Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120548233 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053130.1 |
| NCBI id | CM020927.1 |
| chromosome length | 36824488 |
| location | 25501529 ~ 25584577 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005637158.1 | True | 977 | lncRNA | 0.45 | 5 | 25501529 | 25584577 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fam204a | fam204a,LOC102781047 | coding | upstream | 70620 | 25413993 ~ 25430909 (+) |
| neurog3 | NA | coding | upstream | 183396 | 25316395 ~ 25318133 (+) |
| pcbd1 | pcbd1,LOC106525612 | coding | upstream | 202083 | 25296263 ~ 25299446 (+) |
| LOC120548364 | sec23ip | coding | upstream | 269017 | 25222425 ~ 25232512 (+) |
| inpp5f | inpp5f | coding | upstream | 288025 | 25198539 ~ 25213504 (+) |
| dennd10 | fam45a | coding | downstream | 20889 | 25605466 ~ 25610518 (+) |
| vwc2 | vwc2 | coding | downstream | 93618 | 25678195 ~ 25707242 (+) |
| LOC120548498 | NA | coding | downstream | 138032 | 25722609 ~ 25734715 (+) |
| ikzf1 | ikzf1,LOC102780616 | coding | downstream | 155548 | 25740125 ~ 25758318 (+) |
| ttl | ttl | coding | downstream | 185070 | 25769647 ~ 25778043 (+) |
| G196696 | NA | non-coding | upstream | 2249 | 25496668 ~ 25499280 (+) |
| G196690 | NA | non-coding | upstream | 67633 | 25427643 ~ 25433896 (+) |
| G196648 | pdlim1 | non-coding | upstream | 180660 | 25318266 ~ 25320869 (+) |
| G196595 | mcmbp | non-coding | upstream | 281615 | 25219547 ~ 25219914 (+) |
| G196563 | NA | non-coding | upstream | 311850 | 25189430 ~ 25189679 (+) |
| G196782 | NA | non-coding | downstream | 194949 | 25779526 ~ 25794408 (+) |
| G196788 | NA | non-coding | downstream | 227638 | 25812215 ~ 25812441 (+) |
| G196841 | pex13 | non-coding | downstream | 320143 | 25904720 ~ 25907869 (+) |
| G196836 | NA | non-coding | downstream | 327184 | 25911761 ~ 25939959 (+) |
| G196898 | NA | non-coding | downstream | 405891 | 25990468 ~ 25992621 (+) |
| LOC120548229 | rab11fip2 | other | upstream | 6024 | 25481831 ~ 25495505 (+) |
| cacul1 | cacul1,LOC103374658,LOC102794354 | other | upstream | 357275 | 25139047 ~ 25144254 (+) |
| dact2 | dact2,LOC103391347 | other | upstream | 488280 | 25008474 ~ 25013249 (+) |
| G196439 | wdr11 | other | upstream | 932362 | 24564550 ~ 24569167 (+) |
| LOC120548495 | ate1 | other | upstream | 1075027 | 24367954 ~ 24426502 (+) |
| zgc:110045 | LOC102779765,LOC102305383,LOC100704767,LOC101482925,LOC102197868 | other | downstream | 9919 | 25594496 ~ 25674906 (+) |
| prdx3 | prdx3 | other | downstream | 28830 | 25613407 ~ 25620675 (+) |
| LOC120548053 | LOC103353497,LOC102790632,LOC102299158,LOC102194143,LOC101482614,LOC100706574 | other | downstream | 232674 | 25817251 ~ 25826429 (+) |
| stpg4 | LOC103353520,LOC101467386,LOC102793681,LOC102299197 | other | downstream | 950707 | 26535284 ~ 26548760 (+) |
| G197053 | NA | other | downstream | 1078582 | 26663159 ~ 26663785 (+) |
