G199448



Basic Information


Item Value
gene id G199448
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 1698046 ~ 1698258 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU270416
ccctcaaaacaaaactcgtcacttttaacacctcttcaccctggtacacacctgcactccgaaaaatgaaacaaactggccgccaacttgaacgtctgacaaagaaatcatccctcacagtccatcatgaagcctataaatcccatctcatcgcctacaaagatgccctcattgctgccaaatctgcctacctctccaccatcctcaccgacc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU270416 True 213 lncRNA 0.48 1 1698046 1698258

Neighbor


gene id symbol gene type direction distance location
LOC120550000 NA coding downstream 231201 1466728 ~ 1466845 (-)
LOC120550144 NA coding downstream 235572 1462356 ~ 1462474 (-)
LOC120549992 NA coding downstream 242151 1455777 ~ 1455895 (-)
LOC120550227 NA coding downstream 242374 1455554 ~ 1455672 (-)
LOC120550212 NA coding downstream 243918 1454010 ~ 1454128 (-)
LOC120550236 NA coding upstream 128926 1827184 ~ 1827302 (-)
LOC120548872 NA coding upstream 492104 2190362 ~ 2191816 (-)
LOC120548877 NA coding upstream 756015 2454273 ~ 2461461 (-)
LOC120549188 NA coding upstream 763278 2461536 ~ 2465819 (-)
ppp2r5eb ppp2r5e,LOC105935514 coding upstream 1299989 2998247 ~ 3068592 (-)
LOC120550091 NA non-coding downstream 2666 1695262 ~ 1695380 (-)
LOC120550088 NA non-coding downstream 2888 1695040 ~ 1695158 (-)
LOC120550140 NA non-coding downstream 3327 1694601 ~ 1694719 (-)
LOC120550498 NA non-coding downstream 3550 1694378 ~ 1694496 (-)
LOC120550266 NA non-coding downstream 3773 1694155 ~ 1694273 (-)
LOC120550277 NA non-coding upstream 1825 1700083 ~ 1700201 (-)
LOC120550142 NA non-coding upstream 2271 1700529 ~ 1700647 (-)
LOC120550203 NA non-coding upstream 2923 1701181 ~ 1701299 (-)
LOC120549966 NA non-coding upstream 3146 1701404 ~ 1701522 (-)
LOC120550147 NA non-coding upstream 3369 1701627 ~ 1701745 (-)
G199358 LOC795194 other downstream 607067 1089967 ~ 1090979 (-)
G199305 NA other downstream 739798 954007 ~ 958248 (-)
G199247 NA other downstream 1066548 630636 ~ 631498 (-)
gphb5 gphb5,LOC104954562,LOC102297584,LOC108250814 other upstream 364237 2062495 ~ 2093597 (-)
kcnh5b kcnh5,LOC102299992 other upstream 1001269 2699527 ~ 2964911 (-)
wdr89 wdr89,LOC102785763 other upstream 1372367 3070625 ~ 3078647 (-)
snapc1b NA other upstream 1517574 3215832 ~ 3238597 (-)
G199898 vrk1 other upstream 1817012 3515270 ~ 3522927 (-)

Expression



Co-expression Network