ogfrl1 (ogfrl1,LOC104917660,LOC103363704,LOC100701482)


Basic Information

Item Value
gene id ogfrl1
gene name ogfrl1,LOC104917660,LOC103363704,LOC100701482
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 31183320 ~ 31198691 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784893.1
ATTTCCCCTTTTTCTGCCATTTAAAAGCTTCGCTATGAGGGCAATGTGAGCCCAGCGCGCTTCAAACAGAAATACGAGGTCGCGGACAGGATTATGTAGTATTTTGTGCAAAGAAGAGGACAATAGAAGAGAGCAGGTGTTGCATGTTTTTAAATGGGAAATCTGTTGGGCAGCTGGCGTTTCAAGGAGCCGAGCACCGTTGAGGAATGCGACTCGACGTGGGGGTCGGACTCCGAGAGCGACGAACCGGCGGCGGCTGAAGATGACAGCGGCATCTCCGACTCTGTCAGCCCGGTGGAGAGCGACCGCTCCGCCGGAGATACGTCCCCTCAGCTGACAGAATCTCCGGAGTCTGTTCCAAAGATGAAGAGGAGTTTCTACGCTGCCAGGGACCTCTACAAATACCGGCATAGCTACCCGaacTACAGAAAGTCCCGGCAACCCAATGAGTATCGTAACCTGCGCTTCTACCTGAACAAGATCCCTCTAGTACCTGATGGTATCTATATAGAGGAGATTCTGACTAAGTGGAGAGGCGACTATGACAAACTGGAGCACAATCACACCTACATTCAGTGGCTGTTTCCGTTAAGAGAACAAGGGCTCAACTTCTACGCACATGAACTGACTCAGGACGAGATCAAAGAATTCCAAAGCACTCGGGAAGCTAAGCGCAGATTCCTGGCGGCCTATTCCCTGATGTTGGACTTCTACGGCATCAAACTGCTGGATAAGAGTGGTAATGTTGCCCGGGCTCCCAACTGGCAGGAGCGTTTCCAGCACCTAAATGAGTCCCAGCACAACTACCTGCGCATCACCCGCATCCTGAAGTCCCTGGGCGAGCTGGGCTACGAGGCCTTCAAGGCCCCGCTGGTCCGTCTGTTCCTGGAGGAGTCGCTGTGCCGCAACACCCTTCCCAACATGCAGCACAGCGTCCTCGAGTACTTTGTCTACACCATCCGCCTGCCGGCCACGCGCAGACGCCTGCTCCGCTACGCCCGCCAGCACTACAGGCCTGCCCACGCCTTCCTCTGGGGCCCGCCGCCCAAACGGCGAGGGGGCGGTGTCGGTGCCGGAGGTAGCGTAGGCGCTGGGAGTAGTGGGATCAGAGCACCTGCTCCAACACCAGAGCAACacaggaggggggaggagagcACCAGCTCCCCATCTGCAAGTGGTGTGGTTATTGTGTCTTCCCATGATGCCATGCTGTGCCCGGACCTGGCTGCAGGAGCGTCAAAGGGCCGCACAGGACTAGCTTCGAATACGGCTGGACTGGAGGGAGTGCTGATGATGGTGGGAGGGAGAGGCGAGAGGAATGAGTAAAATGAGATTGTTCCTTTGTAGGGGGATGGGGCTTtgattgttttctgttttctggcGATCGGTGCAGTTGTCAAACTTTCAAACGAAAATTGTTGTTACCAGGAACTTTATTCTTAGCAGAGTTATGAAGCTTCTGGACTCTTCTGAAGTTTAGGGGCAagactagggatgtaacgattcAACTCACTATTCGATTCACGATTTTAAGTTGACGATAcgattttctcctttttttttcttcaaatgggctgcagacaaatgactgaaaaatattcctttatttctataaactgtgcaaaacagaggtgtcctcttatcaa

Function

symbol description
ogfrl1 Predicted to enable G protein-coupled opioid receptor activity. Predicted to be located in membrane. Orthologous to human OGFRL1 (opioid growth factor receptor like 1).

NR:

description
PREDICTED: opioid growth factor receptor-like protein 1

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784893.1 True 1646 mRNA 0.53 7 31183320 31198691

Neighbor

gene id symbol gene type direction distance location
LOC120548109 LOC102195401,LOC103353517,LOC102300597,LOC106939791 coding upstream 178297 30711573 ~ 31005023 (+)
slc1a4 slc1a4,LOC102791775 coding upstream 512136 30625630 ~ 30671184 (+)
sertad2b sertad2,LOC104932742 coding upstream 582711 30506054 ~ 30600609 (+)
nvl NA coding upstream 847160 30267788 ~ 30336160 (+)
cdt1 NA coding upstream 1220230 29956720 ~ 29963090 (+)
LOC120547952 rims1,LOC102777706,LOC102298248 coding downstream 144268 31342959 ~ 31493220 (+)
bcl11aa bcl11a,LOC103363701,LOC102779517 coding downstream 314173 31512864 ~ 31573621 (+)
fancl fancl coding downstream 1246396 32445087 ~ 32483666 (+)
LOC120547814 NA coding downstream 1458295 32656986 ~ 32659866 (+)
LOC120547622 NA coding downstream 1463396 32662087 ~ 32666672 (+)
G197958 NA non-coding upstream 229049 30950360 ~ 30954271 (+)
G197854 NA non-coding upstream 508838 30674212 ~ 30674482 (+)
G197909 NA non-coding upstream 536000 30646403 ~ 30647320 (+)
G197889 NA non-coding upstream 694762 30488250 ~ 30488558 (+)
G197887 NA non-coding upstream 695907 30487115 ~ 30487413 (+)
G197982 NA non-coding downstream 264 31198955 ~ 31200000 (+)
G197983 NA non-coding downstream 2165 31200856 ~ 31202473 (+)
G197991 NA non-coding downstream 7400 31206091 ~ 31206356 (+)
G198002 NA non-coding downstream 42254 31240945 ~ 31242282 (+)
G198004 NA non-coding downstream 52698 31251389 ~ 31251871 (+)
LOC120547658 NA other upstream 981500 30153511 ~ 30201820 (+)
LOC120547718 LOC102789565,LOC100690068,LOC101471749,LOC103357097 other upstream 1564304 29518941 ~ 29619016 (+)
G197531 NA other upstream 1833392 29348425 ~ 29349928 (+)
LOC120548242 ccdc85a,LOC104955469,LOC102783086,LOC102310250,LOC102209339,LOC100696856 other upstream 2005826 29112688 ~ 29177494 (+)
ccnj ccnj,LOC102785723 other upstream 2880987 28294205 ~ 28302333 (+)
G197999 NA other downstream 35673 31234364 ~ 31234723 (+)
G198185 NA other downstream 1594597 32793288 ~ 32794661 (+)
G198245 rab1a,LOC104962072,LOC102231865 other downstream 1763697 32962388 ~ 32965074 (+)
slc2a15a LOC103367959,LOC104935160,LOC103476520,LOC106961144,LOC103155793 other downstream 1959038 33157729 ~ 33199862 (+)
si:ch211-51a6.2 LOC104924867,LOC103357113,LOC100694100 other downstream 2782820 33981511 ~ 34008003 (+)

Expression


Co-expression Network