LOC120547661


Basic Information

Item Value
gene id LOC120547661
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 26023920 ~ 26069456 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637095.1
TATCTGGCCCATGAATATGCtggttatcttagcttagcataaagactgggaaCAGGGGGGAACAGCTAGTGTGGCTCAAAAAAATACTCCAGCCTgtacctctaaagctcactaataaaTGTGATCTCTATTATTTGTTTAGTCTGTAAAAAGCTGTGCCAGACTATTTCTATTTCTAGTCCTAGAGTCCTGTTGTAACtttgaggttgccaggcaacaagAAGAGGGGATAAAACcacaaattgtgttttttacacttcagttttttttaagcaaaaattacataaaatgttaGTGAGCGTGTTATGTTATTGTGAGTAGAAAAAGCAGCAGATAGAACTTTTACTAACATGTAGGTAAAGTAATGTTGACATGAGCTGTAAGCAAAGTGTTACAGATATCAAACGTGTTTAACACAGATGAGACCAAACTCTCTTACACTATTCCAAAACAGCGGGGGCTGACCTTCTCCCAGCAGGGTCGCTACAAAACCTGCCAAACATGTGTACTGACAATTTGACTTGAACCAGTCTTGTTTGTTGGTTGGCGTTAAGCTGAAGCTTACTCCAGACCTACATTATAGGCAATAGTGTGTTGTGTTGGTGGGAGTCTTGTTGTGTATATGCGTGTGCATTTTCATGTAAGTATTTGTCAGTACCTACCGCTGTGTAGCCACATAGTCAATATGTGTTTGAGTGCATGCAAACACATAGTGGCACTTTTTTTGCTGTGTCATAGGctctgtgtgcatttgtgtttacTTGTGCATCAATGTAGACAAAAAAGGACCCTGTCCAATTATTTCTGCAAATTTGTATAAGTaatcatactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttgtgtgttgtgtttgtatgGAAGTGTGTTTATACTGATTACAACACTTTTAACAGGCCTGGACCTGTGCAATCAGTGCAGATTTTCTGTAtgactctgtgtgtatgtgtgtgtatgtgtgtgtgtgtgtgtgtgcatgagtcaGCGGCTGGAGGTGGGGTGTAGGTGCTGAGAGACAACTAATCCTCGAGTACAGACATATGCCGGGCTGGAGCATCGCCAAGGACAAAGTAATGTTGCTGTTTTCCCAGACCTCAGCAATTACTTTGACCACCTCAGCTCCTCTGTTCCTGAGCTACACGTCACAGAGAGAAGACCAGATCACTGCGCTTCACCTGCTGTTCCCAGCATTCCTTGcttagctgctgtaatcctgggGGCTATggataaaataaacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637095.1 True 1287 lncRNA 0.42 3 26023920 26069456

Neighbor

gene id symbol gene type direction distance location
trnai-uau_2 NA coding upstream 41082 25982745 ~ 25982838 (+)
hcar1-3 NA coding upstream 43483 25977457 ~ 25980437 (+)
haao haao coding upstream 54404 25962355 ~ 25969516 (+)
xpo1b xpo1,LOC104925896,LOC103353500,LOC102296990,LOC103154927,LOC101480205,LOC106952069,LOC103477318 coding upstream 135846 25860831 ~ 25888074 (+)
ttl ttl coding upstream 245877 25769647 ~ 25778043 (+)
plekhh2 plekhh2 coding downstream 345068 26414524 ~ 26476727 (+)
si:ch73-105b23.6 LOC104955877 coding downstream 426052 26495508 ~ 26521577 (+)
calm2a calm1,LOC102778633,LOC102293206,LOC107396020 coding downstream 458327 26527783 ~ 26531726 (+)
mcfd2 mcfd2 coding downstream 549961 26619417 ~ 26622570 (+)
LOC120547700 plac9 coding downstream 688877 26758333 ~ 26767338 (+)
G196898 NA non-coding upstream 31299 25990468 ~ 25992621 (+)
G196836 NA non-coding upstream 83961 25911761 ~ 25939959 (+)
G196841 pex13 non-coding upstream 116051 25904720 ~ 25907869 (+)
G196788 NA non-coding upstream 211479 25812215 ~ 25812441 (+)
G196782 NA non-coding upstream 229512 25779526 ~ 25794408 (+)
G196921 NA non-coding downstream 31036 26100492 ~ 26101022 (+)
LOC120548055 NA non-coding downstream 37077 26106533 ~ 26111175 (+)
G196935 NA non-coding downstream 47645 26117101 ~ 26117640 (+)
LOC120548056 NA non-coding downstream 53435 26122891 ~ 26129531 (+)
G196967 NA non-coding downstream 221662 26291118 ~ 26311286 (+)
LOC120548053 LOC103353497,LOC102790632,LOC102299158,LOC102194143,LOC101482614,LOC100706574 other upstream 197491 25817251 ~ 25826429 (+)
zgc:110045 LOC102779765,LOC102305383,LOC100704767,LOC101482925,LOC102197868 other upstream 349014 25594496 ~ 25674906 (+)
prdx3 prdx3 other upstream 403245 25613407 ~ 25620675 (+)
LOC120548229 rab11fip2 other upstream 528415 25481831 ~ 25495505 (+)
cacul1 cacul1,LOC103374658,LOC102794354 other upstream 879666 25139047 ~ 25144254 (+)
stpg4 LOC103353520,LOC101467386,LOC102793681,LOC102299197 other downstream 465828 26535284 ~ 26548760 (+)
G197053 NA other downstream 593703 26663159 ~ 26663785 (+)
tmem254 NA other downstream 656260 26725716 ~ 26735787 (+)
pwwp2b pwwp2b other downstream 804759 26874215 ~ 26953805 (+)
LOC120547882 inpp5a other downstream 856962 26926418 ~ 27109140 (+)

Expression


Co-expression Network