habp2


Basic Information

Item Value
gene id habp2
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 24336122 ~ 24340184 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784764.1
AAGGTTAGTGTACTTACACAAACGTTCAGACGAGTGCGAGCGTTCTGTCAGACAGTGCACTCTCATTTTACTCTCCTGGAAGTCTTCTGATCCACTGCCAGCATGAACCTTAAGCTCCTCTTCTTTGGCCTCTTCTATGCGGCACTCCTCATACCTGCTGAACTGAAACCTGATAAACCCAAAAAGCATGAACGTCATGAACATCAAGAACATCACGAACGTCATGAACATCATGATCGTCGTGAAAATCTTGATCGTCGTGAAAATCATGATCGTCGTGAAAATCAAAATCGTGAGCTTAAGGGACATGGGcatcaaaaacatgacaaaggaaggaagaaaggaagattTGAGGACATCATTTCAGACGACTTCTTTGAGATCCGAGATCCGAGTGATGATGACGACGACGACGATGACAGTCATTCAGACTGGGTTTTTGAACTTCAAGCGCTAGAAGGCAAATGCATCCCAAACCCTTGCCTCAACAATGGAGTGTGTGAGCAAAAAGGCAAGAGGGGATTCAAATGCAGTTGCCCCAAACCTTTTAAGGGAAGCAAATGCCAGAaagGCCCAAAATATTGTAGAAAAGGTCTATGCGGGCGTGGGGAATGTGTTCGGATTCCAACTGCCCCGTTCTATGAGTGCAAATGTAAGATGCCCTTCCAGCCTCCAGACTGCAGAACTTTTTCCGTGTGTCAGCCTAATCCATGTAGGAATGGTGGACAGTGCGTCAAGGATGGTAATAACTTTGACTGCAAATGCCCTCTGGGGTTCAGAGGACGTTTCTGCCATGTTGGCCCAAATGACTGCTATGTGGATGACGGAGAGTCATACCGTGGCAATGTGAGCGAGACAGATGACGGCTATGAATGCCTCCACTGGAACTCTCACTTCATCCTGGAGAACGGAGCTGATCCCTTCAAAGCCTTCCAGGACACAGATGGACTTGGCCCTCACAACTTCTGCAGAAACCCAGACGAAGACAAGATGCCCTGGTGTTTCTACAGAAGAGGCCGCAGGTTGTTGTGGGACTACTGTAATGTCACTAAGTGCCTTGAACCAACAGGTGTGGCGCCAACTAAAATTGTCCCGACAGATGCCAGTCCCACTGCTTCCAAGGCCCCACCTCCAACGCTTCAACCCACAGCATCAGCTACCCTACCTACAGAGACTGAGAAGCCCAGCCAGGCTCCACAACCTTCTACTACACCCGCTGTTCCTCTCATCCCCACCGGCACTGCTCCCTCGCAACAGTTTGCCACTTGTGGGAAGCCTCTGCCAAAAAGGCCCATTACACGAATTTTTGGGGGTCTGAAGGTCGCTCCCGGGGCTCTACCCTGGCAGGTGTCCCTGCAAATGAGACCAAAGAACTCCAACCTGCCATTCAAACACACGTGTGGAGGAGTTCTCATCAAGAGCTGCTGGGTACTGACAGCTGGACACTGCATCCTAAAAAATATGGACATGCAGGTGGTCATGGGAGATCTGTCACTGAATACGAAGGAACCCACAGAACAAACCATAAAAGTTGCAGAGGCTATTTTACATGAGAACTACAGAGAGACTCCAGCAGCTGTTTACAACGACATAGCTTTGTTGAGGTTGAGCGGCACTGATGGAGTTTGTGCCAATGAGACCCAATTTGTGAAGACAGCCTGTCTTCCTGATGTCCAACTGCCTGATGGGAAGGAGTGTAAAATTGCTGGATGGGGTGTCACTGAGGAAGCTCAGTATGGTTCCAACCACCTGCTGGATGCCAACGTGCTGCTGATCAACCAGGAAAAGTGCTCTGAACCTCATGTTTATGGCAGAATCCTGGACAATAGTATGTTCTGCGCTGGCTACCTGCAGGGAGGGGCAGATGCTTGCCAGGGTGACTCTGGAGGACCATTGACTTGTCAGGAGAACAATACCAACGTTATATATGGCCTGGTGAGTTGGGGAGACCAATGTGGACAGAAAAACAAGCCTGGGGTCTACACACAGGTCACTCACTTCCTGAACTGGATCAATACAAAGACTCAGGCAGCATCTCCATAAGCAACCTCTATTACTCAGCAACATGCCAGTGCAGCTAATAACTTGGTTATGCATGGACAACTCTTACTCATGATTTAGCTTCGGGGTTTTGTGCGGTTGTACCAGGTATTTCAATGCTACTCTATACACCCCTCCAAAAAAATCTAAACCATTTTATCAAATTGTTTTGTTGTGGAGTAAACGTGCATTGTTATTTCAGGTTCATGTGTTTTACCTGTTACATATAGCCCAAGGCAATCCAAACATTATATTAAAAAGGATGCATGTGTGGAAAAGGAAAAGACAcaataaatgttaaatgtgaCTACCCTGAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K08648 HABP2; hyaluronan binding protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784764.1 True 2359 mRNA 0.48 13 24336122 24340184

Neighbor

gene id symbol gene type direction distance location
LOC120548489 LOC101469311,LOC104948545,LOC103376395,LOC102786201,LOC102303134 coding upstream 100 24331872 ~ 24336022 (+)
ablim1a ablim1,LOC102784938,LOC102304155 coding upstream 6881 24284646 ~ 24329241 (+)
srfb srf coding upstream 68098 24248198 ~ 24268024 (+)
ptk7b ptk7 coding upstream 90281 24211972 ~ 24245841 (+)
klc1b klc4,LOC102306811 coding upstream 175519 24130784 ~ 24160603 (+)
fgfr2 fgfr2,LOC102787384 coding downstream 114684 24454868 ~ 24494403 (+)
LOC120548496 cdh23,LOC107989583 coding downstream 402742 24742926 ~ 24840747 (+)
cdh23 cdh23 coding downstream 527076 24867260 ~ 24944419 (+)
smoc2 smoc2 coding downstream 614528 24954712 ~ 24976820 (+)
lrrfip2 lrrfip2,LOC102790484,LOC103477154 coding downstream 693288 25033472 ~ 25054947 (+)
G196332 NA non-coding upstream 66070 24268273 ~ 24270052 (+)
G196337 NA non-coding upstream 171491 24164200 ~ 24164631 (+)
G196336 NA non-coding upstream 173907 24160613 ~ 24162215 (+)
G196328 NA non-coding upstream 211973 24051189 ~ 24124149 (+)
LOC120548378 NA non-coding upstream 461959 23870544 ~ 23874163 (+)
G196454 NA non-coding downstream 299230 24639414 ~ 24639857 (+)
G196457 NA non-coding downstream 300515 24640699 ~ 24642057 (+)
G196475 NA non-coding downstream 503259 24843443 ~ 24843852 (+)
G196476 NA non-coding downstream 506930 24847114 ~ 24847690 (+)
G196481 NA non-coding downstream 533618 24873802 ~ 24913468 (+)
klhdc3 klhdc3 other upstream 484517 23818914 ~ 23851605 (+)
disc1 disc1 other upstream 724785 23562283 ~ 23611337 (+)
tasp1 tasp1 other upstream 1643518 22647914 ~ 22692604 (+)
kif16bb NA other upstream 2151630 22155402 ~ 22184492 (+)
G195653 LOC102296834 other upstream 2820994 21514526 ~ 21515128 (+)
LOC120547848 LOC103369904,LOC106907288,LOC107081732 other downstream 17742 24357926 ~ 24367599 (+)
LOC120548495 ate1 other downstream 27770 24367954 ~ 24426502 (+)
G196439 wdr11 other downstream 224366 24564550 ~ 24569167 (+)
dact2 dact2,LOC103391347 other downstream 668290 25008474 ~ 25013249 (+)
cacul1 cacul1,LOC103374658,LOC102794354 other downstream 798863 25139047 ~ 25144254 (+)

Expression


Co-expression Network