LOC120548504 (kndc1)


Basic Information

Item Value
gene id LOC120548504
gene name kndc1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 27808304 ~ 27878568 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784780.1
CGGAGGCGTGGATCCAACTGTAGCATGCAGGCAGCAGGCGGCAGCAGGCAGCGGCACTCTCCACGCTGCCAACACCGGCTCCTCCGCTCCgctgggaggggaggaggattCACAAAACTGCAGCAATCGCCTTCGGTGTGTCGCCTGTTCCCGTGGAGGTGCAGTAGTAATGCAGCCTCAAAAACACGGGCCAGCCCCCACCCCACACCCCCTCACTCCCGCCTCCTCCTGCCCCGGCtcgctgtgtagactgtagacGGTCGACTTCAGTCGCATTGTCGGCGTTGTTTCTGGACTGTTGTGTCCCGCAGTGACCATCGACTGACTGCAGCAAGTAGTCAACCCCCGTTCGTGCCCAGTGGAGCCCAGAGAGCTCAGGCATGCCATCTGTCTCGACTGGAAACATTGTTGCATGGACCGACAGTCGCTTTACTACTTGAGGGGAGCCAAAGTTGCTGCAATGGAGACTTCTGGGAGTGATGCAGCGGTCACATACTTGGGGAAAGCTGAGGAAAGAGACGGATACTATGACCTGGAGCACCTGCCTCCACTGCTGGAGGATGAGGAGAATGTGTCTCTGGCAGACATTCTGTCTTTGCGGGACAGCTGTCTGTCTGAGGAGGAGGTGTGGGCGGTGTGTGCAGAGTGCGTCCTGGCGCTGCAGAGTATCCGACCCTCCCACCTCTTTCACACGCTGTGCATAACACCAGACACCCTGGCCTTCAACGCCCATGGGAATGTTTGCTTCATGGAGCAGCTGAGTGATGATCCAGAAGGCTCCTTCGTGCCTCCTGAATTGGACACCACAGGCAGCACGTTTGAGGGCCATGTTTACTCTCTGGGCTCGACGCTTTCTGCCGCACTGAGCTTTGTCATCGAGCCAGAGCTGGAGGCGGAGCTGGGGGAAGAGATCCAGAGGCTGTTGGAGCAGATGCAGGAGGAGAAGCCCGAGAGCAGGCCCCTCCTACAGGACATCCTGTCTCTGGCTGAAGCAAGGCTGTCTCATACCTCCTCTGCAGCTGTGTGCCGAAAACTGTCCTCCATTGGGCGTCGGGTGCTCTCCATCGAATCCGTGTCAACCTTTCAAGATGGACAGGAAGGCTCCTGGGAGGCAAGATGGCAGCATCCCAAACCCAGATGTCTGCTTACAAGACTGAGCTCGGATGATAATACCAAAGACCTGTGTGTTGACACTTCTGTTAAAGCAAATGGTCTGTCTAGGCAGCAGGTGTGCGGCGGCTGGGACTCCTCTCTCTGGGCGGAGGATATGGACAGCGGTGAAGGAGACGACCGGATCTTGGCAGATGAGTTGGACTGCAGGTCCCACAACAGCTCCCCAGTGAGGAGGAGAGCCCAGCAGAGGCTGAACAGAGTGAGGGGGGCTCTGAACCGCTCCTGCTCTGTCCCAGACTCCAACAACCCCCCTTGTCTTTCCCCTCAAACTCACGGAGATATCAGTATACCCAACCTATTAGCCTATCTATGCCTGGACACACTGCATGTGGGCTGCGAGGGAGAAGTACTTTTCCTGAAACCTAAAAACATTGGATCCCGAGATGAGTTTTTTCTCGCTCCTGAATATCAAGAACATGGAATTGTGACTGAGAAGGTTTGTGTGTATGGCGTTGCTGCTATTCTCTTGAGGCtaaaaacaaattttaaaaaataaaaaaaaaagcaccccCAAAGCAAGTTTTCCCAAAGCGCCAAGTTTTTGAAAAGACTGCTCCTGGAGATGGCAAAGAGGATGCCCATTGAGAGACCTACCATCATCATGGCTAAAAAAAGCTGTCGTGACTACTTATCTTGTCAAGGGACAAATGCCGAGACTGTGTGGAACAATCTCATCAGCAGAGTTCACCCGCCAGCCGCAAAATCCAGTGATGCAGACGATTTGAGTGCGCCTGAAACTTTACAGAGCTCATTTGAAGACTCTGCGCTAAACAGTGGCTTTGTGCCCATGGCCACTGAGAGCCGACTGGCTCCTGTGCCTGGCCCTGTTCCCCACAGCTATCCAGTCAACAAGGAACTCCAACTCCCAGAAGCCTTCACCTCCACTGCCACACACTTCACCCCCATCATCCTGACCAATGAAGgggactcagaggaggagatccGACACCTTGGAGCTGCCATTGAAGGGACTGTGGATGGATTTACAAAAAGCAGTGAACACATCGAGGAACGGGGCCTCGATTTCCCTTCCCACTCTGAGTACTCGTATCCGACACATACTGAACCCACTCTACGTACACAAGAGTCGCCTGTTAATCAAGAAACCACAACATCCAGCAACAAGATGCCGGCCAACTCTACTTCTACTCTCACTGATATTTCATGTCTTGACTCTCTTCCTCTGCCATTATCCACTAACATCAGTGGTTGTGGTGTTTTCAACAATTACATCTTCCGTCAGGATCCCACAACAGGAGATCTTTCCTTAGTGCCTGTGCAGGTTAGGGCTCCAGAGTCTCTCCTCGGGTTGAATATCAATCTCTCCCTGGTGCCACAGCCTCTACAGGGACTAATCAAAGTTCCAGAGAGCACTGATGGTGATGGTCCATTCATTAACTGTCTGAATGGGCCTTTGAGGCCTGGACCCTATGATTATCACCCACAGTCATCTAATTTCAGTGGTAGCTCCATCATTTCTGACCGCCCCCTGGAGCACAGTGTACCCAGAGCTtacaatggaaaaacaaatccGGGAGCTCGGGCTGAGAAGCAGTCTTCTTCAGAGTCCACCCCCCCTAAAGTCCACCCCGCCCTACAGGAGGTGATTGACCTGCTCAAAGGAGAGTTTTCACTTGATGCGTGTTTGGACAATGGACATGAGGACATTGCCATGGGGGAGTACATCTTCTCTTTGAAGGACCTCCAGAACCACACGTTTGCCAGTGTTGTGAAGGAGAGGTTCAGTGATCTGTACTGGGAAGACGACTTGCTAGGTGTATTGCACTGCCTGGTCAACTACAGCCCATCAACACTCGGCTCTAATGAGCACCCTCTATCAAAGGCTGTGAAAAGGGCAGCCCTTACCCCACCCCTGATAGCCACCGTCTGGGGAGGGAAGAGAGAAGTTTGCCTGCATGGTTGTCTCGACCTGAATGGAAACATTAACACATCCAGTCCCGCTGCTGCTGTGGATTGTTGGGAAGGAACCGAGGCCCAGCCCTGTCACGGAGAAAATGAGGCTGCGCTTGAAGCTCTTGAATTAAGAACGGAGGAGAGTCAACAGTGCATCTGTCAAGGTGTGAGCACGGACAGTTGGGACACGGGGGTCATGGAGGGAGGAGATCATTCAGCGGGGGGCAGCGATGAAAGCCCCTCTGAAGCTGAGTTTCTGTCGGTGAGAGAGGAAGGGCTGCCGGGGGCCCACGAGGAGCAGATGAGCCCCGACTGCTCCGAGGACATGGAGGACAGTGACTCTCTGGTGTCGGAGCGACTCCTCTCGCCCGGATCCAGAGCAGAGGGACTGGGACTCGGCTTCAGCCCGGCCTGGTCCTTGGCCTTCTTTGGAGAAGACTGTTTCAGTCTGGAGGTGATCCAGTACGCGGTGAATCTGGGGCAGCACACAGGATCCCCACGTCTGGATGTGAAAACACAGgaactgcagcagcagctgatgATTGAAACAAGGAATCTAAAGAAAACGAGAAAGTTCTATCAGAAGCTGTTTCAACAGGAGATAAAAAACAAAGGTTCTGACAACAAACTGATGCTGTCCAAACTCACGTCCCAGTTTGAGGAACTTCGGTCCAAAGTGGTCTTCTTGGATTGTGTGAAGAAATACCTTGAGATTCTGAGTGTGGACCAGTGGGGTTTGGAGGTTTCATTGCTGCCGTCTTTGGCTGTCTGTGGACCTGGCTCTCTGGACATCCAGTCCTCTGAGGACCCGTCTGTTATGAGCTTTGGTACCAGCAAAGGGAAGAGCACTCTGCTAGCTGGGTCTCCTCTGGGCCTCATGGCTTACCTCTACGCCAGAAATGCAGCTGTGGAGGGCTACATCCAGCAGTTCCTGTACACCTATCGTTTCCTCTGCACTCCTGAGAAGTTACTGCAGTTCATAACTGATAAATTCATCGGTGCTGCAAGACAGGGTCCAGACATGTCAGGAGACAGTGAAAAGATCTTCCATCGCAGTCTGGACCTGCTCCACATCTGGATAACAGAGTGTAAACGGGTGGACTTCACCCCCCAGAGGAAGTCCAGCCTGGTGGAAACGTTAGAAAACTTCCTTAATGCTGAGGTGATTCCTGTAGACAGCCGAGGGGAGGCCCTTCTCGCTGCTCTCCACAGCCCTCCTTCAACGACTTTGATCCAAGGAAGAGGAAGCCTAATCAGCTTTGAGGAAGATGATGATTCTACGGGTGTGCATTCATCTACTGAGGATCTTGGGAGAAAGTGGAGGTTCTCGAGAGTGGTGGAGCCGTCTGCATCCCTGCCTAAAGACAAGACCTTCTCCATCGCCACGGCGCTGCCTATGCCTTTCTACGGCTCCCTGGTGGCGGGCCTCTCCAACGTCTGCCTGCACAGTGAGGAGCCGCTCCCCTTCAGCCAGAACGAATACAGCGCACAGCACATCAGCCAGCAGCTCACCCTGCTgcagcagGAAATGTTCCAAGGATGTCATCCAGTTCATTTCCTCAACTCCAGAATACAAGGAGTCAGGGACAAAGTGTCGACCCCAAACAGGAACGTGTCCCAGCATATCCCGCCAGCAGAGGGCAGCGCTCCGCCTCTATGTGAGGACGGAGTCCTCCGGCGGCTGCTCACACACGCTGACAGTGTTTCTAACTGGATCTCGGCTGAAATAGTCATCTGTGACTCGGTTAAGACACAAGTTGCATTGCTGACCAAGTATCTGTGGATAGGAAAACACTGCTACGAATCAAGGAACTTTGCCACAGCCATGCAGGTCCTCGGAGGTCTGGAGAACGTGATTGTCAGGCAGTTACCAGCTTGGAAACAGCTGTCTTCCAAGGTGTGTGAGATCCTGGAGGAGCTGCGAgctgtgcagGTGTTTCTGAAGAGTGACGACCTCTGTCTGATGGGGGGGGAACCCAGGAGGAGGAGGCCCACCCTGCCGTCGGTGCGCATCCTGGCCATGCACGTCCAGAAGCTGGAGATCGGAGCCTTCACGCTCACCACCGGAGCTTACAAGTGGCCCAAGCTCAGGAGCATAGCAAAGGTTGTGAGTCAGGTCCACGCCCTTCAGGAGGCTGCGTACCCCTACAGCCCGGACCGGGAGCTGCAGGCCTACCTTCGGCGCCGCATCGCCCGGCTCGCCACCTCTGACATCCACCTATTGGCCGCCGACAACGATGCCAACTTCCAGCAGTCCAGCGAGCGACAGACACGGAGGATCCAGGACACGCTGAAGAGGGTTAGGGCCACTTTCCAATGAGTCCTGCCCCCCCCGGTCACATCTAACAGCCCAGAGCGAGTCACCTCCACCAGGCCAACGCCTGATGTCCAAGCCCAGACTGAGGCTCCATGCCCATGCCACGACCCTCGCATGTCTCTGTTGTCCAGACAGCAGAGCCTTGCGGACTGGAAAGCTTTTTCTGCTGTCATATGTTCACTATCCGCAAAGGCCCCTTAATCTAAAGTAACTAatatatatgtaacttttaaatgttgctGAAACTGTATAATTTTCCATGTGATGATCTTAATCTGagctgtaacagcaaacgagactaacagtgaaatgAACGCTagttttctatattttttattaatgcctctgccccggtccgatttttcccgcaaagtcca

Function

symbol description
kndc1 Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in cerebellar granule cell differentiation; positive regulation of protein phosphorylation; and regulation of dendrite morphogenesis. Predicted to be located in dendrite and neuronal cell body. Predicted to be part of guanyl-nucleotide exchange factor complex.

NR:

description
PREDICTED: protein very KIND

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784780.1 True 5781 mRNA 0.54 30 27808304 27878568

Neighbor

gene id symbol gene type direction distance location
valopa valop,LOC104938804,LOC106940109,LOC107093123 coding upstream 601638 27176968 ~ 27206666 (+)
LOC120547537 NA coding upstream 934636 26865625 ~ 26873668 (+)
LOC120547700 plac9 coding upstream 1040966 26758333 ~ 26767338 (+)
mcfd2 mcfd2 coding upstream 1185734 26619417 ~ 26622570 (+)
calm2a calm1,LOC102778633,LOC102293206,LOC107396020 coding upstream 1276578 26527783 ~ 26531726 (+)
vox NA coding downstream 7675 27886243 ~ 27887609 (+)
vent NA coding downstream 12882 27891450 ~ 27900204 (+)
blnk NA coding downstream 353227 28231795 ~ 28275999 (+)
btaf1 btaf1 coding downstream 442179 28320747 ~ 28350987 (+)
march5 march5 coding downstream 533698 28412266 ~ 28447794 (+)
G197158 NA non-coding upstream 438373 27369236 ~ 27369931 (+)
G197146 NA non-coding upstream 506936 27300110 ~ 27301368 (+)
G197143 NA non-coding upstream 508310 27299168 ~ 27299994 (+)
G197137 NA non-coding upstream 542796 27265279 ~ 27265508 (+)
G197089 NA non-coding upstream 665518 27142571 ~ 27142786 (+)
G197237 NA non-coding downstream 126009 28004577 ~ 28006159 (+)
G197270 NA non-coding downstream 372190 28250758 ~ 28251552 (+)
LOC120548567 NA non-coding downstream 530902 28409470 ~ 28411483 (+)
G197287 NA non-coding downstream 571012 28449580 ~ 28452009 (+)
G197299 ide,LOC104941703,LOC102291663 non-coding downstream 586578 28465146 ~ 28474917 (+)
LOC120548047 adgra1,LOC103360772 other upstream 27263 27554928 ~ 27781041 (+)
LOC120548261 LOC102312438,LOC102207415,LOC101470427 other upstream 296712 27451950 ~ 27511592 (+)
LOC120547882 inpp5a other upstream 699164 26926418 ~ 27109140 (+)
pwwp2b pwwp2b other upstream 854499 26874215 ~ 26953805 (+)
tmem254 NA other upstream 1072517 26725716 ~ 26735787 (+)
ccnj ccnj,LOC102785723 other downstream 415637 28294205 ~ 28302333 (+)
LOC120548242 ccdc85a,LOC104955469,LOC102783086,LOC102310250,LOC102209339,LOC100696856 other downstream 1234120 29112688 ~ 29177494 (+)
G197531 NA other downstream 1469857 29348425 ~ 29349928 (+)
LOC120547718 LOC102789565,LOC100690068,LOC101471749,LOC103357097 other downstream 1640373 29518941 ~ 29619016 (+)
LOC120547658 NA other downstream 2274943 30153511 ~ 30201820 (+)

Expression


Co-expression Network