LOC120547565


Basic Information

Item Value
gene id LOC120547565
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 34598539 ~ 34604373 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637076.1
AAAGTCTCCAGAATCTTCTTCACATACAGGATGTTATATGAGCTCCTTAACAAGGGAGTGAAATGTGATCATGTTaacccaaatgccccagcagcagcagcacgggagaGGAGAGTGTATCTGACAGAAGAGCTGCATCATCTATAGTGAGGCATGCGACGTGCAccacggcgggattggacacgcgagggtccgggagtggcaatgcgcgatgtgctcctggtggagcgggtgaacggagatggagtgggggtagaaggaaggggc
>XR_005637077.1
ACTCGACTCAATTATCATTAAATGCTCCTGTGTAAGTCATCAAAGTCTCCAGAATCTTCTTCACATACAGGATGTTATATGAGCTCCTTAACAAGGGAGTGAAATGTGATCATGcagcagcacgggagaGGAGAGTGTATCTGACAGAAGAGCTGCATCATCTATAGTGAGGCATGCGACGTGCAccacggcgggattggacacgcgagggtccgggagtggcaatgcgcgatgtgctcctggtggagcgggtgaacggagatggagtgggggtagaaggaaggggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637076.1 False 267 lncRNA 0.54 3 34598580 34604373
XR_005637077.1 True 287 lncRNA 0.52 3 34598539 34604373

Neighbor

gene id symbol gene type direction distance location
si:ch211-250c4.3 NA coding upstream 331327 34208791 ~ 34267212 (+)
fbxo28 fbxo28 coding upstream 419273 34164935 ~ 34179266 (+)
polr1c polr1c coding upstream 439765 34142536 ~ 34158774 (+)
si:dkey-191g9.7 NA coding upstream 460280 34130003 ~ 34138259 (+)
ndst2a ndst2 coding upstream 473666 34092137 ~ 34124873 (+)
LOC120548189 LOC103376442,LOC100702930,LOC102197432 coding downstream 87019 34691392 ~ 34710745 (+)
pitx3 pitx3,LOC108239172,LOC106916517 coding downstream 264206 34868579 ~ 34892999 (+)
LOC120548589 NA coding downstream 270077 34874450 ~ 34874577 (+)
eno4 NA coding downstream 437555 35041928 ~ 35080823 (+)
kcnk18 NA coding downstream 674572 35278945 ~ 35295506 (+)
G198654 NA non-coding upstream 5450 34592597 ~ 34593089 (+)
G198635 NA non-coding upstream 102289 34495736 ~ 34496250 (+)
G198606 NA non-coding upstream 329223 34269002 ~ 34269316 (+)
G198603 NA non-coding upstream 399161 34198262 ~ 34199378 (+)
G198536 NA non-coding upstream 582171 34016103 ~ 34016368 (+)
LOC120547566 NA non-coding downstream 28932 34633305 ~ 34654062 (+)
G198683 NA non-coding downstream 67545 34671918 ~ 34672166 (+)
G198696 NA non-coding downstream 109155 34713528 ~ 34713880 (+)
G198739 NA non-coding downstream 353704 34958077 ~ 34962980 (+)
G198756 NA non-coding downstream 425559 35029932 ~ 35030273 (+)
si:ch211-51a6.2 LOC104924867,LOC103357113,LOC100694100 other upstream 590536 33981511 ~ 34008003 (+)
slc2a15a LOC103367959,LOC104935160,LOC103476520,LOC106961144,LOC103155793 other upstream 1398677 33157729 ~ 33199862 (+)
G198245 rab1a,LOC104962072,LOC102231865 other upstream 1633465 32962388 ~ 32965074 (+)
G198185 NA other upstream 1803878 32793288 ~ 32794661 (+)
G197999 NA other upstream 3363816 31234364 ~ 31234723 (+)
LOC120548523 NA other downstream 290810 34895183 ~ 34948460 (+)

Expression


Co-expression Network