LOC120548498


Basic Information

Item Value
gene id LOC120548498
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 25722609 ~ 25734715 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784775.1
ATGACAGCAGTTTTGGATCCCTCCAAGCCGTTCTCTGCAGAGCTGCATGTCATCAGACGGCTGAACTTCAGTCTGTACGGGGCTGGTGGTAGAGATGGACTGGAACCTGGACGTGCAAACTCTCCATTTTCTAGATGTCCCCCCCTTGCTGAGCATGTCAACCTGGCTCCTTTACGAGTCGACGTCCCCCTGCTGGATCCTTGCTGCGGTCAGCTGAGCGCCGGAGCCGAGGTGAACCTGGGGGTCGAAGGTCGACAACAATTCATAGATTTCCAGCATGTGGCCTCTGCTCTGTGGGTGCCTCCAGGTTTCAGAGAAAGgccacaaactgctccaaacccCGCTGGTATCTGTGTAGACCTGAGCGAAGACAAGGCCTGGAACTCCAGGAGGATCCCTGATGCAGGATTGAGAGCAAGACTCAGTGGTTCAACCAATCCTGTTAAAGTTCAACCACGCTCACTGAGGACGTCAATGAAAGCACCATCAGACAGCAGATTTACTGGACCTCAGGATGGCTTCTCTTCTGATCTGAAGCTGTGGACAGACAACTCACCGGCAGTTCAACGCTTCAGATACACATCTGCAACACAGAGGAGTTATGAGGAAGTCGGTTGGGATACTAAGTTACCCCGGCGCTTAAAGGCACCAGAGACAACCCTGGAGAAAATGGCGGACCCAGTGAGTGAGCGTCTCTCATCGAGGCGCTACAGTTGTCGACCTCAGCTGTGGCAGTCTATTGGAGCTGAGTGGAACAGGCAGCAGCTTCGATCGAGGAGTGATGCCAGGAAACCCATATCATTCTGCAGTGGATGTCCGAGGTCAGGACAAATCCCTCTGTACACTGGTACGATCGGCTCTGAGAACATGCAGAACATTGACAACATGGATGAAGACTTTCACCCACTGACCCTGAAGAGGAGCACCGTGCCCCCTTACGTCCCTACAGCACGCCGAAACACCATCCCCGGATATACAGGCAGGGCTGTTTATGCTAACTGTGCTGCTGATGCTGCAGTGTCTGTCCCAGCTGTCTCCGGTTCTGCACGCTCCTCTGGGACAATCAAGGAATCCGGGAGTCCAACGTTTGGCCGTGCAGCGCCCCTGTCTCGAATGGTGACTAGCGTGACCCCCGGCAACCCCTTCCTGAGACCTGCGCCTCCTGTCACCCACAAACACGCCAGGAGGCATTAGACAAAGCAGATGAGAAAGTTTTGAAGGTGTCAGCTTCCTTTTTATGCCATCCAATCTGTTTATATGAATACGTCTATAATGATGTGATGTCAGTGACTGATTCGGAGGGAGTTGGAGAATAATGAGATGCCCCATTATCATAATTTCCCTGATTTAGATGAGTGGTTTTCGAACTCTGGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784775.1 True 1376 mRNA 0.53 9 25722609 25734715

Neighbor

gene id symbol gene type direction distance location
vwc2 vwc2 coding upstream 15367 25678195 ~ 25707242 (+)
dennd10 fam45a coding upstream 112091 25605466 ~ 25610518 (+)
fam204a fam204a,LOC102781047 coding upstream 291700 25413993 ~ 25430909 (+)
neurog3 NA coding upstream 404476 25316395 ~ 25318133 (+)
pcbd1 pcbd1,LOC106525612 coding upstream 423163 25296263 ~ 25299446 (+)
ikzf1 ikzf1,LOC102780616 coding downstream 5410 25740125 ~ 25758318 (+)
ttl ttl coding downstream 34932 25769647 ~ 25778043 (+)
xpo1b xpo1,LOC104925896,LOC103353500,LOC102296990,LOC103154927,LOC101480205,LOC106952069,LOC103477318 coding downstream 126116 25860831 ~ 25888074 (+)
haao haao coding downstream 227640 25962355 ~ 25969516 (+)
hcar1-3 NA coding downstream 242742 25977457 ~ 25980437 (+)
LOC120548233 NA non-coding upstream 138032 25501529 ~ 25584577 (+)
G196696 NA non-coding upstream 223329 25496668 ~ 25499280 (+)
G196690 NA non-coding upstream 288713 25427643 ~ 25433896 (+)
G196648 pdlim1 non-coding upstream 401740 25318266 ~ 25320869 (+)
G196595 mcmbp non-coding upstream 502695 25219547 ~ 25219914 (+)
G196782 NA non-coding downstream 44811 25779526 ~ 25794408 (+)
G196788 NA non-coding downstream 77500 25812215 ~ 25812441 (+)
G196841 pex13 non-coding downstream 170005 25904720 ~ 25907869 (+)
G196836 NA non-coding downstream 177046 25911761 ~ 25939959 (+)
G196898 NA non-coding downstream 255753 25990468 ~ 25992621 (+)
zgc:110045 LOC102779765,LOC102305383,LOC100704767,LOC101482925,LOC102197868 other upstream 47703 25594496 ~ 25674906 (+)
prdx3 prdx3 other upstream 101934 25613407 ~ 25620675 (+)
LOC120548229 rab11fip2 other upstream 227104 25481831 ~ 25495505 (+)
cacul1 cacul1,LOC103374658,LOC102794354 other upstream 578355 25139047 ~ 25144254 (+)
dact2 dact2,LOC103391347 other upstream 709360 25008474 ~ 25013249 (+)
LOC120548053 LOC103353497,LOC102790632,LOC102299158,LOC102194143,LOC101482614,LOC100706574 other downstream 82536 25817251 ~ 25826429 (+)
stpg4 LOC103353520,LOC101467386,LOC102793681,LOC102299197 other downstream 800569 26535284 ~ 26548760 (+)
G197053 NA other downstream 928444 26663159 ~ 26663785 (+)
tmem254 NA other downstream 991001 26725716 ~ 26735787 (+)
pwwp2b pwwp2b other downstream 1139500 26874215 ~ 26953805 (+)

Expression


Co-expression Network