ptk7b (ptk7)


Basic Information

Item Value
gene id ptk7b
gene name ptk7
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 24211972 ~ 24245841 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784768.1
ATGGACAGTGTGCCGGCGTTGCTCTACTGTATTCTGTCTATCCAGGCTGCTGCCATCCAGTTCACCAAGGAGCCCAAGTCCCAGGATGCCTTGCACGGCCGCAGCGCCATGCTACGCTGCGAGGTCAGCGATCCGGCTGACATCAGTTACGGCTGGCTCCACAACGGCCAGCCCCTGGAAAACAGCGAGAGGCGCTTCCAGGAGGGCAGCAACCTCAAGTTCACCGCTGTGGATCGGCAGCTGGACGCAGGAAACTTTGAGTGCGTCGCACAAAACACGGCCACCGGAGAGGCGCTCCACTCCTACAATGCCTCCTTCAATATTAAGTGGTTAGAAAGTGGTGGTGTGACTTTGAAGGAGCCCGCCTCAGAAGGGGAGATCGAGAGCTCTGCGCCGGTCACGTTGCGCTGTCATATTGATGGACACCCACGGCCGACATGCCAGTGGTTCAAGGACGGGGTGAAGCTGACAGAGAAGAGCCATCAGATCAACAACAAGGAGAGGACGCTCACCTTTAACAGTGCCAGTCCGGACGACAATGGCTTGTACTACTGCTGTGCCAAGAATGCAGCGGGGCACGTTTGCAGCAACAGCAACTTCACCCTCAACATTATAGATAAGAGTTTCCCGCGGCCGGTGGTCACTCCTGAGGACCAGGTGGTGTTGAGGAACGAGGAGGCCGCGTTCCACTGCCAGTTCACCGCAGAGCCGGCCCCCACGTTGGAGTGGTACCACGAAAACGAGCTGCTGGCAAACAAGTCTCGTCTGATCCTGTTATCCAACGGCACGCTGCTGATCACCCAGGTCAAGCCCAGGAGCACAGGGACCTACAAGTGTGTTGGCCGCGGCCTCCGAGGCTCCCATGTTACACTGGAGGCCTCCCTCCTCATagctgAGATAGACGACATGGTGCCCAAGATGTCGAAGGTTTTCACATCAGACACCCTGCAGCGGGTGGCCTGTCGTCCCCCACGCGGCAGACCTGAGCCCGAGGTCTGGTGGGAGAAAGGAGGTCAGCGGGTGTCCACGGAGGGCAGAGTGTATCAGGATGGCCTGGATCTGGTCTTCAGTCCCACAGAGGAAGGAGACTCGGGCACCTACACCTGCGTGGCCCAGAACAGGGCTGGACGCAAGACGCAGGAGGTCACCTTCACCGTTGCCActgccccagtgtgGGTGACGAGGCCTCAGGACAGCCACCTAGAGGAGGGGAAACCAGGTTACCTTCACTGTCACGCTCAGGCCAACCCTGAACCTGAGGTCACCTGGCTCCGCAACAACATCATGATCACGACCGAGGACTCTCGTTTTAAGGTATTCCCTAACGGCACCCTCAGGATCAACAATGTGGAGGTGTACGACAGCCAGATGTACGGCTGTGAAACCAAGACTGTAGGCGGCCGACTGTCTGGGCAAGCTCGAGTTATTGTGCTTGAGAAGCTGAAGTTCACCCCGACCCCCCAGCCTTCTCAGTGCCTAGAGCTGGATAACGAGATCACCATCCAGTGCTCAGCTAAAGGCCGAGAGAGCCCAACCATCCGCTGGACCAAAGCAGACGGAGGAGAGCTGCCACCTCGGGTGGAGCAGAAGAACGGCCAGCTCCACTTCAGCAAAGTCACCCGCAGCGACGCAAACAACTACACCTGCATCGCCTCCAACAGCCTCCAGGGGGAGATCAGAGCCCTGGTGGCCCTCATAGTGGCCGTGTACATTCGCTTTAAGGTGGAACCAGAAAATACAACGGTGTACCAAGGTCACACAGCCATCCTGCACTGTCAGGCCACCGGCGACCCCGAGCCTCACATCCACTGGATGGTCAAAGACAAGACGCTGGACATCAGTAAGAACAGGAGGTTCCAGAAGATGCCCAATGGCTCCTTGGTGATTACAGATGTTACTACAGATGACACGGGCAGATACACATGTGTGGCCGGAAACAGTTGCAGCATCAAAGACCGTGTGGCTCAGCTGTATGTAGTGGACAAACCGAATCATTCCTTTGAAGAAGATGAGGACAAGGCTCCCTACAAGATGATCCAAACCATCGGCCTGTCAGTGGGGGCAGCCGTGGCTTATATCATCGTAGTGCTGGGACTCATGTTCTACTGCAAGAAGAGACGCCACGACAAAAGACTGCAGAAAGGCCAGGACGGAGAAGAGCCGGAGATGGAGTGTCTCAACGGAGGCGCTGTTCAACAAAATGGCCACACCACCGCCGAGATCCAGGAAGAGGTGGCACTCACCAACATGGGTACCATGGCAACAACCGAGAAACGCCACAGCCATGTCAACAACGATAAGCTCCACTTTCCTCGAGCAAACCTACAAACCATCACTACTTTGGGCAAAGGGGAGTTTGGTGAGGTGCTGCTCTGCAAAGCTAAGGGTATCGAGGAGAGCGAGGAGGAGATGGTGGTGTTGGTGAAGAGCCTGCAGACCAGAGATGAACAGCTCCAGCTCGACTTCCGCCGTGAGGCTGAAATGTTCGCCAAGCTCAGCCACCCCAACGTTGTCCGCCTGCTGGGCCTGTGTAGGGAGGCCGAGCCCCACTACATGATCCTGGAGTACTATGACCTGGGAGACCTAAAGCAGTTCCTGAGAATTTCCAAAAGCAAAGATGACAAGGTCAAATCTCAGCCTATCAGCACCAAGACCAAAGTTTCCATCTGTGCCCAGGTGGCTCATGGGATGGAGCACCTGTCCAATCACCGCTTTGTTCACAAAGACCTGGCCGCCCGAAACTGCCTGATCAACAGTGAGAGGCGCATTAAAGTGTCGTCGCTCAGCCTCAGCAAGGACGTCTACAACAGTGAGTACTACCACTACAGACAGGCATGGATCCCGCTGCGCTGGCTCCCAGCAGAGTCTGTGTTCGAAGACGACCAGTCCACCAAGTCTGACGTGTGGGCCTTTGGAGTGTTGATGTGGGAAGTGTTCAGTCACGGGGAAATGCCATATACCAAACTCAGCGATGACGAGGTGCTGGAAGGTCTGCAGACAGGGAAGCTGAAGCTGCCCGTTCCAGACGGATGCCCCACCAAAATCTACAAGCTCATGGTCCGCTGCTGGGCGCTGAGCCTCAAAGAGCGCCCCTCCTTCACTGAAATCGTCCACACCCTGGGAGAGCTGCCCTCTGACAGTAAAGTCTGAGACGACCATAACCCCACATCAGAGGGGAACTTTGaccaaccccctccccccccaaaaaataaagacaGGAATGCTGGATTATTAGTCTCACACATTTCAGGGAAGAGGGTTGAGgagaaaacacttttttttttttaaatatgcatttcaaACCGTGGGATGTGTGGATAAGACTCCTTTGCTATATCAGTGGAAACGCAATCAACGTTTGTATAAATTGCTTCCTGTGAGCAGTGCCAGGAGTTTACGTTTGCCTTAACCGCAGcatggatgaccctcccctcgaGTTCCCTGTCTGTGGTTCCACTGTgactctgcctgcctgtctgcggCCGCTCTGTCCCAGAGACACTTTGTTTTCACGGAGTCTCACAACCTCAGTGCCTCTACCCCTCCACACAaacgcgcacacaaacacacacacacacgcgctcaCACTAACCTCCGACTGCTTTGTAGTATGTTACAGTGGTCTCACTGGCTCAGATCAATAGAAAGTATTGGTCGGAAGCTTAGGAAAACCCCCTGAAATTTAGATCCGCTGCTCTGTCAAGTCTGAAAGAATATTGAAGGGAAAGTGGGACACAATGTGACTTCAGTGGAGCATTGAAGCTTCAGCCACTTCGGAGTGTGTTGAGTGACACCGTTTCAGCTGGCCTGCTTGGATTTAAAATCCAATCAGCTGCATCATGAGTCCGCCACCTGAATCCTGTTGGAGACGACTAGCTACACACCAACatcctcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcctctgaaCTGTTCCCATGCTGCGGTGTACATTCAAAGAAGAAGTGGAATAGGGTTTGCATGAAGGTTCGTCGTCCGTTATGCTCGTGATTTGCGTTTTGAGAAAACGTGTGGAATAAGCGATCGGTGTTATGGTAACACTTCAGgaacatggaaaaaaaagatcatAGCCAATGAAATATATTGAATAGATGAGATTGCGCCAGTGTGGGCTTTGTACGTTTTTATGAGTGTGTTCTGTTCTTGTATTAACTTTGAGGTGCTTTTTATTGGTCACGACCAATGGGTAAGAACCCCCATTATTATCACATCAACATTATCGTGTTGCAGGCATGTTGCAGCCATTCACTGTGTTTAACCTGCAACATCATTGCTCCAGAGGTCCAATCACAGTCTCCCCTTCCGGGTCCAGTTCTTTTGTGCAATGCTCCAAAGTGGACCGTCACACCAGGCAATGTGTAAATAATGTAGAAGCCATGCACTAACTTCACTTAAAAAAGAATATCCCTCTTTATCTCTCTATCATGTTGTGTAGTAGGACATGCAGGTGCCTGTTTATTTATGATGAAGgtcctgtctttttttttttttttaaactatgttTAGAACAGAAAGGTACTTCTCTGATgctatgttttcattttcacgGTGTGAGAATCTCAACATCTCAATGTGCGTTCAGTCTGGTAACCATCTGAATATGTTAACACAAAGTACAAAAGAGGTCAAAAAAGAGTGACTGCTGGTCACCAGTACTCATTTAAGTGCCTGGTAAATGAAGGATTATCTTATCTGTTttccctctcgctctctttttttttttttttttttttacattatctaATCAAATGCAATGGCCTTTGTTTATGAACTTGTTTTTATACGTTGTTTTTAgtgtaatgttgtttttatgaaTGCTAGGCACTCACACCTAGACCTCCTTTTTTAATCTGCTTCAGCAAGTGTTCACAGTAATCACAGATATATACAAAAGTATACATGCTGCTGTCAATAAAAGGTTCAGTGTTTTTACCCAA

Function

symbol description
ptk7 Predicted to enable cell adhesion molecule binding activity. Involved in several processes, including actin cytoskeleton reorganization; cellular response to retinoic acid; and positive regulation of canonical Wnt signaling pathway. Located in cell-cell junction.

NR:

description
PREDICTED: inactive tyrosine-protein kinase 7

GO:

id name namespace
GO:0018108 peptidyl-tyrosine phosphorylation biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0004713 protein tyrosine kinase activity molecular_function

KEGG:

id description
K05127 PTK7, CCK4; PTK7 protein tyrosine kinase 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784768.1 True 5099 mRNA 0.51 20 24211972 24245841

Neighbor

gene id symbol gene type direction distance location
klc1b klc4,LOC102306811 coding upstream 51369 24130784 ~ 24160603 (+)
zmp:0000000755 LOC100695905,LOC101469954,LOC102307746,LOC103371009 coding upstream 89897 24062755 ~ 24122075 (+)
npas4l LOC101471891 coding upstream 351105 23855715 ~ 23860867 (+)
ntpcr ntpcr,LOC103137650 coding upstream 441552 23766603 ~ 23770420 (+)
map10 NA coding upstream 446590 23762408 ~ 23765382 (+)
srfb srf coding downstream 2357 24248198 ~ 24268024 (+)
ablim1a ablim1,LOC102784938,LOC102304155 coding downstream 38805 24284646 ~ 24329241 (+)
LOC120548489 LOC101469311,LOC104948545,LOC103376395,LOC102786201,LOC102303134 coding downstream 86031 24331872 ~ 24336022 (+)
habp2 NA coding downstream 90281 24336122 ~ 24340184 (+)
fgfr2 fgfr2,LOC102787384 coding downstream 209027 24454868 ~ 24494403 (+)
G196337 NA non-coding upstream 47341 24164200 ~ 24164631 (+)
G196336 NA non-coding upstream 49757 24160613 ~ 24162215 (+)
G196328 NA non-coding upstream 87823 24051189 ~ 24124149 (+)
LOC120548378 NA non-coding upstream 337809 23870544 ~ 23874163 (+)
G196195 NA non-coding upstream 668134 23543607 ~ 23543838 (+)
G196332 NA non-coding downstream 22432 24268273 ~ 24270052 (+)
G196454 NA non-coding downstream 393573 24639414 ~ 24639857 (+)
G196457 NA non-coding downstream 394858 24640699 ~ 24642057 (+)
G196475 NA non-coding downstream 597602 24843443 ~ 24843852 (+)
G196476 NA non-coding downstream 601273 24847114 ~ 24847690 (+)
klhdc3 klhdc3 other upstream 360367 23818914 ~ 23851605 (+)
disc1 disc1 other upstream 600635 23562283 ~ 23611337 (+)
tasp1 tasp1 other upstream 1519368 22647914 ~ 22692604 (+)
kif16bb NA other upstream 2027480 22155402 ~ 22184492 (+)
G195653 LOC102296834 other upstream 2696844 21514526 ~ 21515128 (+)
LOC120547848 LOC103369904,LOC106907288,LOC107081732 other downstream 112085 24357926 ~ 24367599 (+)
LOC120548495 ate1 other downstream 122113 24367954 ~ 24426502 (+)
G196439 wdr11 other downstream 318709 24564550 ~ 24569167 (+)
dact2 dact2,LOC103391347 other downstream 762633 25008474 ~ 25013249 (+)
cacul1 cacul1,LOC103374658,LOC102794354 other downstream 893206 25139047 ~ 25144254 (+)

Expression


Co-expression Network