G205493


Basic Information

Item Value
gene id G205493
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 23536946 ~ 23574012 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU278302
acacacacacacaaaaaGTGCAATTACCTCCGGAAAAGTACACCTACCCTTTCTCCCTCGTACTTCACTGATGTCCTCTCAAAATGCATGTGGACTGGAGGTGATAACTTTACACAACACACTTAAAATGTAAGTGGCATAGTGGACTGTGATTGGCTTCCAAGTTAGCTTAGCTTTAAAGTTATGAATAATTGTGAGAGACAGATTGAAAGAACTGACCGAGAAACTGAATCATGGACAGACTGAACGAAACAGTTTAGTGGTCACTAGTCTAGCATCTtgacactttaaaaaataaaaaaataaaaaaaaaacacaacaaaacaccaTTCAGGGAGGTGACCAGACCAGAAAATATCCAGGCCATGCCACTGAAGATGAATGCTTTAATACAGACATTCCTCTTGAGCTGCTCATCCACAATGTTGTGTGACACTCATTCTCCAAATTCAGGACCAAATGTTTCCTATACATAGACCAATTTGCAGCAGTCAGGCGCACATACATTTCTTTACTTGACACAATGGCAATAACATAAgtgatttttacttttttaactcAGCGCTCCTTAACACATGCCACCAATAATAACTTTAGAAGCTATGGGAACCACTGGGCATCATGTCTCCTTTTCTCCTTTTCCTTGTTTGGAGAAAAGCCTCACTGTGAGCAAATGATGTAAGAGCAGGAGTCGAACATTTACATAGTTAGACACCACCTGCTGTAAGGCCAAATCATTGGGAAAGAATGACAGGATTGTTTAATAACTTTCTCATGCCACCCCTGCTTTTTACTTCTTCATTCCAAGCCTTAATGTGCTCTTCCAACCATGTGCACGGATGGCAGATTTACTgaatgagtgtgagtgtgtgtgtgcgtcagatACCATTAGGCTTCCTATGATTAATCCGCTGCCCTTGTGCTAAGCCGGGGAATTCTGCCGATTCATCACAGCTGGCCCAGCAGGGCCAGAACGAATAGGGACGCGAGGAGAATGACCGCTCACTGTGCAACACACAGGAAGGGTGCCAAGATTCCACCCCTCTTTCATACAGTATCCTCACTCTTCCTGtatttctctcccccccccccactgtaCCATCCTCCTTCTACTACATACAGTTCAAGCTCattagtgtgtgaatgtgtgcgttTTTGTATGTTGACCTACCTGAGGGTCCATGGCCGTCCTTGCTGGAAAAGTTACCCATACTGCAGTAATGGGGTTTGGGCCACTGATAGGGCCCTGCAGGTGCTTGTTGCTCCTTCACTCAGCCCTGACTAAAGTGGCACTGTAGAGTGGATACAAACCCTTGAAAGCGGACAAATAACTCCCAAATCCTTTTGTTCGGGGTCCAGTAAACTCTTCTTCTCCACGCGTTGCTTCTTTCAGCACAACTCAACCAAGCACAGTGCCCTGGTGTGTCCTCGGCTCCTCGCGGAGGAGAAGGAATGGCAAATAGACTGCAGAATCCTTAGAATAAAGTGTCATCCTCTCAGCAGCATTTTGCTGCTGGAAACATCTTAAATAAGAGAACAAAACGCGATTTAAATGCGAACATCGAACCAAAGAGCGAAAAATTCAACTCTGGACATCGATGACCGACGGCGCCGATAACCCCTCGATGTGTCCACTAGAGGGCACTGTTAGGCCGCGTTATGAGGACCTGTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278302 True 1673 lncRNA 0.45 3 23536946 23574012

Neighbor

gene id symbol gene type direction distance location
dlgap2a dlgap2 coding downstream 18951 23348792 ~ 23517995 (-)
cln8 cln8 coding downstream 195155 23337958 ~ 23341791 (-)
arhgef10 arhgef10 coding downstream 199829 23279466 ~ 23337117 (-)
col12a1a col12a1 coding upstream 76656 23650668 ~ 23707369 (-)
tmem30aa LOC103353750,LOC104952165 coding upstream 137880 23711892 ~ 23717389 (-)
LOC120549835 LOC103353749 coding upstream 143879 23717891 ~ 23742976 (-)
LOC120549330 cldn20,LOC102228876 coding upstream 188322 23762334 ~ 23767849 (-)
LOC120549331 tiam2,scaf8 coding upstream 208968 23782980 ~ 23904648 (-)
G205494 LOC102076813 non-coding downstream 1383 23529490 ~ 23535563 (-)
G205489 NA non-coding downstream 12632 23518903 ~ 23524314 (-)
LOC120548729 NA non-coding downstream 270292 23255878 ~ 23266654 (-)
LOC120548728 NA non-coding downstream 386715 23135585 ~ 23150231 (-)
LOC120549687 NA non-coding downstream 585886 22950227 ~ 22951060 (-)
LOC120548836 NA non-coding upstream 612784 24186796 ~ 24197384 (-)
G205643 NA non-coding upstream 658630 24232642 ~ 24233109 (-)
LOC120549041 NA non-coding upstream 855962 24429974 ~ 24433833 (-)
G205701 NA non-coding upstream 869807 24443819 ~ 24446396 (-)
G205702 zbtb8a non-coding upstream 901923 24475935 ~ 24476893 (-)
arid1b LOC103368034,LOC102292653,LOC101481705,LOC102196556 other downstream 302148 23024161 ~ 23234798 (-)
LOC120549684 NA other downstream 589136 22944937 ~ 22947810 (-)
G205380 NA other downstream 599089 22910107 ~ 22937857 (-)
LOC120549283 khdrbs1 other downstream 753474 22778005 ~ 22783472 (-)
zbtb42 zbtb42,LOC102793331 other downstream 1089003 22440729 ~ 22447943 (-)
LOC120548654 LOC106573685,LOC106610772 other upstream 133977 23707989 ~ 23710861 (-)
runx3 runx3 other upstream 1041906 24615918 ~ 24664770 (-)
rsrp1 NA other upstream 1178141 24752153 ~ 24755421 (-)
fndc5a fndc5,LOC108237574 other upstream 1269709 24843721 ~ 24877345 (-)
G205845 bsdc1 other upstream 1379194 24953206 ~ 24957041 (-)

Expression


Co-expression Network