zbtb42 (zbtb42,LOC102793331)


Basic Information

Item Value
gene id zbtb42
gene name zbtb42,LOC102793331
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 22440729 ~ 22447943 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU277869
TTCATTGTTCATCTACATGGAGGAGATACCACAGTAATTTGATTGCACATCCATCAGGAGCATATCAGAATTATCAGAGAATTGTTTTCCAAGTGCTAGatttaaaaacactaaaaaatATGTCTGGCAACTGTGACAATACATGTCAAATGTAAGTGCTGACTACCTATCCATTTCAGTGTAGCCCACcctaaggtgttttttttttattttttttatgttaattatCAAGACTTCTTTCAGGACGAGTCAAAAGCATTTTCTCTGAGAATGACCGCAATCTGTTTTCATTCTACTCCCTGACCTGCAGTCAGCGATGGGGCTTGAATGTACAAAGCTTGTGCGTTACTTTACAAGAAATGTGATCTGGCTGTTGCACTAACACTCGTGCCGTTCGCATACCCTGAGAGTTTAATCACTTCAGTAAGAACAATACATGTCAGATACATAGCTGTTGTGTAGTGTTAATAATGTCTATTTCAATCAGAACACAGGAATGTAgattttgtcactgtttttagtttttttaaaggaacgTTTCTTATATGGTGCAAGTTAAATTGCTTGATTCTTTAATGTACATGTGTACAGAGGTAGAAAAACTAACGATATGTGaagaatttcttttctttttattgtttgcCGTCTTTATTTATACCTCCAGAATGATCACCAAATGTGCCTTGTAGACACGACTAGGTGTTGCATCTGGAGAAGCCCTTTTTCTATATTGTACATGTTTGCCCTTGTCTGCGGCGGTAAAGTTCACATCACAGCAACAAAAACCCATTGAAGTGATTCACAAGTGTTGTTCCTGTTTTTTCTATCATGTCAATAATCTGAGTAACGAAGTTTTCAagtccatttctttttttgctgctttgcAAGAGATTACATTTGAGATTTATTTGACCATTTTTGTGAATAAATCTGTTTGTGTTGAACTGAAGACATGCATTTTTGTGATTTGGCTTTTAGTAGCCAATACTACTGGGAACTAACAGTCTGTTTATTTAGTTAATGTCACTGTTGAATGTGAAACACTTGAGATTTTGACTGTTGACTTGTATGGAAACGGCGCTACTCTTGATCGAGGGCTACGTATGTTTGCCTAACTCATGCTGTATGatctttaagtaaaaaaaaaaaattactttaccAATACTGGAATTTTGTCCTCTGCAGGTTACAACTGTGAAATTGTGTATAATCATgagaaatatttattattgcatttGCTTCTTGTGCAACGTTTGACTGTCTCAGTTCTAATTTGGTAAAGGAAAAAAAGCTTCTAAATGTCAAACGAAAGTCTTTTTAATAGAATTTGTAGAAGTGCCATTAgaatttaatataattttttaataAAGGTATATTTTATAGTAATCAACTGCTTCAGTGTTAGTGGTGTAGAGATTAGAGGACAATCTTTATGCAGAATTGACATTGCTTAGATACTGAGGCAATTTACTCTTGATCTATAACTGTATGTGCATTTTCTTTGTTTGCGCTTTTGGagtgtgcttgtgtgcgtgtgctgtgGAAATGTGACAATCTTGATTTAGATCTTTCTTAAGATTATGCATAGAATTAAATGGAAC
>XM_039786593.1
TCACACTGAAAGTCCCCCCCCCGTTCATGGGACAGGTGTTGTAATAAGACAGCCAATTGATGTTCCCAGTGTACTCTGCTACTTGCTGCCGCTGTGTGAGTTCACGGAGTAGTACAGAACTTATTGTAGTCGCGCGATATCGCGAGACTTGTGCCATTATCAACCTGCTTGACACACAGCAGCGCTGAGTGCAGCCTGCCTTGCCAGGGTCGGACTGAAGCTCAAGAAACGACAAGGAGAAGCGAACATCTGGCCGCACATCATGAAAGGACGTGGGAGCTTCTAGGAAAGAACACGACGAACCGGGCAGAAATAAATGTTATGAAGGAAGAATGGAGTTCCCAGACCATAGCCGCCAGTTGCTGCAGTGTCTGAGTCAGCAGCGTCACCAAGGTTTCCTCTGTGACTGCACTGTTCTTGTCGGGGAGGCTCGATTCAAAGCGCACAGAGCGGTGCTGGCCTCCTGCAGCATGTACTTCCATCTCTTCTACAGGGACCAGCTGGACAAAAGGGACGTTGTGCATCTCAACAGTGACATTGTGACAGCCCCGGCTTTCAGTCTGCTCCTTGAATTTATGTATGAGGGGAAGTTGGAATTCAGCTCTCTCCCGGTGGAGGATGTCCTGGCAGCAGCCAGTTACCTCCACATGTATGATATAGTGAAAGTGTGTAAAGGCAAGCTTAAAGATAAGGAACTCTCCTCTCTGGATGAAAAGATAAGTGAGGGTTTGGGACTCGGCTGTCTGGACAGGGAAAATTCCTCCGAAGGCGAGCTGCACAGTAAGCAGCTCATCCGGCGACAGGCCCAGACACAGTCTCAGGGGCTTCACAGAGCCCCCCCGGCAGACGAGTTTGACATGGACAACAGCGAAGTCAGGCTGGCTGTCACAGATTGTGATAGGTCTGCATGGAGCAGGCAGAAGGCAAACGGTCACTCTGGCAGGTCCCCGGACCTTGTAGGTGTCAATTATTTGTCAGCAGAGGCCGAGCCCTGCGTCCAAACAGCTGGAAAAACAAAAGCTGATGTCAGTAGTTCCACCGTATCGCTGTCCCAGAGGTCCCGGGCTTCAGATGACATGGACTGTGCACTGGATTTGTCTTTCAAGCCTCTGTCTAGCAGAGATCCCTTACACCCCTCCTACGTCTCGGGACAGCTGGCCCTCGACAGCCAGCAGCAGGGCACTGAGCCACTTGTTAAAGACGAACACGACTTGCTGTCAGAGCAGGAGGACAGTGAGCCGATGAGCCCTGAGAGCCAGCGCTTTGGGAATAGTGCCAGGAGCTCAGTGGTGACAGGGTTCGCTGCCCTCTTCCCAGGCAACAACGGCTCCACAGCCGCCCTGCTCTCCCAGGAGGAGGACCTGATGGACGAGGAGGGGGAGGCctgcagagggagggagggcgcCCCAGGCAGGGAggtagaggagaggaggggtagGCTGCTGGGGGacagcgaggaggaggaggaggacgactTGGCCTCTTCAGACATCTCCACCTCCAGCGGGGTGCTCCTGCCCCCGGggcaacaggtgtgtgtgtgcccccTCTGCAGTAAAGTCTTCCCCAGCCCCCATGTGCTGCAACTGCACCTCAGCTCCCACTTCCGTGAGAAGGACGGCGCTCGCTCCAAGTTGTCCCCCGACGGCTCGGTCCCCACTTGCATGCAGTGCAACAAGACCTTCTCTTGCATGTACACCCTCAAGCGTCACGAGCGCACACACTCCGGCGAGAAGCCATACACCTGTGGCCAGTGTGGCAAGAGCTTCCAGTACTCCCATAACTTGAGTCGGCACGCTGTAGTCCACACACGCGAGAAGCCTCACGCTTGTAAGTGGTGCGAACGGCGCTTCACCCAGTCTGGGGACCTCTACCGCCACATCAGGAAGTTTCACTGTGGCCTTGTCAAGACTCTCGCCATTGGATAAAAGACCTCTCACCAGTGCCATGACACAAGACCAAATGTCGTTTCATACACTGAAAACTACTACTGAACACTTTCCCCATTAGTACACACACGTTGGCAGGTTGTTGGAGATGTTTTTGGATTCTACCCCATGTGGCATTTCTCAAGTTAAAGATGTAGCAATGTTAAAAACTGGAGCTGTTTTCTGTGTCACAGGCATACATGATGGTCAGAAGCAGACAGTTGAAGGTGCACAGGCTGTTAGGATAAACATGGGTGCTGTGAAACCCAAGCTGGATCTGTATGGACGAAGGTGAACAAATCAGATGATGCACTTGTTTCTCTTTTGTTTGTGTCAATCTGTTGAGTTAATTTAAGGAGTATATTTGCTGAAAGAAAAAGCATCCTATGTTCGTACCCTATGGGCAAATGGGTGATAGCTAATGCTAACACATGTTAATACAATCGTCAGAGTGAGTGAGACTTTTATTTGTGCACATGGGAGATCAGAACCGTCCGCAAGTAGCAATATATGATTTTAaactcttattattattattattattattattattattattattattatttattttttgggattTGTTTAGTCCTTAACAAGTAAACTACTATAAGGCAGCAAAACTAATGAAGTTTGACTACTGGAAGTATAACTATTTTTTTTCATGGAAGTAGAATTTTTGTTTGGTTGAAATGAAGTTGGTTAGTTTTATGTTGTTTATAACAAGAGGCAAGCAGACCATCATATCACCatatttcctttctttttttgttgccttGGGGTGAGATACCAGCTCTTTAGTTGCTAATGTATGTGAGCACATATCGATGGAACGGCCTTCTAATTTGCTACTTAAAAATAAGTtgtataatcagaggaaggatGGAGAGTAGTCAAAAGCTAATGCCTGTAACACTGGTGCCTACTAAAATGCTTATCACTTCACCTAGTGTACTTACTTAGACAAGAATGAGAAATATCACTATGCCTTCTTGTAAAGTTCTGTGAGTTTTcaggcctttaaaaaaaaaaaaaagaagaaaaaaatctggaGTACACTCCACATACCAGGCGGTAACAAAGGTAATTGTCTACTCTGGAATGCCAATTGATCCATGTGCGACCTTAGTTAAATCATTTACAAGAATGTAATAAAAGTGCGTAAATAAAGCTCTCGTCAATTAAATAGTTATTGACTTGTTTGGGTTAAAAGAAAAACGGTTGCCGGTAAATGACCTTGTTATTTCGTGGTATGGCGTAAAGGGTACACTGACACGGTGTTTAGGGCAAACCCTCAGCAGgcagggagggaaggagggagggagggagacaggtgGATAGTCAGTACTTTGTTGGTGTCATCAAAGCTGCGCTCCAAGTGCCATTCAGCTGAATCTACTGACTTTTCGTTCTTTGAATTAACCTTTTCACATCATAATATCTTCTTACTGTACGTGTGTACGTTACTACTGATGAAGCTGGAGCCTTTAGAGATGCTTCTCCTTGAAAGAATCTTTGGGCAGGAAATGTATTTCTTGTGTCTGTTCACATAGATGCTATCTGGATTCTTAGCAGGGGGCGTATTTGTCTAATCTGTCCTGAGAAGACTTGACCAGAATTTATTTATTAGTTTGACTTGGTTCAGGGTTTACTGTAGGTGTACTTCTTTTTCTATAAGCTTGAAAGACGCTGCGTCTTGCCTAGCGATCTTGGTACTCATTAACTGGTATTAGGGCTGTCTGTTCGTTTTCTCTGTGCAAATCGAGTTCATGTAATGGTATTTTAATATACCGTGTAGAAATCTCTGCTGGGTGTTCAAGATTTGTCACATGGAACATAGAGAAGCACTTGTTTTAAGCATGCATATAGTTTCAACACTATTGTCTAGGCTGCTATTTCTTACTATATGTATAtttaatgtaaatatatattctatttatcaaactgtttttgttgttccgTGTTACAACATGTGTAAGGTGGAGAGAGTCAGGTGTCTTATCAAGACTGCAGTCTCTTAAAAGTGTCACGTCTTCCCCAAGGAGTTTGGTTCCTTCCCCTAGGAAACAGTTGTTCACAAGCACAGCCACACTGATACGGCACTGGCTACCTATAGAAAGGAGACAATACAGGcattgtgcccccccccccccccaccaccacccagGTAATTCTTAAGGGATCATTGTGTATCTCTGTGCTAGCTGTGGGGAGAAAAGGCAGTGTAAGTCTCTCTTTGCACTTTTCTGTATTGAATGGAGCCATTGGAATGTGAGAAATGTATTTAGCAAAGGGAGACCAAGGACACTGTAAACAGGTGTATTGTTTTGGAGGCATCAAAGAACAGCCCCACATCCCGGCATGCATTAGATAAATGCTTCATTGTTCATCTACATGGAGGAGATACCACAGTAATTTGATTGCACATCCATCAGGAGCATATCAGAATTATCAGAGAATTGTTTTCCAAGTGCTAGatttaaaaacactaaaaaatATGTCTGGCAACTGTGACAATACATGTCAAATGTAAGTGCTGACTACCTATCCATTTCAGTGTAGCCCACcctaaggtgttttttttttattttttttatgttaattatCAAGACTTCTTTCAGGACGAGTCAAAAGCATTTTCTCTGAGAATGACCGCAATCTGTTTTCATTCTACTCCCTGACCTGCAGTCAGCGATGGGGCTTGAATGTACAAAGCTTGTGCGTTACTTTACAAGAAATGTGATCTGGCTGTTGCACTAACACTCGTGCCGTTCGCATACCCTGAGAGTTTAATCACTTCAGTAAGAACAATACATGTCAGATACATAGCTGTTGTGTAGTGTTAATAATGTCTATTTCAATCAGAACACAGGAATGTAgattttgtcactgtttttagtttttttaaaggaacgTTTCTTATATGGTGCAAGTTAAATTGCTTGATTCTTTAATGTACATGTGTACAGAGGTAGAAAAACTAACGATATGTGaagaatttcttttctttttattgtttgcCGTCTTTATTTATACCTCCAGAATGATCACCAAATGTGCCTTGTAGACACGACTAGGTGTTGCATCTGGAGAAGCCCTTTTTCTATATTGTACATGTTTGCCCTTGTCTGCGGCGGTAAAGTTCACATCACAGCAACAAAAACCCATTGAAGTGATTCACAAGTGTTGTTCCTGTTTTTTCTATCATGTCAATAATCTGAGTAACGAAGTTTTCAagtccatttctttttttgctgctttgcAAGAGATTACATTTGAGATTTATTTGACCATTTTTGTGAATAAATCTGTTTGTGTTGAACTGAAGACATGCATTTTTGTGATTTGGCTTTTAGTAGCCAATACTACTGGGAACTAACAGTCTGTTTATTTAGTTAATGTCACTGTTGAATGTGAAACACTTGAGATTTTGACTGTTGACTTGTATGGAAACGGCGCTACTCTTGATCGAGGGCTACGTATGTTTGCCTAACTCATGCTGTATGatctttaagtaaaaaaaaaaaattactttaccAATACTGGAATTTTGTCCTCTGCAGGTTACAACTGTGAAATTGTGTATAATCATgagaaatatttattattgcatttGCTTCTTGTGCAACGTTTGACTGTCTCAGTTCTAATTTGGTAAAGGAAAAAAAGCTTCTAAATGTCAAACGAAAGTCTTTTTAATAGAATTTGTAGAAGTGCCATTAgaatttaatataattttttaataAAGGTATATTTTATAGTAATCAACTGCTTCAGTGTTAGTGGTGTAGAGATTAGAGGACAATCTTTATGCAGAATTGACATTGCTTAGATACTGAGGCAATTTACTCTTGATCTATAACTGTATGTGCATTTTCTTTGTTTGCGCTTTTGGagtgtgcttgtgtgcgtgtgctgtgGAAATGTGACAATCTTGATTTAGATCTTTCTTAAGATTATGCATAGAATTAAATGGAACaactttctctc

Function

symbol description
zbtb42 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Used to study distal arthrogryposis. Human ortholog(s) of this gene implicated in lethal congenital contracture syndrome. Orthologous to human ZBTB42 (zinc finger and BTB domain containing 42).

NR:

description
PREDICTED: zinc finger and BTB domain-containing protein 18.2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU277869 False 1601 lncRNA 0.35 1 22440740 22442340
XM_039786593.1 True 5918 mRNA 0.43 2 22440729 22447943

Neighbor

gene id symbol gene type direction distance location
dnajc17 dnajc17 coding downstream 37755 22369484 ~ 22402974 (-)
LOC120549450 bmf,LOC103357015,LOC104949702 coding downstream 164873 22267043 ~ 22275856 (-)
crim1 crim1,LOC102796934 coding downstream 232786 22175303 ~ 22207943 (-)
LOC120549620 actc1a,act2,zgc:86709,LOC105024319,LOC100534413,LOC102689871 coding downstream 293744 22143632 ~ 22146985 (-)
arhgap11a LOC103367065 coding downstream 297939 22135489 ~ 22142790 (-)
xgb LOC102209385,LOC101472381,LOC100708898,LOC102791858 coding upstream 80589 22528532 ~ 22537515 (-)
LOC120549361 plekhg3,LOC103357032 coding upstream 90246 22538189 ~ 22574490 (-)
spint1a NA coding upstream 128826 22576769 ~ 22584930 (-)
zfyve19 zfyve19 coding upstream 141256 22589199 ~ 22600255 (-)
LOC120548817 ankrd63 coding upstream 180393 22628336 ~ 22630355 (-)
G205189 NA non-coding downstream 4152 22427890 ~ 22436577 (-)
G205186 adssl1 non-coding downstream 14098 22424657 ~ 22426631 (-)
G205185 NA non-coding downstream 16693 22422711 ~ 22424036 (-)
G205173 NA non-coding downstream 74911 22364483 ~ 22365818 (-)
LOC120548859 NA non-coding downstream 80872 22358829 ~ 22359857 (-)
G205205 NA non-coding upstream 45340 22493283 ~ 22493635 (-)
G205212 cep170b non-coding upstream 60512 22508455 ~ 22511405 (-)
G205219 NA non-coding upstream 77023 22524966 ~ 22527086 (-)
G205242 NA non-coding upstream 187258 22635201 ~ 22635462 (-)
G205297 NA non-coding upstream 257774 22705717 ~ 22719412 (-)
chrm5a LOC103374637,LOC108232519,LOC106520150 other downstream 509463 21920885 ~ 21931266 (-)
LOC120549141 max,LOC103363129,LOC100701192,LOC101485218,LOC108232653,LOC102777802 other downstream 683134 21752386 ~ 21757595 (-)
LOC120549379 LOC100705232,LOC102305635,LOC102778868,LOC104921326,LOC101482755 other downstream 736959 21656220 ~ 21703770 (-)
LOC120548683 NA other downstream 1448041 20990937 ~ 20992688 (-)
G204685 coq6 other downstream 1587645 20852096 ~ 20853084 (-)
LOC120549283 khdrbs1 other upstream 330062 22778005 ~ 22783472 (-)
G205380 NA other upstream 462164 22910107 ~ 22937857 (-)
LOC120549684 NA other upstream 496994 22944937 ~ 22947810 (-)
arid1b LOC103368034,LOC102292653,LOC101481705,LOC102196556 other upstream 576218 23024161 ~ 23234798 (-)
LOC120548654 LOC106573685,LOC106610772 other upstream 1260046 23707989 ~ 23710861 (-)

Expression


Co-expression Network