCCGACACCAAACTGAAGGAGGATCACTCgagggacagacagacgacGGGGTCCGTCCCGTATGCAGATCTGTGCTTTAAAGGGACACCTGCAAGCAGGTCCTCGTGTTCTCACAGAGACCCAGAGAGGAGCACAGTCTGCAGCTTCAGTCTGGGGGACCTCAGACACACCCCAGCTACTGAGATGAAACTGGAGAGGCTCACCGAGGACGTTAAAAGGGAGGTGGGTGTCACAGTACCAGAGAGAGACCGCAAGATAGCAGCTCTCATGTTGGTGAAGCACCAGGCGGAGCAGGCTTCCCTGAAGCTCTGTCAGCGGGGGGAACAGGAGCGCCAGGAGGCCCGCAGGCAGGAGGAGGCCCAGCGGGCTCAGGCGGAGAAAACCAGGAGGAAGAAGCTGAGGCAGAGTATGCAACGCTGGCACGAGGAGCTGGAGGCCCGCCGGAGGCTGAGGGAGCGCCGGGAGACCGAGAAAGCGGGACAGCACGAGCTGGAGGTGCTGCTGCAAGAAGACCGCTGGAGGAGGATGAAAGAGGAGGTGGAGGGACAACGCAGAGGAAAGATAGAGGCCGCGCAGAGAGACGCGTGGGCTCGCAAACGCTACCAGGAGAAGCTGctgagggagaaggaggagacgGAGGAAAGGgagcgagagagggagagacaggtaGCGGCGGAGAAGGAGCAGAAGGCCATGAGGAGCAAAGGGCGGCAGGGGAAGAAGGAGAGGCAGAGGCTGCAGGAGGAAAATGGTAGAGAGCTCCTACGACACATCCTGCTGAAACACCAGGTGGAGCAACAGGTGGAGGAAGAGGGGGAGCAGATGAGGAGCAAGCTGGAGAAGAAGCTGCGACACTCGTGCGAGAAACGTGCGCAGGCTGCAGAGGCCCGGCTGAGGGAGCAGAAGGAGCGGGCAGCCCGCGAGGACGAGCAGATCCGGAGAGCGCAGCAGAGGGCCGAGCTGCAGAGCTTCCAGCagctcacacacaaaaaactccTGGTCCAGCTGAGCCAGCAGCGCATGGAGAGAGCCGCGCTGCACGCCTCGGCCCAGCAGAGGAACAGAGCTCAGCAGACCCATCGGCACAACGAACACAGGCAGCTGTGCCACCAGAGGCTGAGAGAGAGGCtacagggagaggaggaggcgaTGAGGAGGGTCAGAGAGAGCTGCGTCTTCATGAAGGACTGGAGGAGGGAGAGGCTGCGGAGACAGCGGCAGCAGGTACAGGAGGAGGCGCACAGGCTGGCCCGGGCCTCCTTTCACAtgagggagagagtgagacagcAGACGCACAGTCGGACCTTTGATCAGATGGCCCTGGAGGCTCAGCTGACTGCCTCCATGAGCCGCATCAAACTATGAAAGACGTGGTGAGCTCTGgggctgggtattgttcaaACAACTTTGATAGGGTGATatcaggtaaaatgggccatcaggtaaaatgggccatTTAAGGTTTGGGGGTCCCAGCCCCTCTGGAATTTAGAGCCAATGACTGCAAAGGATTTCAAACTGTTGTCTTAACTGTACTTGACAAGTAACAGGTGATTTTATTggtttatggttgctatggtgGGCGGGGCAATAATTCAAATCAAGACTGCACCAGAAAGCTGCATGGTAAGTAGCCTGGCATACCAAATCTAACTAAACTATTATAAGGATGAtaaatctata
>XM_039784427.1
tcCCCACATGACCACTGCCATGCCTAACGCTGTCTTTAAATGGCGAGAGGAAACATGTCAAGCCTCGACCTCTCAGTCAGTCTGTCAGTTACAGCTGAGCAGCTAATCCCTCCATGACCTCTCCGTGCTCGGAAGCTGAAAGAATAGCCCGCGGGGCTGAGCAcggaaacagaaacagacaatTTTGAGCACCTGAAGTTAGCATCCATCCAGGTAGGCTAAtttaactgtgtttttttttattatggggGAGCTGAGGTCCACGTCTCCTGGGCCTCGTTTGGACCTGACCAACTTGGACTATGTTTTAACGAGTCCCCGCTCGCTGGAGTCCTGTACACGGCTCGGTGTCAAACCCGTGGCACTTCTGATTAAATCGCTAAACGAGCTGATCGCTGAGCAGCACGGCGTGCCCTTCGGGGCGATGAGAGCTATGCACGAATCCTACGAAAAGGAGAGAATGAAGCTTTTGCAAATGTGccgagaagagagggagaggattaTCCGGGCGGCTGGCGACAGGTGGCCCGGCGGTAATAAAGCGCCACGGCCCGACACCAAACTGAAGGAGGATCACTCgagggacagacagacgacGGGGTCCGTCCCGTATGCAGATCTGTGCTTTAAAGGGACACCTGCAAGCAGGTCCTCGTGTTCTCACAGAGACCCAGAGAGGAGCACAGTCTGCAGCTTCAGTCTGGGGGACCTCAGACACACCCCAGCTACTGAGATGAAACTGGAGAGGCTCACCGAGGACGTTAAAAGGGAGGTGGGTGTCACAGTACCAGAGAGAGACCGCAAGATAGCAGCTCTCATGTTGGTGAAGCACCAGGCGGAGCAGGCTTCCCTGAAGCTCTGTCAGCGGGGGGAACAGGAGCGCCAGGAGGCCCGCAGGCAGGAGGAGGCCCAGCGGGCTCAGGCGGAGAAAACCAGGAGGAAGAAGCTGAGGCAGAGTATGCAACGCTGGCACGAGGAGCTGGAGGCCCGCCGGAGGCTGAGGGAGCGCCGGGAGACCGAGAAAGCGGGACAGCACGAGCTGGAGGTGCTGCTGCAAGAAGACCGCTGGAGGAGGATGAAAGAGGAGGTGGAGGGACAACGCAGAGGAAAGATAGAGGCCGCGCAGAGAGACGCGTGGGCTCGCAAACGCTACCAGGAGAAGCTGctgagggagaaggaggagacgGAGGAAAGGgagcgagagagggagagacaggtaGCGGCGGAGAAGGAGCAGAAGGCCATGAGGAGCAAAGGGCGGCAGGGGAAGAAGGAGAGGCAGAGGCTGCAGGAGGAAAATGGTAGAGAGCTCCTACGACACATCCTGCTGAAACACCAGGTGGAGCAACAGGTGGAGGAAGAGGGGGAGCAGATGAGGAGCAAGCTGGAGAAGAAGCTGCGACACTCGTGCGAGAAACGTGCGCAGGCTGCAGAGGCCCGGCTGAGGGAGCAGAAGGAGCGGGCAGCCCGCGAGGACGAGCAGATCCGGAGAGCGCAGCAGAGGGCCGAGCTGCAGAGCTTCCAGCagctcacacacaaaaaactccTGGTCCAGCTGAGCCAGCAGCGCATGGAGAGAGCCGCGCTGCACGCCTCGGCCCAGCAGAGGAACAGAGCTCAGCAGACCCATCGGCACAACGAACACAGGCAGCTGTGCCACCAGAGGCTGAGAGAGAGGCtacagggagaggaggaggcgaTGAGGAGGGTCAGAGAGAGCTGCGTCTTCATGAAGGACTGGAGGAGGGAGAGGCTGCGGAGACAGCGGCAGCAGGTACAGGAGGAGGCGCACAGGCTGGCCCGGGCCTCCTTTCACAtgagggagagagtgagacagcAGACGCACAGTCGGACCTTTGATCAGATGGCCCTGGAGGCTCAGCTGACTGCCTCCATGAGCCGCATCAAACTATGAAAGACGTGGTGAGCTCTGgggctgggtattgttcaaACAACTTTGATAGGGTGATatcaggtaaaatgggccatcaggtaaaatgggccatTTAAGGTTTGGGGGTCCCAGCCCCTCTGGAATTTAGAGCCAATGACTGCAAAGGATTTCAAACTGTTGTCTTAACTGTACTTGACAAGTAACAGGTGATTTTATTggtttatggttgctatggtgGGCGGGGCAATAATTCAAATCAAGACTGCACCAGAAAGCTGCATGGTAAGTAGCCTGGCATACCAAATCTAACTAAACTATTATAAGGATGAtaaatctata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784426.1 True 2265 mRNA 0.56 2 22029408 22033229
XM_039784427.1 False 2233 mRNA 0.57 2 22025958 22033229

Neighbor

gene id symbol gene type direction distance location
LOC120547713 psap,LOC104957284 coding upstream 225864 21790970 ~ 21800094 (+)
mrps6 mrps6,LOC102780815 coding upstream 237053 21787187 ~ 21788905 (+)
micu1 micu1 coding upstream 251083 21739841 ~ 21774875 (+)
pla2g12b NA coding upstream 372831 21649893 ~ 21653127 (+)
LOC120548353 NA coding upstream 379853 21639718 ~ 21646105 (+)
mrpl14 mrpl14,LOC102799944 coding downstream 37652 22070881 ~ 22072916 (+)
LOC120547561 LOC103358480,LOC103387545,LOC101064754,LOC103134145,LOC108234077,LOC106959257 coding downstream 54878 22088107 ~ 22094223 (+)
cfl1l NA coding downstream 66077 22099306 ~ 22101867 (+)
mgme1 mgme1,LOC102788050 coding downstream 97892 22131121 ~ 22133520 (+)
ephx5 ephx1,LOC103358491,LOC102206915 coding downstream 116719 22149948 ~ 22153326 (+)
G195687 NA non-coding upstream 244519 21779247 ~ 21781439 (+)
G195685 NA non-coding upstream 246882 21731052 ~ 21779076 (+)
G195679 NA non-coding upstream 354483 21667615 ~ 21671475 (+)
G195650 NA non-coding upstream 478042 21546446 ~ 21547916 (+)
G195654 NA non-coding upstream 509517 21515758 ~ 21516441 (+)
G195749 NA non-coding downstream 19302 22052531 ~ 22056793 (+)
G195757 capn11,LOC103387546 non-coding downstream 47900 22081129 ~ 22083740 (+)
G195771 snx5 non-coding downstream 92321 22125550 ~ 22126288 (+)
G195783 NA non-coding downstream 108996 22142225 ~ 22144422 (+)
G195881 NA non-coding downstream 113074 22146303 ~ 22146792 (+)
G195653 LOC102296834 other upstream 510830 21514526 ~ 21515128 (+)
fbxo11a fbxo11,LOC104951339 other upstream 693381 21318610 ~ 21332577 (+)
G195518 NA other upstream 1272149 20752773 ~ 20753809 (+)
G195448 thbs2 other upstream 1495643 20529767 ~ 20530315 (+)
adgrb3 adgrb3 other upstream 1869010 20041774 ~ 20156948 (+)
kif16bb NA other downstream 122173 22155402 ~ 22184492 (+)
tasp1 tasp1 other downstream 614685 22647914 ~ 22692604 (+)
disc1 disc1 other downstream 1529054 23562283 ~ 23611337 (+)
klhdc3 klhdc3 other downstream 1785685 23818914 ~ 23851605 (+)
LOC120547848 LOC103369904,LOC106907288,LOC107081732 other downstream 2324697 24357926 ~ 24367599 (+)

Expression


Co-expression Network