Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120547711 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053130.1 |
| NCBI id | CM020927.1 |
| chromosome length | 36824488 |
| location | 11508195 ~ 11508933 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005637100.1 | False | 265 | lncRNA | 0.48 | 3 | 11508207 | 11508933 |
| XR_005637101.1 | True | 273 | lncRNA | 0.48 | 3 | 11508195 | 11508933 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| abcg8 | abcg8 | coding | downstream | 489 | 11495070 ~ 11507706 (-) |
| ppm1ba | ppm1b | coding | downstream | 107678 | 11380833 ~ 11400517 (-) |
| slc3a1 | slc3a1 | coding | downstream | 130657 | 11367724 ~ 11377538 (-) |
| six3a | six3,LOC104943435 | coding | downstream | 368769 | 11135612 ~ 11139426 (-) |
| cfap36 | cfap36 | coding | downstream | 621553 | 10873872 ~ 10886642 (-) |
| dync2li1 | dync2li1 | coding | upstream | 9968 | 11518901 ~ 11524138 (-) |
| cep170aa | cep170 | coding | upstream | 21657 | 11530590 ~ 11572618 (-) |
| arid5b | arid5b | coding | upstream | 75638 | 11584571 ~ 11658103 (-) |
| akt3a | akt3,LOC108244154,LOC107099926,LOC104931217,LOC100691860,LOC105927955 | coding | upstream | 260463 | 11769396 ~ 11834070 (-) |
| atl2 | LOC103370707 | coding | upstream | 480434 | 11989367 ~ 12007678 (-) |
| G193117 | NA | non-coding | downstream | 69784 | 11437887 ~ 11438411 (-) |
| G193005 | NA | non-coding | downstream | 354227 | 11153711 ~ 11153968 (-) |
| G192988 | NA | non-coding | downstream | 489270 | 11018123 ~ 11018925 (-) |
| G192952 | NA | non-coding | downstream | 635754 | 10860173 ~ 10872441 (-) |
| G192929 | NA | non-coding | downstream | 740154 | 10767029 ~ 10768041 (-) |
| G193148 | NA | non-coding | upstream | 73325 | 11582258 ~ 11584160 (-) |
| G193149 | NA | non-coding | upstream | 90846 | 11599779 ~ 11607814 (-) |
| G193191 | NA | non-coding | upstream | 206240 | 11715173 ~ 11715859 (-) |
| G193201 | NA | non-coding | upstream | 254730 | 11763663 ~ 11808556 (-) |
| G193205 | NA | non-coding | upstream | 284741 | 11793674 ~ 11867798 (-) |
| camkmt | camkmt | other | downstream | 150523 | 11236314 ~ 11357672 (-) |
| LOC120548461 | NA | other | downstream | 545305 | 10956572 ~ 10962890 (-) |
| LOC120548128 | LOC103374855 | other | downstream | 554172 | 10890469 ~ 10954023 (-) |
| hhat | hhat | other | downstream | 852485 | 10633244 ~ 10655710 (-) |
| nphp1 | NA | other | downstream | 1324993 | 10168452 ~ 10183202 (-) |
| lyrm7 | lyrm7 | other | upstream | 15973 | 11524906 ~ 11527284 (-) |
| adss2 | adss,LOC107098117,LOC107375820 | other | upstream | 379159 | 11888092 ~ 11918814 (-) |
| phactr2 | phactr2 | other | upstream | 788556 | 12297489 ~ 12348599 (-) |
| G193427 | dnajc9 | other | upstream | 1438762 | 12947695 ~ 12948609 (-) |
| mzt1 | mzt1 | other | upstream | 2196792 | 13705725 ~ 13707932 (-) |
