G199227



Basic Information


Item Value
gene id G199227
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 514404 ~ 518439 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU270137
ttttttacattgaagtcaatgagagcagacttcaaccccttaaaatcttcttctgctcccaaaagtttcaactccttcatactttcacctacagacgccaaacaaactttaaaatgttcacaaaatattcagctatccggggtctacttttcagtttgatatcttttacagtttttgtgaaaaagctgtttaagtttagtgattatttcaggaaattttatcgattaaacagggtgtgtattgcgctgcttagagtggatgacatcacagctagagggtgaagcttcgaaaaaattatcttagttccttgtctgtaaactgctctcacgcccacaatatctacttgtcatacacaatttatacatcaaaacgtaggtatttttgtctagtttcag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU270137 True 395 lncRNA 0.35 2 514404 518439

Neighbor


gene id symbol gene type direction distance location
LOC120549575 NA coding downstream 138017 375236 ~ 376387 (-)
LOC120549547 NA coding downstream 504369 7265 ~ 10035 (-)
LOC120548861 NA coding upstream 180482 698921 ~ 701906 (-)
LOC120548839 NA coding upstream 643241 1161680 ~ 1173622 (-)
LOC120549623 NA coding upstream 681933 1200372 ~ 1200692 (-)
LOC120550115 NA coding upstream 759767 1278206 ~ 1278324 (-)
LOC120550213 NA coding upstream 773313 1291752 ~ 1291870 (-)
G199212 NA non-coding downstream 57629 456284 ~ 456775 (-)
G199210 NA non-coding downstream 67275 446161 ~ 447129 (-)
LOC120549210 NA non-coding downstream 114542 399083 ~ 399862 (-)
G199183 NA non-coding downstream 122128 391599 ~ 392276 (-)
G199141 NA non-coding downstream 312115 201726 ~ 202289 (-)
G199230 NA non-coding upstream 3045 521484 ~ 521803 (-)
G199231 NA non-coding upstream 4905 523344 ~ 523631 (-)
G199235 NA non-coding upstream 73560 591999 ~ 592230 (-)
G199244 NA non-coding upstream 110153 628592 ~ 628795 (-)
G199245 NA non-coding upstream 110372 628811 ~ 629160 (-)
G199247 NA other upstream 112197 630636 ~ 631498 (-)
G199305 NA other upstream 435568 954007 ~ 958248 (-)
G199358 LOC795194 other upstream 571528 1089967 ~ 1090979 (-)
gphb5 gphb5,LOC104954562,LOC102297584,LOC108250814 other upstream 1544056 2062495 ~ 2093597 (-)
kcnh5b kcnh5,LOC102299992 other upstream 2181088 2699527 ~ 2964911 (-)

Expression



Co-expression Network